RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 OS9Q13438 667 aaPredicted RBP9.27□□□□□ -0.93
CMTM4-205ENST00000581487 GBP4Q96PP9 640 aa9.27□□□□□ -0.93
CMTM4-205ENST00000581487 EXOC6Q8TAG9 804 aa9.26□□□□□ -0.93
CMTM4-205ENST00000581487 MYBBP1AQ9BQG0 1328 aaKnown RBP9.26□□□□□ -0.93
CMTM4-205ENST00000581487 ANKRD30AQ9BXX3 1397 aa9.26□□□□□ -0.93
CMTM4-205ENST00000581487 ZNF526Q8TF50 670 aaPredicted RBP9.25□□□□□ -0.93
CMTM4-205ENST00000581487 CHMP4BQ9H444 224 aaKnown RBP9.25□□□□□ -0.93
CMTM4-205ENST00000581487 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
CMTM4-205ENST00000581487 MORC1Q86VD1 984 aa9.25□□□□□ -0.93
CMTM4-205ENST00000581487 KIF21BO75037 1637 aa9.25□□□□□ -0.93
CMTM4-205ENST00000581487 ATAD2BQ9ULI0 1458 aa9.25□□□□□ -0.93
CMTM4-205ENST00000581487 HMMRO75330 724 aa9.25□□□□□ -0.93
CMTM4-205ENST00000581487 RRP1P56182 461 aaKnown RBP9.25□□□□□ -0.93
CMTM4-205ENST00000581487 TCEAL9Q9UHQ7 104 aa9.25□□□□□ -0.93
CMTM4-205ENST00000581487 CREBRFQ8IUR6 639 aa9.24□□□□□ -0.93
CMTM4-205ENST00000581487 KIF15Q9NS87 1388 aa9.24□□□□□ -0.93
CMTM4-205ENST00000581487 PDS5BQ9NTI5 1447 aa9.24□□□□□ -0.93
CMTM4-205ENST00000581487 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
CMTM4-205ENST00000581487 CCDC18Q5T9S5 1454 aa9.24□□□□□ -0.93
CMTM4-205ENST00000581487 RWDD1Q9H446 243 aaPredicted RBP9.23□□□□□ -0.93
CMTM4-205ENST00000581487 ST20-MTHFSA0A0A6YYL1 179 aa9.23□□□□□ -0.93
CMTM4-205ENST00000581487 CADPSQ9ULU8 1353 aa9.22□□□□□ -0.93
CMTM4-205ENST00000581487 CBX1P83916 185 aa9.22□□□□□ -0.93
CMTM4-205ENST00000581487 MARCH6O60337 910 aa9.21□□□□□ -0.93
CMTM4-205ENST00000581487 RASSF8Q8NHQ8 419 aa9.21□□□□□ -0.93
CMTM4-205ENST00000581487 SLC4A3P48751 1232 aa9.21□□□□□ -0.93
CMTM4-205ENST00000581487 IGF1RP08069 1367 aa9.21□□□□□ -0.94
CMTM4-205ENST00000581487 PLIN1O60240 522 aa9.21□□□□□ -0.94
CMTM4-205ENST00000581487 MAPK8IP2Q13387 824 aaPredicted RBP9.21□□□□□ -0.94
CMTM4-205ENST00000581487 CTDP1Q9Y5B0 961 aaPredicted RBP9.21□□□□□ -0.94
CMTM4-205ENST00000581487 RRBP1Q9P2E9 1410 aaKnown RBP9.21□□□□□ -0.94
CMTM4-205ENST00000581487 CCDC7Q96M83 1385 aa9.21□□□□□ -0.94
CMTM4-205ENST00000581487 POGKQ9P215 609 aa9.2□□□□□ -0.94
CMTM4-205ENST00000581487 KIF7Q2M1P5 1343 aa9.2□□□□□ -0.94
CMTM4-205ENST00000581487 TPM3P06753 285 aa9.19□□□□□ -0.94
CMTM4-205ENST00000581487 USP47Q96K76 1375 aa9.19□□□□□ -0.94
CMTM4-205ENST00000581487 FAM161AQ3B820 660 aa9.19□□□□□ -0.94
CMTM4-205ENST00000581487 CENPQQ7L2Z9 268 aaPredicted RBP9.19□□□□□ -0.94
CMTM4-205ENST00000581487 PMFBP1Q8TBY8 1022 aa9.19□□□□□ -0.94
CMTM4-205ENST00000581487 SMARCA4P51532 1647 aa9.19□□□□□ -0.94
CMTM4-205ENST00000581487 NEFHP12036 1026 aa9.19□□□□□ -0.94
CMTM4-205ENST00000581487 CNTLNQ9NXG0 1405 aa9.19□□□□□ -0.94
CMTM4-205ENST00000581487 CCDC146Q8IYE0 955 aa9.19□□□□□ -0.94
CMTM4-205ENST00000581487 WASHC2AQ641Q2 1341 aa9.18□□□□□ -0.94
CMTM4-205ENST00000581487 NOM1Q5C9Z4 860 aaKnown RBP9.18□□□□□ -0.94
CMTM4-205ENST00000581487 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.18□□□□□ -0.94
CMTM4-205ENST00000581487 CRBNQ96SW2 442 aa9.18□□□□□ -0.94
CMTM4-205ENST00000581487 UACAQ9BZF9 1416 aa9.18□□□□□ -0.94
CMTM4-205ENST00000581487 CENPJQ9HC77 1338 aaPredicted RBP9.18□□□□□ -0.94
CMTM4-205ENST00000581487 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
CMTM4-205ENST00000581487 TEX35Q5T0J7 233 aa9.18□□□□□ -0.94
CMTM4-205ENST00000581487 MFAP1P55081 439 aaKnown RBP9.18□□□□□ -0.94
CMTM4-205ENST00000581487 PHF14O94880 888 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 U2AF1L5P0DN76 240 aaPredicted RBP9.17□□□□□ -0.94
CMTM4-205ENST00000581487 U2AF1Q01081 240 aaKnown RBP eCLIP9.17□□□□□ -0.94
CMTM4-205ENST00000581487 ITPRIPQ8IWB1 547 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 FAM43AQ8N2R8 423 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 KANK1Q14678 1352 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 RBM10P98175 930 aaKnown RBP9.17□□□□□ -0.94
CMTM4-205ENST00000581487 IPO8O15397 1037 aaKnown RBP9.17□□□□□ -0.94
CMTM4-205ENST00000581487 MLECQ14165 292 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 PANK3Q9H999 370 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 PLCD4Q9BRC7 762 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 TPM2P07951 284 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 CLUAP1Q96AJ1 413 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 MAP7D2Q96T17 732 aa9.17□□□□□ -0.94
CMTM4-205ENST00000581487 SYAP1Q96A49 352 aaPredicted RBP9.16□□□□□ -0.94
CMTM4-205ENST00000581487 HMGN5P82970 282 aaKnown RBP9.16□□□□□ -0.94
CMTM4-205ENST00000581487 ARAP1Q96P48 1450 aa9.16□□□□□ -0.94
CMTM4-205ENST00000581487 CALD1Q05682 793 aaKnown RBP9.16□□□□□ -0.94
CMTM4-205ENST00000581487 NEXNQ0ZGT2 675 aa9.16□□□□□ -0.94
CMTM4-205ENST00000581487 LRRC9Q6ZRR7 1453 aa9.15□□□□□ -0.94
CMTM4-205ENST00000581487 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.94
CMTM4-205ENST00000581487 CARMIL2Q6F5E8 1435 aa9.15□□□□□ -0.94
CMTM4-205ENST00000581487 R3HCC1Q9Y3T6 440 aaKnown RBP9.15□□□□□ -0.95
CMTM4-205ENST00000581487 SRPK2P78362 688 aaKnown RBP9.15□□□□□ -0.95
CMTM4-205ENST00000581487 CCDC66A2RUB6 948 aa9.14□□□□□ -0.95
CMTM4-205ENST00000581487 ZRSR2Q15696 482 aaKnown RBP9.14□□□□□ -0.95
CMTM4-205ENST00000581487 ODF2Q5BJF6 829 aa9.14□□□□□ -0.95
CMTM4-205ENST00000581487 RRP9O43818 475 aaKnown RBP9.14□□□□□ -0.95
CMTM4-205ENST00000581487 MYOM3Q5VTT5 1437 aa9.14□□□□□ -0.95
CMTM4-205ENST00000581487 SAFB2Q14151 953 aaKnown RBP eCLIP9.14□□□□□ -0.95
CMTM4-205ENST00000581487 MTERF4Q7Z6M4 381 aaKnown RBP9.14□□□□□ -0.95
CMTM4-205ENST00000581487 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
CMTM4-205ENST00000581487 EIF3AQ14152 1382 aaKnown RBP9.13□□□□□ -0.95
CMTM4-205ENST00000581487 CSPP1Q1MSJ5 1256 aa9.13□□□□□ -0.95
CMTM4-205ENST00000581487 CCDC70Q6NSX1 233 aa9.13□□□□□ -0.95
CMTM4-205ENST00000581487 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
CMTM4-205ENST00000581487 CCDC34Q96HJ3 373 aa9.13□□□□□ -0.95
CMTM4-205ENST00000581487 SMC4Q9NTJ3 1288 aa9.13□□□□□ -0.95
CMTM4-205ENST00000581487 ZMYND15Q9H091 742 aa9.13□□□□□ -0.95
CMTM4-205ENST00000581487 FOXD4L1Q9NU39 408 aa9.13□□□□□ -0.95
CMTM4-205ENST00000581487 PES1O00541 588 aaKnown RBP9.13□□□□□ -0.95
CMTM4-205ENST00000581487 AEBP1Q8IUX7 1158 aa9.12□□□□□ -0.95
CMTM4-205ENST00000581487 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
CMTM4-205ENST00000581487 CGNL1Q0VF96 1302 aa9.12□□□□□ -0.95
CMTM4-205ENST00000581487 WWC2Q6AWC2 1192 aa9.12□□□□□ -0.95
CMTM4-205ENST00000581487 HOMER1Q86YM7 354 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms