RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 HNRNPUQ00839 825 aaKnown RBP eCLIP5.75□□□□□ -1.49
RTTN-206ENST00000581161 TDRD9Q8NDG6 1382 aaKnown RBP5.75□□□□□ -1.49
RTTN-206ENST00000581161 INSRP06213 1382 aa5.75□□□□□ -1.49
RTTN-206ENST00000581161 PRM3Q9NNZ6 103 aa5.74□□□□□ -1.49
RTTN-206ENST00000581161 MADDQ8WXG6 1647 aa5.74□□□□□ -1.49
RTTN-206ENST00000581161 NCBP3Q53F19 620 aaKnown RBP5.74□□□□□ -1.49
RTTN-206ENST00000581161 FAM135AQ9P2D6 1515 aa5.74□□□□□ -1.49
RTTN-206ENST00000581161 PLB1Q6P1J6 1458 aa5.73□□□□□ -1.49
RTTN-206ENST00000581161 CANXP27824 592 aaKnown RBP5.73□□□□□ -1.49
RTTN-206ENST00000581161 ERCC6Q03468 1493 aa5.73□□□□□ -1.49
RTTN-206ENST00000581161 TONSLQ96HA7 1378 aa5.73□□□□□ -1.49
RTTN-206ENST00000581161 ZFYVE16Q7Z3T8 1539 aa5.73□□□□□ -1.49
RTTN-206ENST00000581161 KIAA1107Q9UPP5 1409 aa5.73□□□□□ -1.49
RTTN-206ENST00000581161 CAMSAP2Q08AD1 1489 aa5.72□□□□□ -1.49
RTTN-206ENST00000581161 ADGRB1O14514 1584 aa5.72□□□□□ -1.49
RTTN-206ENST00000581161 MYO5CQ9NQX4 1742 aa5.72□□□□□ -1.49
RTTN-206ENST00000581161 KIDINS220Q9ULH0 1771 aa5.72□□□□□ -1.49
RTTN-206ENST00000581161 RALGAPBQ86X10 1494 aa5.71□□□□□ -1.49
RTTN-206ENST00000581161 TRIM44Q96DX7 344 aaPredicted RBP5.71□□□□□ -1.5
RTTN-206ENST00000581161 LRPPRCP42704 1394 aaKnown RBP5.71□□□□□ -1.5
RTTN-206ENST00000581161 REREQ9P2R6 1566 aa5.71□□□□□ -1.5
RTTN-206ENST00000581161 CCER2I3L3R5 266 aa5.7□□□□□ -1.5
RTTN-206ENST00000581161 ZCCHC11Q5TAX3 1644 aaKnown RBP5.7□□□□□ -1.5
RTTN-206ENST00000581161 SYNMO15061 1565 aa5.7□□□□□ -1.5
RTTN-206ENST00000581161 COL17A1Q9UMD9 1497 aaPredicted RBP5.7□□□□□ -1.5
RTTN-206ENST00000581161 USP32Q8NFA0 1604 aa5.7□□□□□ -1.5
RTTN-206ENST00000581161 SYCP2Q9BX26 1530 aa5.69□□□□□ -1.5
RTTN-206ENST00000581161 ABCC3O15438 1527 aa5.69□□□□□ -1.5
RTTN-206ENST00000581161 FAM9BQ8IZU0 186 aa5.69□□□□□ -1.5
RTTN-206ENST00000581161 TULP1O00294 542 aaPredicted RBP5.69□□□□□ -1.5
RTTN-206ENST00000581161 SHPRHQ149N8 1683 aa5.68□□□□□ -1.5
RTTN-206ENST00000581161 CAMSAP1Q5T5Y3 1602 aa5.68□□□□□ -1.5
RTTN-206ENST00000581161 NPM2Q86SE8 214 aaKnown RBP5.68□□□□□ -1.5
RTTN-206ENST00000581161 TRPM2O94759 1503 aa5.67□□□□□ -1.5
RTTN-206ENST00000581161 NBR1Q14596 966 aa5.67□□□□□ -1.5
RTTN-206ENST00000581161 PRAG1Q86YV5 1406 aa5.67□□□□□ -1.5
RTTN-206ENST00000581161 PRG4Q92954 1404 aaPredicted RBP5.66□□□□□ -1.5
RTTN-206ENST00000581161 MROH2AA6NES4 1674 aa5.66□□□□□ -1.5
RTTN-206ENST00000581161 MSH5O43196 834 aa5.66□□□□□ -1.5
RTTN-206ENST00000581161 HSP90AA1P07900 732 aaKnown RBP5.66□□□□□ -1.5
RTTN-206ENST00000581161 TNNT2P45379 298 aaPredicted RBP5.66□□□□□ -1.5
RTTN-206ENST00000581161 CHIC2Q9UKJ5 165 aa5.66□□□□□ -1.5
RTTN-206ENST00000581161 RICTORQ6R327 1708 aa5.66□□□□□ -1.5
RTTN-206ENST00000581161 C11orf95C9JLR9 678 aaPredicted RBP5.66□□□□□ -1.5
RTTN-206ENST00000581161 EFCAB6Q5THR3 1501 aa5.66□□□□□ -1.5
RTTN-206ENST00000581161 TET3O43151 1660 aa5.66□□□□□ -1.5
RTTN-206ENST00000581161 SENP3-EIF4A1A0A087X0R7 540 aa5.66□□□□□ -1.5
RTTN-206ENST00000581161 TMEM131LA2VDJ0 1609 aa5.65□□□□□ -1.5
RTTN-206ENST00000581161 MRS2Q9HD23 443 aa5.65□□□□□ -1.5
RTTN-206ENST00000581161 CLTCQ00610 1675 aaKnown RBP5.65□□□□□ -1.5
RTTN-206ENST00000581161 B4GALNT3Q6L9W6 998 aa5.65□□□□□ -1.5
RTTN-206ENST00000581161 USP54Q70EL1 1684 aa5.65□□□□□ -1.51
RTTN-206ENST00000581161 ARID3CA6NKF2 412 aa5.65□□□□□ -1.51
RTTN-206ENST00000581161 CCDC141Q6ZP82 1450 aa5.65□□□□□ -1.51
RTTN-206ENST00000581161 ASXL1Q8IXJ9 1541 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 NLRP1Q9C000 1473 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 PLPPR3Q6T4P5 718 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 PPP4R2Q9NY27 417 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 PPLO60437 1756 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 MAP3K4Q9Y6R4 1608 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 A2MP01023 1474 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 RTEL1-TNFRSF6BF6WH68 1400 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 HSPA5P11021 654 aaKnown RBP5.64□□□□□ -1.51
RTTN-206ENST00000581161 RRP7BPQ9NSQ0 103 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 ADGRB3O60242 1522 aa5.64□□□□□ -1.51
RTTN-206ENST00000581161 CLTCL1P53675 1640 aa5.63□□□□□ -1.51
RTTN-206ENST00000581161 ZNF326Q5BKZ1 582 aaKnown RBP5.63□□□□□ -1.51
RTTN-206ENST00000581161 HECW2Q9P2P5 1572 aa5.63□□□□□ -1.51
RTTN-206ENST00000581161 CLSTN1O94985 981 aa5.63□□□□□ -1.51
RTTN-206ENST00000581161 KDM5AP29375 1690 aaKnown RBP5.63□□□□□ -1.51
RTTN-206ENST00000581161 GLI2P10070 1586 aa5.63□□□□□ -1.51
RTTN-206ENST00000581161 ESF1Q9H501 851 aaKnown RBP5.63□□□□□ -1.51
RTTN-206ENST00000581161 ERBINQ96RT1 1412 aa5.63□□□□□ -1.51
RTTN-206ENST00000581161 SETBP1Q9Y6X0 1596 aa5.63□□□□□ -1.51
RTTN-206ENST00000581161 DEKP35659 375 aaKnown RBP5.63□□□□□ -1.51
RTTN-206ENST00000581161 PRKCSHP14314 528 aaPredicted RBP5.63□□□□□ -1.51
RTTN-206ENST00000581161 SCAPERQ9BY12 1400 aa5.63□□□□□ -1.51
RTTN-206ENST00000581161 ANKRD26Q9UPS8 1709 aa5.62□□□□□ -1.51
RTTN-206ENST00000581161 MTUS2Q5JR59 1369 aa5.62□□□□□ -1.51
RTTN-206ENST00000581161 NRXN3Q9Y4C0 1643 aa5.62□□□□□ -1.51
RTTN-206ENST00000581161 FANCIQ9NVI1 1328 aa5.62□□□□□ -1.51
RTTN-206ENST00000581161 EIF4G2P78344 907 aaKnown RBP eCLIP5.62□□□□□ -1.51
RTTN-206ENST00000581161 A0A0G2JS52 829 aa5.61□□□□□ -1.51
RTTN-206ENST00000581161 ANP32AP39687 249 aaKnown RBP5.61□□□□□ -1.51
RTTN-206ENST00000581161 PER1O15534 1290 aaPredicted RBP5.61□□□□□ -1.51
RTTN-206ENST00000581161 L1TD1Q5T7N2 865 aaKnown RBP5.61□□□□□ -1.51
RTTN-206ENST00000581161 MYOM2P54296 1465 aa5.61□□□□□ -1.51
RTTN-206ENST00000581161 NBPF8Q3BBV2 869 aa5.61□□□□□ -1.51
RTTN-206ENST00000581161 NOP58Q9Y2X3 529 aaKnown RBP5.61□□□□□ -1.51
RTTN-206ENST00000581161 WASHC2AQ641Q2 1341 aa5.61□□□□□ -1.51
RTTN-206ENST00000581161 MARF1Q9Y4F3 1742 aaKnown RBP5.61□□□□□ -1.51
RTTN-206ENST00000581161 ZRSR1Q15695 479 aaKnown RBP5.61□□□□□ -1.51
RTTN-206ENST00000581161 CALRP27797 417 aaKnown RBP5.6□□□□□ -1.51
RTTN-206ENST00000581161 CCDC136Q96JN2 1154 aa5.6□□□□□ -1.51
RTTN-206ENST00000581161 EIF5BO60841 1220 aaKnown RBP5.59□□□□□ -1.51
RTTN-206ENST00000581161 PLCH2O75038 1416 aa5.59□□□□□ -1.51
RTTN-206ENST00000581161 ADGRB2O60241 1585 aa5.59□□□□□ -1.51
RTTN-206ENST00000581161 CDC42BPGQ6DT37 1551 aa5.59□□□□□ -1.51
RTTN-206ENST00000581161 CARMIL2Q6F5E8 1435 aa5.59□□□□□ -1.51
RTTN-206ENST00000581161 FOXD1Q16676 465 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms