RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 KIDINS220Q9ULH0 1771 aa21.1■□□□□ 0.97
MKS1-211ENST00000581761 DIP2CQ9Y2E4 1556 aa21.1■□□□□ 0.97
MKS1-211ENST00000581761 ABCA6Q8N139 1617 aa21.09■□□□□ 0.97
MKS1-211ENST00000581761 FOXD1Q16676 465 aa21.07■□□□□ 0.96
MKS1-211ENST00000581761 KDM5DQ9BY66 1539 aa21.06■□□□□ 0.96
MKS1-211ENST00000581761 INO80Q9ULG1 1556 aaPredicted RBP21.06■□□□□ 0.96
MKS1-211ENST00000581761 ATP7AQ04656 1500 aa21.05■□□□□ 0.96
MKS1-211ENST00000581761 NUP155O75694 1391 aa21.05■□□□□ 0.96
MKS1-211ENST00000581761 ANKRD30BQ9BXX2 1392 aa21.05■□□□□ 0.96
MKS1-211ENST00000581761 PPP1R15AO75807 674 aaPredicted RBP21.04■□□□□ 0.96
MKS1-211ENST00000581761 DUOX2Q9NRD8 1548 aa21.04■□□□□ 0.96
MKS1-211ENST00000581761 DIEXFQ68CQ4 756 aaKnown RBP21.03■□□□□ 0.96
MKS1-211ENST00000581761 BCORL1Q5H9F3 1711 aa21.03■□□□□ 0.96
MKS1-211ENST00000581761 RTEL1-TNFRSF6BF6WH68 1400 aa21.03■□□□□ 0.96
MKS1-211ENST00000581761 ADAMTSL3P82987 1691 aa21.02■□□□□ 0.96
MKS1-211ENST00000581761 REREQ9P2R6 1566 aa21.01■□□□□ 0.95
MKS1-211ENST00000581761 ERBINQ96RT1 1412 aa20.99■□□□□ 0.95
MKS1-211ENST00000581761 PKD2Q13563 968 aa20.99■□□□□ 0.95
MKS1-211ENST00000581761 MLECQ14165 292 aa20.99■□□□□ 0.95
MKS1-211ENST00000581761 UNC13BO14795 1591 aa20.98■□□□□ 0.95
MKS1-211ENST00000581761 MADDQ8WXG6 1647 aa20.97■□□□□ 0.95
MKS1-211ENST00000581761 PTPRMP28827 1452 aa20.97■□□□□ 0.95
MKS1-211ENST00000581761 A2MP01023 1474 aa20.96■□□□□ 0.95
MKS1-211ENST00000581761 RPRD2Q5VT52 1461 aaKnown RBP20.96■□□□□ 0.95
MKS1-211ENST00000581761 AGLP35573 1532 aa20.96■□□□□ 0.95
MKS1-211ENST00000581761 FAM135AQ9P2D6 1515 aa20.94■□□□□ 0.94
MKS1-211ENST00000581761 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
MKS1-211ENST00000581761 RIMS1Q86UR5 1692 aaKnown RBP20.91■□□□□ 0.94
MKS1-211ENST00000581761 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
MKS1-211ENST00000581761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.9■□□□□ 0.941e-8■■■■■ 27.4
MKS1-211ENST00000581761 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.93
MKS1-211ENST00000581761 L3MBTL2Q969R5 705 aa20.88■□□□□ 0.93
MKS1-211ENST00000581761 FER1L4A9Z1Z3 1794 aa20.84■□□□□ 0.93
MKS1-211ENST00000581761 KIF3BO15066 747 aa20.83■□□□□ 0.93
MKS1-211ENST00000581761 GGT6Q6P531 493 aa20.83■□□□□ 0.93
MKS1-211ENST00000581761 EIF2AK4Q9P2K8 1649 aaKnown RBP20.8■□□□□ 0.92
MKS1-211ENST00000581761 CEBPAP49715 358 aaPredicted RBP20.8■□□□□ 0.92
MKS1-211ENST00000581761 DEPDC5O75140 1603 aa20.78■□□□□ 0.92
MKS1-211ENST00000581761 KANK1Q14678 1352 aa20.76■□□□□ 0.91
MKS1-211ENST00000581761 CCDC144AA2RUR9 1427 aa20.74■□□□□ 0.91
MKS1-211ENST00000581761 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
MKS1-211ENST00000581761 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
MKS1-211ENST00000581761 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
MKS1-211ENST00000581761 CNTLNQ9NXG0 1405 aa20.72■□□□□ 0.91
MKS1-211ENST00000581761 PLA2R1Q13018 1463 aa20.72■□□□□ 0.91
MKS1-211ENST00000581761 LMTK3Q96Q04 1460 aa20.72■□□□□ 0.91
MKS1-211ENST00000581761 VWDEQ8N2E2 1590 aa20.72■□□□□ 0.91
MKS1-211ENST00000581761 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
MKS1-211ENST00000581761 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
MKS1-211ENST00000581761 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
MKS1-211ENST00000581761 MROH1Q8NDA8 1641 aa20.71■□□□□ 0.91
MKS1-211ENST00000581761 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
MKS1-211ENST00000581761 TET3O43151 1660 aa20.7■□□□□ 0.9
MKS1-211ENST00000581761 CLTCQ00610 1675 aaKnown RBP20.69■□□□□ 0.9
MKS1-211ENST00000581761 E9PCH4 1651 aa20.68■□□□□ 0.9
MKS1-211ENST00000581761 C3P01024 1663 aa20.68■□□□□ 0.9
MKS1-211ENST00000581761 WASHC2CQ9Y4E1 1318 aa20.68■□□□□ 0.9
MKS1-211ENST00000581761 HSPA5P11021 654 aaKnown RBP20.67■□□□□ 0.9
MKS1-211ENST00000581761 HSPA2P54652 639 aa20.67■□□□□ 0.9
MKS1-211ENST00000581761 MIER1Q8N108 512 aa20.67■□□□□ 0.9
MKS1-211ENST00000581761 EIF4G2P78344 907 aaKnown RBP eCLIP20.66■□□□□ 0.9
MKS1-211ENST00000581761 MROH2AA6NES4 1674 aa20.65■□□□□ 0.9
MKS1-211ENST00000581761 UHRF1BP1Q6BDS2 1440 aa20.65■□□□□ 0.9
MKS1-211ENST00000581761 ZNF326Q5BKZ1 582 aaKnown RBP20.65■□□□□ 0.9
MKS1-211ENST00000581761 ABCC3O15438 1527 aa20.63■□□□□ 0.89
MKS1-211ENST00000581761 FBXO31Q5XUX0 539 aaPredicted RBP20.62■□□□□ 0.89
MKS1-211ENST00000581761 TRPM2O94759 1503 aa20.62■□□□□ 0.89
MKS1-211ENST00000581761 LMTK2Q8IWU2 1503 aa20.62■□□□□ 0.89
MKS1-211ENST00000581761 PTPRTO14522 1441 aa20.61■□□□□ 0.89
MKS1-211ENST00000581761 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
MKS1-211ENST00000581761 PREX1Q8TCU6 1659 aa20.61■□□□□ 0.89
MKS1-211ENST00000581761 DCAF11Q8TEB1 546 aa20.61■□□□□ 0.89
MKS1-211ENST00000581761 KDM2AQ9Y2K7 1162 aa20.6■□□□□ 0.89
MKS1-211ENST00000581761 EFCAB6Q5THR3 1501 aa20.59■□□□□ 0.89
MKS1-211ENST00000581761 RALGAPBQ86X10 1494 aa20.59■□□□□ 0.89
MKS1-211ENST00000581761 DDX10Q13206 875 aaKnown RBP20.59■□□□□ 0.89
MKS1-211ENST00000581761 NPATQ14207 1427 aa20.59■□□□□ 0.89
MKS1-211ENST00000581761 CEP152O94986 1710 aa20.58■□□□□ 0.89
MKS1-211ENST00000581761 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
MKS1-211ENST00000581761 SETD1BQ9UPS6 1966 aaKnown RBP20.56■□□□□ 0.88
MKS1-211ENST00000581761 CLTCL1P53675 1640 aa20.55■□□□□ 0.88
MKS1-211ENST00000581761 ZC3H13Q5T200 1668 aaKnown RBP20.54■□□□□ 0.88
MKS1-211ENST00000581761 SPATA31E1Q6ZUB1 1445 aa20.53■□□□□ 0.88
MKS1-211ENST00000581761 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
MKS1-211ENST00000581761 CAMSAP1Q5T5Y3 1602 aa20.52■□□□□ 0.88
MKS1-211ENST00000581761 ARHGAP31Q2M1Z3 1444 aa20.51■□□□□ 0.87
MKS1-211ENST00000581761 USP47Q96K76 1375 aa20.5■□□□□ 0.87
MKS1-211ENST00000581761 TNRQ92752 1358 aa20.49■□□□□ 0.87
MKS1-211ENST00000581761 ILDR1Q86SU0 546 aaPredicted RBP20.49■□□□□ 0.87
MKS1-211ENST00000581761 CARD11Q9BXL7 1154 aa20.49■□□□□ 0.87
MKS1-211ENST00000581761 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
MKS1-211ENST00000581761 WASHC2AQ641Q2 1341 aa20.48■□□□□ 0.87
MKS1-211ENST00000581761 SPATA31D1Q6ZQQ2 1576 aa20.47■□□□□ 0.87
MKS1-211ENST00000581761 TRPM1Q7Z4N2 1603 aa20.47■□□□□ 0.87
MKS1-211ENST00000581761 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
MKS1-211ENST00000581761 MYO3AQ8NEV4 1616 aa20.45■□□□□ 0.87
MKS1-211ENST00000581761 NEURL4Q96JN8 1562 aa20.45■□□□□ 0.86
MKS1-211ENST00000581761 UGGT1Q9NYU2 1555 aa20.45■□□□□ 0.86
MKS1-211ENST00000581761 CCDC7Q96M83 1385 aa20.45■□□□□ 0.86
MKS1-211ENST00000581761 KIF1BO60333 1816 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms