RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
PTPRS-204ENST00000587303 KRI1Q8N9T8 703 aaKnown RBP17.11■□□□□ 0.33
PTPRS-204ENST00000587303 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
PTPRS-204ENST00000587303 RAD21O60216 631 aa17.11■□□□□ 0.33
PTPRS-204ENST00000587303 HMMRO75330 724 aa17.11■□□□□ 0.33
PTPRS-204ENST00000587303 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
PTPRS-204ENST00000587303 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
PTPRS-204ENST00000587303 SETD5Q9C0A6 1442 aa17.1■□□□□ 0.33
PTPRS-204ENST00000587303 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
PTPRS-204ENST00000587303 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
PTPRS-204ENST00000587303 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
PTPRS-204ENST00000587303 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
PTPRS-204ENST00000587303 NGEFQ8N5V2 710 aa17.08■□□□□ 0.33
PTPRS-204ENST00000587303 CCDC34Q96HJ3 373 aa17.08■□□□□ 0.33
PTPRS-204ENST00000587303 SLKQ9H2G2 1235 aaPredicted RBP17.08■□□□□ 0.32
PTPRS-204ENST00000587303 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
PTPRS-204ENST00000587303 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
PTPRS-204ENST00000587303 CWC22Q9HCG8 908 aaKnown RBP17.06■□□□□ 0.32
PTPRS-204ENST00000587303 NOL10Q9BSC4 688 aaKnown RBP17.05■□□□□ 0.32
PTPRS-204ENST00000587303 TTC5Q8N0Z6 440 aa17.05■□□□□ 0.32
PTPRS-204ENST00000587303 TPM4P67936 248 aa17.05■□□□□ 0.32
PTPRS-204ENST00000587303 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
PTPRS-204ENST00000587303 PATL2C9JE40 543 aaKnown RBP17.04■□□□□ 0.32
PTPRS-204ENST00000587303 PES1O00541 588 aaKnown RBP17.04■□□□□ 0.32
PTPRS-204ENST00000587303 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
PTPRS-204ENST00000587303 TNNT3P45378 269 aaPredicted RBP17.03■□□□□ 0.32
PTPRS-204ENST00000587303 COG3Q96JB2 828 aa17.03■□□□□ 0.32
PTPRS-204ENST00000587303 RALBP1Q15311 655 aa17.03■□□□□ 0.32
PTPRS-204ENST00000587303 CEP89Q96ST8 783 aa17.03■□□□□ 0.32
PTPRS-204ENST00000587303 PSME1Q06323 249 aa17.02■□□□□ 0.32
PTPRS-204ENST00000587303 JPH4Q96JJ6 628 aa17.02■□□□□ 0.32
PTPRS-204ENST00000587303 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
PTPRS-204ENST00000587303 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.31
PTPRS-204ENST00000587303 TEFQ10587 303 aa17.01■□□□□ 0.31
PTPRS-204ENST00000587303 FMN1Q68DA7 1419 aa17.01■□□□□ 0.31
PTPRS-204ENST00000587303 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
PTPRS-204ENST00000587303 AMOTL1Q8IY63 956 aa17.01■□□□□ 0.31
PTPRS-204ENST00000587303 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
PTPRS-204ENST00000587303 MFAP1P55081 439 aaKnown RBP17■□□□□ 0.31
PTPRS-204ENST00000587303 RRP7AQ9Y3A4 280 aaKnown RBP17■□□□□ 0.31
PTPRS-204ENST00000587303 RCAN3Q9UKA8 241 aa17■□□□□ 0.31
PTPRS-204ENST00000587303 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
PTPRS-204ENST00000587303 CNKSR2Q8WXI2 1034 aa16.99■□□□□ 0.31
PTPRS-204ENST00000587303 PMFBP1Q8TBY8 1022 aa16.99■□□□□ 0.31
PTPRS-204ENST00000587303 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
PTPRS-204ENST00000587303 VPS37DQ86XT2 251 aa16.98■□□□□ 0.31
PTPRS-204ENST00000587303 GBP4Q96PP9 640 aa16.98■□□□□ 0.31
PTPRS-204ENST00000587303 ATF3P18847 181 aa16.98■□□□□ 0.31
PTPRS-204ENST00000587303 AKAP17AQ02040 695 aaKnown RBP16.97■□□□□ 0.31
PTPRS-204ENST00000587303 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
PTPRS-204ENST00000587303 GOLGA6L1Q8N7Z2 621 aa16.97■□□□□ 0.31
PTPRS-204ENST00000587303 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.31
PTPRS-204ENST00000587303 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
PTPRS-204ENST00000587303 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
PTPRS-204ENST00000587303 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
PTPRS-204ENST00000587303 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.3
PTPRS-204ENST00000587303 VGFO15240 615 aaPredicted RBP16.95■□□□□ 0.3
PTPRS-204ENST00000587303 NEXNQ0ZGT2 675 aa16.95■□□□□ 0.3
PTPRS-204ENST00000587303 SF3A1Q15459 793 aaKnown RBP16.95■□□□□ 0.3
PTPRS-204ENST00000587303 SAMD1Q6SPF0 538 aaPredicted RBP16.94■□□□□ 0.3
PTPRS-204ENST00000587303 SYAP1Q96A49 352 aaPredicted RBP16.94■□□□□ 0.3
PTPRS-204ENST00000587303 FOXD4L6Q3SYB3 417 aaPredicted RBP16.94■□□□□ 0.3
PTPRS-204ENST00000587303 FOXD4L3Q6VB84 417 aaPredicted RBP16.94■□□□□ 0.3
PTPRS-204ENST00000587303 KIF16BQ96L93 1317 aa16.93■□□□□ 0.3
PTPRS-204ENST00000587303 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
PTPRS-204ENST00000587303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.92■□□□□ 0.3
PTPRS-204ENST00000587303 RILPL2Q969X0 211 aa16.92■□□□□ 0.3
PTPRS-204ENST00000587303 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
PTPRS-204ENST00000587303 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
PTPRS-204ENST00000587303 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
PTPRS-204ENST00000587303 RBM19Q9Y4C8 960 aaKnown RBP16.92■□□□□ 0.3
PTPRS-204ENST00000587303 CCDC18Q5T9S5 1454 aa16.92■□□□□ 0.3
PTPRS-204ENST00000587303 SYNE3Q6ZMZ3 975 aa16.91■□□□□ 0.3
PTPRS-204ENST00000587303 KIF3AQ9Y496 699 aa16.91■□□□□ 0.3
PTPRS-204ENST00000587303 CSPP1Q1MSJ5 1256 aa16.91■□□□□ 0.3
PTPRS-204ENST00000587303 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
PTPRS-204ENST00000587303 CCAR2Q8N163 923 aaKnown RBP16.91■□□□□ 0.3
PTPRS-204ENST00000587303 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
PTPRS-204ENST00000587303 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
PTPRS-204ENST00000587303 PTMSP20962 102 aa16.9■□□□□ 0.3
PTPRS-204ENST00000587303 WIZO95785 1651 aa16.9■□□□□ 0.3
PTPRS-204ENST00000587303 TPD52L1Q16890 204 aaPredicted RBP16.9■□□□□ 0.3
PTPRS-204ENST00000587303 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
PTPRS-204ENST00000587303 C9orf78Q9NZ63 289 aaPredicted RBP16.9■□□□□ 0.3
PTPRS-204ENST00000587303 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
PTPRS-204ENST00000587303 CCER2I3L3R5 266 aa16.9■□□□□ 0.3
PTPRS-204ENST00000587303 H3BQV1 296 aa16.89■□□□□ 0.29
PTPRS-204ENST00000587303 IFFO2Q5TF58 517 aa16.89■□□□□ 0.29
PTPRS-204ENST00000587303 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
PTPRS-204ENST00000587303 APPP05067 770 aa16.89■□□□□ 0.29
PTPRS-204ENST00000587303 TPM3P06753 285 aa16.88■□□□□ 0.29
PTPRS-204ENST00000587303 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
PTPRS-204ENST00000587303 SF3B2Q13435 895 aaKnown RBP16.87■□□□□ 0.29
PTPRS-204ENST00000587303 LRRFIP1Q32MZ4 808 aaKnown RBP16.87■□□□□ 0.29
PTPRS-204ENST00000587303 FAM184AQ8NB25 1140 aa16.87■□□□□ 0.29
PTPRS-204ENST00000587303 PTPRGP23470 1445 aa16.87■□□□□ 0.29
PTPRS-204ENST00000587303 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
PTPRS-204ENST00000587303 CCDC144AA2RUR9 1427 aa16.85■□□□□ 0.29
PTPRS-204ENST00000587303 PLIN1O60240 522 aa16.84■□□□□ 0.29
PTPRS-204ENST00000587303 RAPGEF4Q8WZA2 1011 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms