RNA–Protein interactions for RNA: ENST00000580500.5

LINC00511-209, long intergenic non-protein coding RNA 511, humanhuman

TSL 4

Gene LINC00511, Length 561 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-209ENST00000580500 CCDC18Q5T9S5 1454 aa17.08■□□□□ 0.32
LINC00511-209ENST00000580500 NEO1Q92859 1461 aa17.08■□□□□ 0.32
LINC00511-209ENST00000580500 TROQ12816 1431 aaPredicted RBP17.08■□□□□ 0.32
LINC00511-209ENST00000580500 KLHL34Q8N239 644 aa17.08■□□□□ 0.32
LINC00511-209ENST00000580500 SCUBE2Q9NQ36 999 aa17.07■□□□□ 0.32
LINC00511-209ENST00000580500 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
LINC00511-209ENST00000580500 SEC24BO95487 1268 aa17.06■□□□□ 0.32
LINC00511-209ENST00000580500 PYGBP11216 843 aa17.06■□□□□ 0.32
LINC00511-209ENST00000580500 TMEM106CQ9BVX2 250 aa17.05■□□□□ 0.32
LINC00511-209ENST00000580500 COLQQ9Y215 455 aaPredicted RBP17.05■□□□□ 0.32
LINC00511-209ENST00000580500 FANCAO15360 1455 aa17.05■□□□□ 0.32
LINC00511-209ENST00000580500 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
LINC00511-209ENST00000580500 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
LINC00511-209ENST00000580500 PLCH2O75038 1416 aa17.04■□□□□ 0.32
LINC00511-209ENST00000580500 AKNAQ7Z591 1439 aa17.03■□□□□ 0.32
LINC00511-209ENST00000580500 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.32
LINC00511-209ENST00000580500 GSE1Q14687 1217 aa17.02■□□□□ 0.32
LINC00511-209ENST00000580500 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.31
LINC00511-209ENST00000580500 KDM4FA0A1W2PPD8 638 aa17■□□□□ 0.31
LINC00511-209ENST00000580500 RICTORQ6R327 1708 aa16.99■□□□□ 0.31
LINC00511-209ENST00000580500 CDC42BPBQ9Y5S2 1711 aa16.98■□□□□ 0.31
LINC00511-209ENST00000580500 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
LINC00511-209ENST00000580500 ADGRL1O94910 1474 aa16.95■□□□□ 0.3
LINC00511-209ENST00000580500 EFCAB2Q5VUJ9 269 aa16.95■□□□□ 0.3
LINC00511-209ENST00000580500 CDC42BPAQ5VT25 1732 aa16.95■□□□□ 0.3
LINC00511-209ENST00000580500 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
LINC00511-209ENST00000580500 PREX2Q70Z35 1606 aa16.94■□□□□ 0.3
LINC00511-209ENST00000580500 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
LINC00511-209ENST00000580500 PCDHB8Q9UN66 801 aa16.93■□□□□ 0.3
LINC00511-209ENST00000580500 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
LINC00511-209ENST00000580500 MTUS2Q5JR59 1369 aa16.9■□□□□ 0.3
LINC00511-209ENST00000580500 POGZQ7Z3K3 1410 aa16.9■□□□□ 0.3
LINC00511-209ENST00000580500 CHRM1P11229 460 aaPredicted RBP16.9■□□□□ 0.3
LINC00511-209ENST00000580500 POTEMA6NI47 508 aa16.89■□□□□ 0.29
LINC00511-209ENST00000580500 ZMYM4Q5VZL5 1548 aa16.89■□□□□ 0.29
LINC00511-209ENST00000580500 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
LINC00511-209ENST00000580500 GPATCH8Q9UKJ3 1502 aaKnown RBP16.88■□□□□ 0.29
LINC00511-209ENST00000580500 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
LINC00511-209ENST00000580500 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
LINC00511-209ENST00000580500 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
LINC00511-209ENST00000580500 PLCG2P16885 1265 aa16.87■□□□□ 0.29
LINC00511-209ENST00000580500 IRX5P78411 483 aaPredicted RBP16.87■□□□□ 0.29
LINC00511-209ENST00000580500 IFNLR1Q8IU57 520 aaPredicted RBP16.87■□□□□ 0.29
LINC00511-209ENST00000580500 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
LINC00511-209ENST00000580500 ARHGEF12Q9NZN5 1544 aa16.86■□□□□ 0.29
LINC00511-209ENST00000580500 ABCC1P33527 1531 aa16.86■□□□□ 0.29
LINC00511-209ENST00000580500 POTEGQ6S5H5 508 aa16.85■□□□□ 0.29
LINC00511-209ENST00000580500 AFAP1Q8N556 730 aa16.85■□□□□ 0.29
LINC00511-209ENST00000580500 ZFYVE16Q7Z3T8 1539 aa16.85■□□□□ 0.29
LINC00511-209ENST00000580500 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
LINC00511-209ENST00000580500 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
LINC00511-209ENST00000580500 SAMD9LQ8IVG5 1584 aa16.84■□□□□ 0.29
LINC00511-209ENST00000580500 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
LINC00511-209ENST00000580500 ZNF518AQ6AHZ1 1483 aa16.83■□□□□ 0.28
LINC00511-209ENST00000580500 MAGI2Q86UL8 1455 aa16.83■□□□□ 0.28
LINC00511-209ENST00000580500 SPOCK2Q92563 424 aa16.83■□□□□ 0.28
LINC00511-209ENST00000580500 ZNF777Q9ULD5 760 aaPredicted RBP16.83■□□□□ 0.28
LINC00511-209ENST00000580500 KDM5CP41229 1560 aa16.82■□□□□ 0.28
LINC00511-209ENST00000580500 TRAPPC8Q9Y2L5 1435 aa16.82■□□□□ 0.28
LINC00511-209ENST00000580500 OCEL1Q9H607 264 aa16.81■□□□□ 0.28
LINC00511-209ENST00000580500 SUPT6HQ7KZ85 1726 aaKnown RBP16.81■□□□□ 0.28
LINC00511-209ENST00000580500 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
LINC00511-209ENST00000580500 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
LINC00511-209ENST00000580500 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
LINC00511-209ENST00000580500 BCORL1Q5H9F3 1711 aa16.79■□□□□ 0.28
LINC00511-209ENST00000580500 ADAMTSL3P82987 1691 aa16.79■□□□□ 0.28
LINC00511-209ENST00000580500 ARID4BQ4LE39 1312 aaPredicted RBP16.79■□□□□ 0.28
LINC00511-209ENST00000580500 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
LINC00511-209ENST00000580500 SYCP2Q9BX26 1530 aa16.79■□□□□ 0.28
LINC00511-209ENST00000580500 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.281e-6■■□□□ 12.6
LINC00511-209ENST00000580500 LCE2DQ5TA82 110 aaPredicted RBP16.78■□□□□ 0.28
LINC00511-209ENST00000580500 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
LINC00511-209ENST00000580500 HECW2Q9P2P5 1572 aa16.77■□□□□ 0.28
LINC00511-209ENST00000580500 ZNF644Q9H582 1327 aaPredicted RBP16.77■□□□□ 0.28
LINC00511-209ENST00000580500 FAM163AQ96GL9 167 aaPredicted RBP16.77■□□□□ 0.28
LINC00511-209ENST00000580500 ATP10AO60312 1499 aa16.76■□□□□ 0.27
LINC00511-209ENST00000580500 MLH3Q9UHC1 1453 aa16.75■□□□□ 0.27
LINC00511-209ENST00000580500 ABCA6Q8N139 1617 aa16.75■□□□□ 0.27
LINC00511-209ENST00000580500 DIP2CQ9Y2E4 1556 aa16.75■□□□□ 0.27
LINC00511-209ENST00000580500 KIDINS220Q9ULH0 1771 aa16.74■□□□□ 0.27
LINC00511-209ENST00000580500 KIAA1107Q9UPP5 1409 aa16.74■□□□□ 0.27
LINC00511-209ENST00000580500 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
LINC00511-209ENST00000580500 MADDQ8WXG6 1647 aa16.74■□□□□ 0.27
LINC00511-209ENST00000580500 C9orf84Q5VXU9 1444 aa16.73■□□□□ 0.27
LINC00511-209ENST00000580500 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
LINC00511-209ENST00000580500 PCDH10Q9P2E7 1040 aa16.71■□□□□ 0.27
LINC00511-209ENST00000580500 MBD5Q9P267 1494 aa16.7■□□□□ 0.26
LINC00511-209ENST00000580500 SLAIN1Q8ND83 568 aa16.7■□□□□ 0.26
LINC00511-209ENST00000580500 PLSCR2Q9NRY7 297 aa16.7■□□□□ 0.26
LINC00511-209ENST00000580500 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
LINC00511-209ENST00000580500 RIMS1Q86UR5 1692 aaKnown RBP16.69■□□□□ 0.26
LINC00511-209ENST00000580500 PTPRMP28827 1452 aa16.69■□□□□ 0.26
LINC00511-209ENST00000580500 PSEN1P49768 467 aa16.69■□□□□ 0.26
LINC00511-209ENST00000580500 MLECQ14165 292 aa16.69■□□□□ 0.26
LINC00511-209ENST00000580500 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
LINC00511-209ENST00000580500 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
LINC00511-209ENST00000580500 REREQ9P2R6 1566 aa16.68■□□□□ 0.26
LINC00511-209ENST00000580500 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
LINC00511-209ENST00000580500 INO80Q9ULG1 1556 aaPredicted RBP16.67■□□□□ 0.26
LINC00511-209ENST00000580500 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms