RNA–Protein interactions for RNA: ENST00000586817.5

POLR2E-205, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 2,441 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-205ENST00000586817 KIF15Q9NS87 1388 aa30.7■■■□□ 2.5
POLR2E-205ENST00000586817 ARID4BQ4LE39 1312 aaPredicted RBP30.69■■■□□ 2.5
POLR2E-205ENST00000586817 ABCA8O94911 1581 aa30.66■■■□□ 2.5
POLR2E-205ENST00000586817 SHROOM2Q13796 1616 aa30.66■■■□□ 2.5
POLR2E-205ENST00000586817 SHANK2Q9UPX8 1470 aa30.64■■■□□ 2.5
POLR2E-205ENST00000586817 ROCK2O75116 1388 aaKnown RBP30.63■■■□□ 2.49
POLR2E-205ENST00000586817 CCDC136Q96JN2 1154 aa30.63■■■□□ 2.49
POLR2E-205ENST00000586817 SALL2Q9Y467 1007 aaPredicted RBP30.63■■■□□ 2.49
POLR2E-205ENST00000586817 RNF123Q5XPI4 1314 aa30.62■■■□□ 2.49
POLR2E-205ENST00000586817 RGL3Q3MIN7 710 aa30.61■■■□□ 2.49
POLR2E-205ENST00000586817 ARHGEF12Q9NZN5 1544 aa30.6■■■□□ 2.49
POLR2E-205ENST00000586817 KDM5DQ9BY66 1539 aa30.57■■■□□ 2.48
POLR2E-205ENST00000586817 MYBBP1AQ9BQG0 1328 aaKnown RBP30.56■■■□□ 2.48
POLR2E-205ENST00000586817 NBPF1Q3BBV0 1214 aa30.55■■■□□ 2.48
POLR2E-205ENST00000586817 PTPRGP23470 1445 aa30.55■■■□□ 2.48
POLR2E-205ENST00000586817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.55■■■□□ 2.481e-12■□□□□ 9.3
POLR2E-205ENST00000586817 LRPPRCP42704 1394 aaKnown RBP30.52■■■□□ 2.48
POLR2E-205ENST00000586817 FAM135AQ9P2D6 1515 aa30.51■■■□□ 2.47
POLR2E-205ENST00000586817 BRD4O60885 1362 aaPredicted RBP30.5■■■□□ 2.47
POLR2E-205ENST00000586817 SAMD9LQ8IVG5 1584 aa30.49■■■□□ 2.47
POLR2E-205ENST00000586817 RALBP1Q15311 655 aa30.49■■■□□ 2.47
POLR2E-205ENST00000586817 PRKCSHP14314 528 aaPredicted RBP30.47■■■□□ 2.47
POLR2E-205ENST00000586817 CCDC141Q6ZP82 1450 aa30.46■■■□□ 2.47
POLR2E-205ENST00000586817 ARHGEF5Q12774 1597 aa30.46■■■□□ 2.47
POLR2E-205ENST00000586817 PAK3O75914 559 aaPredicted RBP30.45■■■□□ 2.47
POLR2E-205ENST00000586817 CCDC144AA2RUR9 1427 aa30.45■■■□□ 2.47
POLR2E-205ENST00000586817 PRAG1Q86YV5 1406 aa30.44■■■□□ 2.46
POLR2E-205ENST00000586817 E9PCH4 1651 aa30.44■■■□□ 2.46
POLR2E-205ENST00000586817 CDC42BPBQ9Y5S2 1711 aa30.44■■■□□ 2.46
POLR2E-205ENST00000586817 CC2D1BQ5T0F9 858 aaKnown RBP30.41■■■□□ 2.46
POLR2E-205ENST00000586817 EXOC6Q8TAG9 804 aa30.4■■■□□ 2.46
POLR2E-205ENST00000586817 NOP58Q9Y2X3 529 aaKnown RBP30.39■■■□□ 2.46
POLR2E-205ENST00000586817 PLA2R1Q13018 1463 aa30.39■■■□□ 2.46
POLR2E-205ENST00000586817 RRP1P56182 461 aaKnown RBP30.39■■■□□ 2.46
POLR2E-205ENST00000586817 SYCP2Q9BX26 1530 aa30.39■■■□□ 2.46
POLR2E-205ENST00000586817 TRPM1Q7Z4N2 1603 aa30.39■■■□□ 2.45
POLR2E-205ENST00000586817 KTN1Q86UP2 1357 aaKnown RBP30.38■■■□□ 2.45
POLR2E-205ENST00000586817 NLRP13Q86W25 1043 aa30.38■■■□□ 2.45
POLR2E-205ENST00000586817 PER1O15534 1290 aaPredicted RBP30.37■■■□□ 2.45
POLR2E-205ENST00000586817 CDCA7LQ96GN5 454 aa30.37■■■□□ 2.45
POLR2E-205ENST00000586817 PARD3Q8TEW0 1356 aa30.36■■■□□ 2.45
POLR2E-205ENST00000586817 DISP3Q9P2K9 1392 aa30.36■■■□□ 2.45
POLR2E-205ENST00000586817 PREX2Q70Z35 1606 aa30.35■■■□□ 2.45
POLR2E-205ENST00000586817 RCAN3Q9UKA8 241 aa30.35■■■□□ 2.45
POLR2E-205ENST00000586817 A2MP01023 1474 aa30.35■■■□□ 2.45
POLR2E-205ENST00000586817 NBR1Q14596 966 aa30.33■■■□□ 2.45
POLR2E-205ENST00000586817 MYT1LQ9UL68 1186 aa30.33■■■□□ 2.45
POLR2E-205ENST00000586817 ARHGAP5Q13017 1502 aa30.32■■■□□ 2.44
POLR2E-205ENST00000586817 TESK2Q96S53 571 aa30.31■■■□□ 2.44
POLR2E-205ENST00000586817 TTC37Q6PGP7 1564 aa30.3■■■□□ 2.44
POLR2E-205ENST00000586817 PLEKHH2Q8IVE3 1493 aa30.3■■■□□ 2.44
POLR2E-205ENST00000586817 PANK3Q9H999 370 aa30.3■■■□□ 2.44
POLR2E-205ENST00000586817 RSPH4AQ5TD94 716 aa30.28■■■□□ 2.44
POLR2E-205ENST00000586817 PLIN1O60240 522 aa30.25■■■□□ 2.43
POLR2E-205ENST00000586817 ANP32AP39687 249 aaKnown RBP30.25■■■□□ 2.43
POLR2E-205ENST00000586817 COL17A1Q9UMD9 1497 aaPredicted RBP30.24■■■□□ 2.43
POLR2E-205ENST00000586817 GPRASP1Q5JY77 1395 aa30.24■■■□□ 2.43
POLR2E-205ENST00000586817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.23■■■□□ 2.43
POLR2E-205ENST00000586817 TRHP20396 242 aaPredicted RBP30.23■■■□□ 2.43
POLR2E-205ENST00000586817 IPO9Q96P70 1041 aaKnown RBP30.22■■■□□ 2.43
POLR2E-205ENST00000586817 UNC13BO14795 1591 aa30.22■■■□□ 2.43
POLR2E-205ENST00000586817 ERBINQ96RT1 1412 aa30.21■■■□□ 2.43
POLR2E-205ENST00000586817 PRDM15P57071 1507 aaPredicted RBP30.19■■■□□ 2.42
POLR2E-205ENST00000586817 NPM2Q86SE8 214 aaKnown RBP30.19■■■□□ 2.42
POLR2E-205ENST00000586817 MYO5CQ9NQX4 1742 aa30.18■■■□□ 2.42
POLR2E-205ENST00000586817 DEKP35659 375 aaKnown RBP30.17■■■□□ 2.42
POLR2E-205ENST00000586817 PDE3BQ13370 1112 aa30.16■■■□□ 2.42
POLR2E-205ENST00000586817 SKAP1Q86WV1 359 aa30.16■■■□□ 2.42
POLR2E-205ENST00000586817 TMF1P82094 1093 aa30.15■■■□□ 2.42
POLR2E-205ENST00000586817 NPM1P06748 294 aaKnown RBP eCLIP30.15■■■□□ 2.42
POLR2E-205ENST00000586817 MAST1Q9Y2H9 1570 aa30.13■■■□□ 2.41
POLR2E-205ENST00000586817 IQGAP3Q86VI3 1631 aa30.13■■■□□ 2.41
POLR2E-205ENST00000586817 ZBTB47Q9UFB7 747 aaPredicted RBP30.13■■■□□ 2.41
POLR2E-205ENST00000586817 ADAMTS8Q9UP79 889 aa30.08■■■□□ 2.41
POLR2E-205ENST00000586817 BLMP54132 1417 aaPredicted RBP30.08■■■□□ 2.41
POLR2E-205ENST00000586817 CRBNQ96SW2 442 aa30.07■■■□□ 2.4
POLR2E-205ENST00000586817 WASHC2CQ9Y4E1 1318 aa30.07■■■□□ 2.4
POLR2E-205ENST00000586817 PLXNC1O60486 1568 aa30.07■■■□□ 2.4
POLR2E-205ENST00000586817 LAMC1P11047 1609 aa30.06■■■□□ 2.4
POLR2E-205ENST00000586817 PDE4AP27815 886 aa30.06■■■□□ 2.4
POLR2E-205ENST00000586817 DUOX2Q9NRD8 1548 aa30.05■■■□□ 2.4
POLR2E-205ENST00000586817 TCERG1O14776 1098 aaKnown RBP30.04■■■□□ 2.4
POLR2E-205ENST00000586817 C20orf194Q5TEA3 1177 aa30.04■■■□□ 2.4
POLR2E-205ENST00000586817 EIF2AK4Q9P2K8 1649 aaKnown RBP30.03■■■□□ 2.4
POLR2E-205ENST00000586817 ABCC2Q92887 1545 aa30.03■■■□□ 2.4
POLR2E-205ENST00000586817 MAGI2Q86UL8 1455 aa30.03■■■□□ 2.4
POLR2E-205ENST00000586817 TRAPPC8Q9Y2L5 1435 aa30■■■□□ 2.39
POLR2E-205ENST00000586817 ATP10AO60312 1499 aa29.99■■■□□ 2.39
POLR2E-205ENST00000586817 KNSTRNQ9Y448 316 aa29.98■■■□□ 2.39
POLR2E-205ENST00000586817 PPP2R1AP30153 589 aa29.97■■■□□ 2.39
POLR2E-205ENST00000586817 BACH2Q9BYV9 841 aa29.97■■■□□ 2.39
POLR2E-205ENST00000586817 WDR7Q9Y4E6 1490 aa29.97■■■□□ 2.39
POLR2E-205ENST00000586817 AFAP1Q8N556 730 aa29.96■■■□□ 2.39
POLR2E-205ENST00000586817 EFCAB2Q5VUJ9 269 aa29.95■■■□□ 2.39
POLR2E-205ENST00000586817 UHRF1BP1LA0JNW5 1464 aa29.95■■■□□ 2.39
POLR2E-205ENST00000586817 PLEKHH1Q9ULM0 1364 aa29.94■■■□□ 2.38
POLR2E-205ENST00000586817 ZMYM4Q5VZL5 1548 aa29.94■■■□□ 2.38
POLR2E-205ENST00000586817 PLCH2O75038 1416 aa29.94■■■□□ 2.38
POLR2E-205ENST00000586817 RNF17Q9BXT8 1623 aaKnown RBP29.94■■■□□ 2.38
POLR2E-205ENST00000586817 FAM69CQ0P6D2 419 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms