RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.247e-9■■□□□ 13.5
CDK5RAP3-220ENST00000581160 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
CDK5RAP3-220ENST00000581160 NUP155O75694 1391 aa13.56□□□□□ -0.24
CDK5RAP3-220ENST00000581160 ARID4BQ4LE39 1312 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-220ENST00000581160 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
CDK5RAP3-220ENST00000581160 KANK1Q14678 1352 aa13.53□□□□□ -0.24
CDK5RAP3-220ENST00000581160 UNC13BO14795 1591 aa13.53□□□□□ -0.24
CDK5RAP3-220ENST00000581160 DEPDC5O75140 1603 aa13.52□□□□□ -0.25
CDK5RAP3-220ENST00000581160 RNF17Q9BXT8 1623 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-220ENST00000581160 SIGLEC1Q9BZZ2 1709 aa13.52□□□□□ -0.25
CDK5RAP3-220ENST00000581160 KDM5DQ9BY66 1539 aa13.51□□□□□ -0.25
CDK5RAP3-220ENST00000581160 MLECQ14165 292 aa13.51□□□□□ -0.25
CDK5RAP3-220ENST00000581160 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-220ENST00000581160 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
CDK5RAP3-220ENST00000581160 WASHC2CQ9Y4E1 1318 aa13.5□□□□□ -0.25
CDK5RAP3-220ENST00000581160 VWDEQ8N2E2 1590 aa13.49□□□□□ -0.25
CDK5RAP3-220ENST00000581160 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-220ENST00000581160 PZPP20742 1482 aa13.49□□□□□ -0.25
CDK5RAP3-220ENST00000581160 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-220ENST00000581160 FAM135AQ9P2D6 1515 aa13.48□□□□□ -0.25
CDK5RAP3-220ENST00000581160 IQGAP3Q86VI3 1631 aa13.47□□□□□ -0.25
CDK5RAP3-220ENST00000581160 PKD2Q13563 968 aa13.47□□□□□ -0.25
CDK5RAP3-220ENST00000581160 ESF1Q9H501 851 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-220ENST00000581160 LMTK2Q8IWU2 1503 aa13.47□□□□□ -0.25
CDK5RAP3-220ENST00000581160 CCER1Q8TC90 406 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ABCC3O15438 1527 aa13.44□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ARHGAP31Q2M1Z3 1444 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 CNTLNQ9NXG0 1405 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 FOXD1Q16676 465 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 TET3O43151 1660 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ZMYM3Q14202 1370 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
CDK5RAP3-220ENST00000581160 CEP152O94986 1710 aa13.41□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ANKRD30BQ9BXX2 1392 aa13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 RPRD2Q5VT52 1461 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 CLTCQ00610 1675 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 NPATQ14207 1427 aa13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 E9PCH4 1651 aa13.38□□□□□ -0.27
CDK5RAP3-220ENST00000581160 ADAMTSL3P82987 1691 aa13.38□□□□□ -0.27
CDK5RAP3-220ENST00000581160 PTPRTO14522 1441 aa13.38□□□□□ -0.27
CDK5RAP3-220ENST00000581160 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-220ENST00000581160 MROH2AA6NES4 1674 aa13.36□□□□□ -0.27
CDK5RAP3-220ENST00000581160 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
CDK5RAP3-220ENST00000581160 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
CDK5RAP3-220ENST00000581160 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
CDK5RAP3-220ENST00000581160 NOS1P29475 1434 aa13.34□□□□□ -0.27
CDK5RAP3-220ENST00000581160 CEBPAP49715 358 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-220ENST00000581160 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
CDK5RAP3-220ENST00000581160 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-220ENST00000581160 KDM4FA0A1W2PPD8 638 aa13.33□□□□□ -0.28
CDK5RAP3-220ENST00000581160 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
CDK5RAP3-220ENST00000581160 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
CDK5RAP3-220ENST00000581160 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-220ENST00000581160 ERVK-7P63135 1459 aa13.31□□□□□ -0.28
CDK5RAP3-220ENST00000581160 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 TRPM2O94759 1503 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 IDI1Q13907 227 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 C3P01024 1663 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
CDK5RAP3-220ENST00000581160 PTPRMP28827 1452 aa13.29□□□□□ -0.28
CDK5RAP3-220ENST00000581160 PLPPR3Q6T4P5 718 aa13.28□□□□□ -0.28
CDK5RAP3-220ENST00000581160 TNRQ92752 1358 aa13.28□□□□□ -0.28
CDK5RAP3-220ENST00000581160 SYNMO15061 1565 aa13.27□□□□□ -0.29
CDK5RAP3-220ENST00000581160 CLTCL1P53675 1640 aa13.25□□□□□ -0.29
CDK5RAP3-220ENST00000581160 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-220ENST00000581160 SETD1BQ9UPS6 1966 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-220ENST00000581160 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
CDK5RAP3-220ENST00000581160 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-220ENST00000581160 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
CDK5RAP3-220ENST00000581160 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
CDK5RAP3-220ENST00000581160 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 L3MBTL2Q969R5 705 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 NEURL4Q96JN8 1562 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
CDK5RAP3-220ENST00000581160 RPGRIP1LQ68CZ1 1315 aa13.21□□□□□ -0.29
CDK5RAP3-220ENST00000581160 KIF1BO60333 1816 aa13.21□□□□□ -0.29
CDK5RAP3-220ENST00000581160 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
CDK5RAP3-220ENST00000581160 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-220ENST00000581160 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-220ENST00000581160 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-220ENST00000581160 DCAF11Q8TEB1 546 aa13.19□□□□□ -0.3
CDK5RAP3-220ENST00000581160 TMEM131LA2VDJ0 1609 aa13.19□□□□□ -0.3
CDK5RAP3-220ENST00000581160 A2ML1A8K2U0 1454 aa13.18□□□□□ -0.3
CDK5RAP3-220ENST00000581160 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
CDK5RAP3-220ENST00000581160 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-220ENST00000581160 KDM5AP29375 1690 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-220ENST00000581160 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
CDK5RAP3-220ENST00000581160 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
CDK5RAP3-220ENST00000581160 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
CDK5RAP3-220ENST00000581160 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-220ENST00000581160 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDK5RAP3-220ENST00000581160 UBR1Q8IWV7 1749 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms