RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
SKA2-207ENST00000583380 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.5
SKA2-207ENST00000583380 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
SKA2-207ENST00000583380 RBM25P49756 843 aaKnown RBP11.9□□□□□ -0.5
SKA2-207ENST00000583380 AXDND1Q5T1B0 1012 aaPredicted RBP11.9□□□□□ -0.5
SKA2-207ENST00000583380 KDM2BQ8NHM5 1336 aa11.89□□□□□ -0.51
SKA2-207ENST00000583380 CCDC66A2RUB6 948 aa11.89□□□□□ -0.51
SKA2-207ENST00000583380 EXOC6Q8TAG9 804 aa11.89□□□□□ -0.51
SKA2-207ENST00000583380 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
SKA2-207ENST00000583380 TRAK2O60296 914 aa11.88□□□□□ -0.51
SKA2-207ENST00000583380 SASS6Q6UVJ0 657 aa11.88□□□□□ -0.51
SKA2-207ENST00000583380 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
SKA2-207ENST00000583380 PNISRQ8TF01 805 aaKnown RBP11.88□□□□□ -0.51
SKA2-207ENST00000583380 PRIMPOLQ96LW4 560 aa11.88□□□□□ -0.51
SKA2-207ENST00000583380 GBP4Q96PP9 640 aa11.88□□□□□ -0.51
SKA2-207ENST00000583380 C8orf34Q49A92 452 aa11.87□□□□□ -0.51
SKA2-207ENST00000583380 ANTXR1Q9H6X2 564 aa11.87□□□□□ -0.51
SKA2-207ENST00000583380 VIRMAQ69YN4 1812 aaKnown RBP11.87□□□□□ -0.51
SKA2-207ENST00000583380 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
SKA2-207ENST00000583380 CLGNO14967 610 aa11.86□□□□□ -0.51
SKA2-207ENST00000583380 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
SKA2-207ENST00000583380 PDCL2Q8N4E4 241 aa11.86□□□□□ -0.51
SKA2-207ENST00000583380 ARHGAP35Q9NRY4 1499 aa11.85□□□□□ -0.51
SKA2-207ENST00000583380 GOLGA6L22H0YM25 854 aa11.85□□□□□ -0.51
SKA2-207ENST00000583380 ZSCAN20P17040 1043 aaPredicted RBP11.85□□□□□ -0.51
SKA2-207ENST00000583380 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
SKA2-207ENST00000583380 FAM13BQ9NYF5 915 aa11.85□□□□□ -0.51
SKA2-207ENST00000583380 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
SKA2-207ENST00000583380 DNTTIP2Q5QJE6 756 aaKnown RBP11.84□□□□□ -0.51
SKA2-207ENST00000583380 FEZ1Q99689 392 aa11.84□□□□□ -0.51
SKA2-207ENST00000583380 KDM5BQ9UGL1 1544 aa11.83□□□□□ -0.52
SKA2-207ENST00000583380 RIPK4P57078 832 aa11.83□□□□□ -0.52
SKA2-207ENST00000583380 YY1AP1Q9H869 796 aa11.83□□□□□ -0.52
SKA2-207ENST00000583380 NOL7Q9UMY1 257 aaKnown RBP11.83□□□□□ -0.52
SKA2-207ENST00000583380 CFAP43Q8NDM7 1665 aa11.82□□□□□ -0.52
SKA2-207ENST00000583380 IRX3P78415 501 aaPredicted RBP11.82□□□□□ -0.52
SKA2-207ENST00000583380 NGEFQ8N5V2 710 aa11.82□□□□□ -0.52
SKA2-207ENST00000583380 TMEM51Q9NW97 253 aa11.82□□□□□ -0.52
SKA2-207ENST00000583380 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
SKA2-207ENST00000583380 NBPF1Q3BBV0 1214 aa11.81□□□□□ -0.52
SKA2-207ENST00000583380 SMARCA4P51532 1647 aa11.81□□□□□ -0.52
SKA2-207ENST00000583380 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
SKA2-207ENST00000583380 MYBBP1AQ9BQG0 1328 aaKnown RBP11.81□□□□□ -0.52
SKA2-207ENST00000583380 SPATA31E1Q6ZUB1 1445 aa11.8□□□□□ -0.52
SKA2-207ENST00000583380 UQCRHLA0A096LP55 91 aa11.8□□□□□ -0.52
SKA2-207ENST00000583380 UQCRHP07919 91 aa11.8□□□□□ -0.52
SKA2-207ENST00000583380 HSP90B1P14625 803 aaKnown RBP11.8□□□□□ -0.52
SKA2-207ENST00000583380 HIRIP3Q9BW71 556 aaPredicted RBP11.8□□□□□ -0.52
SKA2-207ENST00000583380 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.52
SKA2-207ENST00000583380 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
SKA2-207ENST00000583380 GTF2F1P35269 517 aaKnown RBP eCLIP11.79□□□□□ -0.521e-8■■■■■ 31.9
SKA2-207ENST00000583380 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
SKA2-207ENST00000583380 CCDC39Q9UFE4 941 aa11.79□□□□□ -0.52
SKA2-207ENST00000583380 KIF3AQ9Y496 699 aa11.79□□□□□ -0.52
SKA2-207ENST00000583380 KIAA1107Q9UPP5 1409 aa11.78□□□□□ -0.52
SKA2-207ENST00000583380 CCDC184Q52MB2 194 aa11.78□□□□□ -0.52
SKA2-207ENST00000583380 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
SKA2-207ENST00000583380 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
SKA2-207ENST00000583380 DHX29Q7Z478 1369 aaKnown RBP11.78□□□□□ -0.52
SKA2-207ENST00000583380 SLC4A3P48751 1232 aa11.77□□□□□ -0.53
SKA2-207ENST00000583380 NASPP49321 788 aaPredicted RBP11.77□□□□□ -0.53
SKA2-207ENST00000583380 FAM50AQ14320 339 aaKnown RBP11.77□□□□□ -0.53
SKA2-207ENST00000583380 ZNF622Q969S3 477 aaKnown RBP eCLIP11.77□□□□□ -0.53
SKA2-207ENST00000583380 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
SKA2-207ENST00000583380 PTPN23Q9H3S7 1636 aa11.77□□□□□ -0.53
SKA2-207ENST00000583380 KIF7Q2M1P5 1343 aa11.77□□□□□ -0.53
SKA2-207ENST00000583380 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
SKA2-207ENST00000583380 CUX1P39880 1505 aa11.76□□□□□ -0.53
SKA2-207ENST00000583380 MYRIPQ8NFW9 859 aa11.76□□□□□ -0.53
SKA2-207ENST00000583380 EFCC1Q9HA90 598 aa11.76□□□□□ -0.53
SKA2-207ENST00000583380 CALCOCO1Q9P1Z2 691 aa11.76□□□□□ -0.53
SKA2-207ENST00000583380 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
SKA2-207ENST00000583380 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
SKA2-207ENST00000583380 PTMAP06454 111 aaKnown RBP11.75□□□□□ -0.53
SKA2-207ENST00000583380 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
SKA2-207ENST00000583380 MMP14P50281 582 aa11.75□□□□□ -0.53
SKA2-207ENST00000583380 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
SKA2-207ENST00000583380 NLRP13Q86W25 1043 aa11.75□□□□□ -0.53
SKA2-207ENST00000583380 PANK2Q9BZ23 570 aa11.75□□□□□ -0.53
SKA2-207ENST00000583380 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
SKA2-207ENST00000583380 CLEC17AQ6ZS10 378 aa11.74□□□□□ -0.53
SKA2-207ENST00000583380 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
SKA2-207ENST00000583380 ZHX1Q9UKY1 873 aaPredicted RBP11.74□□□□□ -0.53
SKA2-207ENST00000583380 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
SKA2-207ENST00000583380 R3HCC1Q9Y3T6 440 aaKnown RBP11.74□□□□□ -0.53
SKA2-207ENST00000583380 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
SKA2-207ENST00000583380 SYCP1Q15431 976 aa11.73□□□□□ -0.53
SKA2-207ENST00000583380 ARHGAP31Q2M1Z3 1444 aa11.73□□□□□ -0.53
SKA2-207ENST00000583380 GEMIN8Q9NWZ8 242 aaKnown RBP11.73□□□□□ -0.53
SKA2-207ENST00000583380 FYCO1Q9BQS8 1478 aa11.72□□□□□ -0.53
SKA2-207ENST00000583380 TIGD1Q96MW7 591 aa11.72□□□□□ -0.53
SKA2-207ENST00000583380 CRBNQ96SW2 442 aa11.72□□□□□ -0.53
SKA2-207ENST00000583380 YEATS2Q9ULM3 1422 aa11.71□□□□□ -0.53
SKA2-207ENST00000583380 ZNF445P59923 1031 aa11.71□□□□□ -0.53
SKA2-207ENST00000583380 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
SKA2-207ENST00000583380 HSCBQ8IWL3 235 aa11.71□□□□□ -0.53
SKA2-207ENST00000583380 CEP120Q8N960 986 aa11.71□□□□□ -0.53
SKA2-207ENST00000583380 SNX21Q969T3 373 aa11.71□□□□□ -0.53
SKA2-207ENST00000583380 PDLIM2Q96JY6 352 aa11.71□□□□□ -0.53
SKA2-207ENST00000583380 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms