RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 CD109Q6YHK3 1445 aa15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 TSPY4P0CV99 314 aa15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 TSPY10P0CW01 314 aa15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 ANP32AP39687 249 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 SAMD9LQ8IVG5 1584 aa15.97■□□□□ 0.15
CDK5RAP3-232ENST00000584168 EFCAB2Q5VUJ9 269 aa15.97■□□□□ 0.15
CDK5RAP3-232ENST00000584168 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.15
CDK5RAP3-232ENST00000584168 CFAP74Q9C0B2 1584 aa15.96■□□□□ 0.15
CDK5RAP3-232ENST00000584168 HFM1A2PYH4 1435 aa15.96■□□□□ 0.15
CDK5RAP3-232ENST00000584168 FAM69CQ0P6D2 419 aa15.95■□□□□ 0.14
CDK5RAP3-232ENST00000584168 DNMT1P26358 1616 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-232ENST00000584168 FANCAO15360 1455 aa15.94■□□□□ 0.14
CDK5RAP3-232ENST00000584168 KIAA1107Q9UPP5 1409 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 SYCP2Q9BX26 1530 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 ARHGEF5Q12774 1597 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 KIF13AQ9H1H9 1805 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-232ENST00000584168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.142e-7■■□□□ 13.4
CDK5RAP3-232ENST00000584168 ABCC1P33527 1531 aa15.92■□□□□ 0.14
CDK5RAP3-232ENST00000584168 GSE1Q14687 1217 aa15.91■□□□□ 0.14
CDK5RAP3-232ENST00000584168 HSP90AA1P07900 732 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-232ENST00000584168 MBD5Q9P267 1494 aa15.91■□□□□ 0.14
CDK5RAP3-232ENST00000584168 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
CDK5RAP3-232ENST00000584168 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 AKNAQ7Z591 1439 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 CROCC2H7BZ55 1655 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 RSPH4AQ5TD94 716 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 NAP1L2Q9ULW6 460 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 NCOA1Q15788 1441 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 NEO1Q92859 1461 aa15.89■□□□□ 0.13
CDK5RAP3-232ENST00000584168 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-232ENST00000584168 CCDC141Q6ZP82 1450 aa15.88■□□□□ 0.13
CDK5RAP3-232ENST00000584168 RAPGEF3O95398 923 aa15.88■□□□□ 0.13
CDK5RAP3-232ENST00000584168 MPHOSPH9Q99550 1183 aa15.88■□□□□ 0.13
CDK5RAP3-232ENST00000584168 PRDM4Q9UKN5 801 aa15.88■□□□□ 0.13
CDK5RAP3-232ENST00000584168 SHANK2Q9UPX8 1470 aa15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ADGRL1O94910 1474 aa15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 IRX6P78412 446 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 TEX14Q8IWB6 1497 aa15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ANKRD30AQ9BXX3 1397 aa15.86■□□□□ 0.13
CDK5RAP3-232ENST00000584168 KIF15Q9NS87 1388 aa15.85■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ADGBQ8N7X0 1667 aa15.85■□□□□ 0.13
CDK5RAP3-232ENST00000584168 TSPOAP1O95153 1857 aa15.85■□□□□ 0.13
CDK5RAP3-232ENST00000584168 BBXQ8WY36 941 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ROCK1Q13464 1354 aa15.84■□□□□ 0.13
CDK5RAP3-232ENST00000584168 SCAPERQ9BY12 1400 aa15.84■□□□□ 0.13
CDK5RAP3-232ENST00000584168 MAST1Q9Y2H9 1570 aa15.84■□□□□ 0.13
CDK5RAP3-232ENST00000584168 CALD1Q05682 793 aaKnown RBP15.83■□□□□ 0.13
CDK5RAP3-232ENST00000584168 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ADGRL2O95490 1459 aa15.83■□□□□ 0.12
CDK5RAP3-232ENST00000584168 SPAG9O60271 1321 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-232ENST00000584168 ANKRD50Q9ULJ7 1429 aa15.82■□□□□ 0.12
CDK5RAP3-232ENST00000584168 ZNF326Q5BKZ1 582 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-232ENST00000584168 PPM1GO15355 546 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 HIRIP3Q9BW71 556 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 CHMP4BQ9H444 224 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 RGS3P49796 1198 aa15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 NUP155O75694 1391 aa15.8■□□□□ 0.12
CDK5RAP3-232ENST00000584168 GCC2Q8IWJ2 1684 aa15.8■□□□□ 0.12
CDK5RAP3-232ENST00000584168 DENND4BO75064 1496 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-232ENST00000584168 ZNF518AQ6AHZ1 1483 aa15.8■□□□□ 0.12
CDK5RAP3-232ENST00000584168 POGZQ7Z3K3 1410 aa15.79■□□□□ 0.12
CDK5RAP3-232ENST00000584168 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-232ENST00000584168 PKD2Q13563 968 aa15.79■□□□□ 0.12
CDK5RAP3-232ENST00000584168 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-232ENST00000584168 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.12
CDK5RAP3-232ENST00000584168 FRAT1Q92837 279 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-232ENST00000584168 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.11
CDK5RAP3-232ENST00000584168 PLXNC1O60486 1568 aa15.77■□□□□ 0.11
CDK5RAP3-232ENST00000584168 KDM5CP41229 1560 aa15.76■□□□□ 0.11
CDK5RAP3-232ENST00000584168 ZFYVE16Q7Z3T8 1539 aa15.75■□□□□ 0.11
CDK5RAP3-232ENST00000584168 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
CDK5RAP3-232ENST00000584168 RICTORQ6R327 1708 aa15.75■□□□□ 0.11
CDK5RAP3-232ENST00000584168 IPO4Q8TEX9 1081 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-232ENST00000584168 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-232ENST00000584168 ATP7AQ04656 1500 aa15.74■□□□□ 0.11
CDK5RAP3-232ENST00000584168 KIF3BO15066 747 aa15.73■□□□□ 0.11
CDK5RAP3-232ENST00000584168 BRD2P25440 801 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-232ENST00000584168 DHX37Q8IY37 1157 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-232ENST00000584168 CENPJQ9HC77 1338 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-232ENST00000584168 B4GALNT3Q6L9W6 998 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 HECW2Q9P2P5 1572 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 ANP32CO43423 234 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 MLH3Q9UHC1 1453 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 FRMPD1Q5SYB0 1578 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
CDK5RAP3-232ENST00000584168 PZPP20742 1482 aa15.71■□□□□ 0.1
CDK5RAP3-232ENST00000584168 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.1
CDK5RAP3-232ENST00000584168 KIDINS220Q9ULH0 1771 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 DUOX2Q9NRD8 1548 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 ZMYM4Q5VZL5 1548 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 GGT6Q6P531 493 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms