RNA–Protein interactions for RNA: ENST00000579180.2

MSI2-206, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MSI2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-206ENST00000579180 SIN3AQ96ST3 1273 aa22.99■■□□□ 1.27
MSI2-206ENST00000579180 FAM135AQ9P2D6 1515 aa22.99■■□□□ 1.27
MSI2-206ENST00000579180 DIP2CQ9Y2E4 1556 aa22.98■■□□□ 1.27
MSI2-206ENST00000579180 A2MP01023 1474 aa22.98■■□□□ 1.27
MSI2-206ENST00000579180 BCORL1Q5H9F3 1711 aa22.95■■□□□ 1.26
MSI2-206ENST00000579180 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
MSI2-206ENST00000579180 FOXD1Q16676 465 aa22.94■■□□□ 1.26
MSI2-206ENST00000579180 ANKRD30BQ9BXX2 1392 aa22.94■■□□□ 1.26
MSI2-206ENST00000579180 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
MSI2-206ENST00000579180 PKD2Q13563 968 aa22.92■■□□□ 1.26
MSI2-206ENST00000579180 YEATS2Q9ULM3 1422 aa22.91■■□□□ 1.26
MSI2-206ENST00000579180 RNF17Q9BXT8 1623 aaKnown RBP22.91■■□□□ 1.26
MSI2-206ENST00000579180 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
MSI2-206ENST00000579180 VWDEQ8N2E2 1590 aa22.9■■□□□ 1.26
MSI2-206ENST00000579180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.262e-7■■□□□ 13.4
MSI2-206ENST00000579180 PRDM15P57071 1507 aaPredicted RBP22.9■■□□□ 1.26
MSI2-206ENST00000579180 KIF3BO15066 747 aa22.89■■□□□ 1.25
MSI2-206ENST00000579180 TIMELESSQ9UNS1 1208 aa22.89■■□□□ 1.25
MSI2-206ENST00000579180 TRHP20396 242 aaPredicted RBP22.86■■□□□ 1.25
MSI2-206ENST00000579180 REREQ9P2R6 1566 aa22.84■■□□□ 1.25
MSI2-206ENST00000579180 TET3O43151 1660 aa22.84■■□□□ 1.25
MSI2-206ENST00000579180 RPRD2Q5VT52 1461 aaKnown RBP22.84■■□□□ 1.25
MSI2-206ENST00000579180 ATP10AO60312 1499 aa22.83■■□□□ 1.25
MSI2-206ENST00000579180 E9PCH4 1651 aa22.82■■□□□ 1.24
MSI2-206ENST00000579180 KANK1Q14678 1352 aa22.82■■□□□ 1.24
MSI2-206ENST00000579180 ARHGEF40Q8TER5 1519 aa22.8■■□□□ 1.24
MSI2-206ENST00000579180 TONSLQ96HA7 1378 aa22.79■■□□□ 1.24
MSI2-206ENST00000579180 CEP152O94986 1710 aa22.79■■□□□ 1.24
MSI2-206ENST00000579180 LMTK2Q8IWU2 1503 aa22.78■■□□□ 1.24
MSI2-206ENST00000579180 PLA2R1Q13018 1463 aa22.76■■□□□ 1.23
MSI2-206ENST00000579180 SIGLEC1Q9BZZ2 1709 aa22.76■■□□□ 1.23
MSI2-206ENST00000579180 AGLP35573 1532 aa22.76■■□□□ 1.23
MSI2-206ENST00000579180 EFCAB6Q5THR3 1501 aa22.74■■□□□ 1.23
MSI2-206ENST00000579180 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
MSI2-206ENST00000579180 SPHKAPQ2M3C7 1700 aa22.73■■□□□ 1.23
MSI2-206ENST00000579180 GGT6Q6P531 493 aa22.72■■□□□ 1.23
MSI2-206ENST00000579180 ABCC3O15438 1527 aa22.72■■□□□ 1.23
MSI2-206ENST00000579180 ZC3H13Q5T200 1668 aaKnown RBP22.71■■□□□ 1.23
MSI2-206ENST00000579180 PTPRTO14522 1441 aa22.69■■□□□ 1.22
MSI2-206ENST00000579180 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
MSI2-206ENST00000579180 TRPM2O94759 1503 aa22.68■■□□□ 1.22
MSI2-206ENST00000579180 CCDC144AA2RUR9 1427 aa22.67■■□□□ 1.22
MSI2-206ENST00000579180 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
MSI2-206ENST00000579180 WASHC2CQ9Y4E1 1318 aa22.64■■□□□ 1.22
MSI2-206ENST00000579180 NPATQ14207 1427 aa22.62■■□□□ 1.21
MSI2-206ENST00000579180 CLTCL1P53675 1640 aa22.61■■□□□ 1.21
MSI2-206ENST00000579180 CFAP65Q6ZU64 1925 aaKnown RBP22.61■■□□□ 1.21
MSI2-206ENST00000579180 ARHGAP31Q2M1Z3 1444 aa22.59■■□□□ 1.21
MSI2-206ENST00000579180 PPP6R1Q9UPN7 881 aa22.59■■□□□ 1.21
MSI2-206ENST00000579180 CLTCQ00610 1675 aaKnown RBP22.56■■□□□ 1.2
MSI2-206ENST00000579180 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
MSI2-206ENST00000579180 NEURL4Q96JN8 1562 aa22.53■■□□□ 1.2
MSI2-206ENST00000579180 UGGT1Q9NYU2 1555 aa22.53■■□□□ 1.2
MSI2-206ENST00000579180 KIF1BO60333 1816 aa22.53■■□□□ 1.2
MSI2-206ENST00000579180 NOS1P29475 1434 aa22.53■■□□□ 1.2
MSI2-206ENST00000579180 CNTLNQ9NXG0 1405 aa22.53■■□□□ 1.2
MSI2-206ENST00000579180 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
MSI2-206ENST00000579180 PREX1Q8TCU6 1659 aa22.52■■□□□ 1.2
MSI2-206ENST00000579180 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
MSI2-206ENST00000579180 UHRF1BP1Q6BDS2 1440 aa22.5■■□□□ 1.19
MSI2-206ENST00000579180 SYNMO15061 1565 aa22.5■■□□□ 1.19
MSI2-206ENST00000579180 PIK3C2BO00750 1634 aa22.49■■□□□ 1.19
MSI2-206ENST00000579180 MLECQ14165 292 aa22.49■■□□□ 1.19
MSI2-206ENST00000579180 RGL3Q3MIN7 710 aa22.46■■□□□ 1.19
MSI2-206ENST00000579180 ARID4BQ4LE39 1312 aaPredicted RBP22.46■■□□□ 1.19
MSI2-206ENST00000579180 MROH2AA6NES4 1674 aa22.46■■□□□ 1.19
MSI2-206ENST00000579180 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
MSI2-206ENST00000579180 ADGRB3O60242 1522 aa22.43■■□□□ 1.18
MSI2-206ENST00000579180 ERVK-7P63135 1459 aa22.42■■□□□ 1.18
MSI2-206ENST00000579180 KDM2AQ9Y2K7 1162 aa22.42■■□□□ 1.18
MSI2-206ENST00000579180 IFT172Q9UG01 1749 aa22.41■■□□□ 1.18
MSI2-206ENST00000579180 SPATA31D1Q6ZQQ2 1576 aa22.4■■□□□ 1.18
MSI2-206ENST00000579180 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
MSI2-206ENST00000579180 TRPM1Q7Z4N2 1603 aa22.38■■□□□ 1.17
MSI2-206ENST00000579180 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
MSI2-206ENST00000579180 ZMYM3Q14202 1370 aa22.38■■□□□ 1.17
MSI2-206ENST00000579180 FBXO31Q5XUX0 539 aaPredicted RBP22.38■■□□□ 1.17
MSI2-206ENST00000579180 ZNF326Q5BKZ1 582 aaKnown RBP22.37■■□□□ 1.17
MSI2-206ENST00000579180 ESF1Q9H501 851 aaKnown RBP22.37■■□□□ 1.17
MSI2-206ENST00000579180 FER1L4A9Z1Z3 1794 aa22.37■■□□□ 1.17
MSI2-206ENST00000579180 SLC52A1Q9NWF4 448 aa22.36■■□□□ 1.17
MSI2-206ENST00000579180 MADDQ8WXG6 1647 aa22.36■■□□□ 1.17
MSI2-206ENST00000579180 STAC3Q96MF2 364 aa22.35■■□□□ 1.17
MSI2-206ENST00000579180 PPLO60437 1756 aa22.35■■□□□ 1.17
MSI2-206ENST00000579180 MYO5BQ9ULV0 1848 aa22.34■■□□□ 1.17
MSI2-206ENST00000579180 IDI1Q13907 227 aa22.34■■□□□ 1.17
MSI2-206ENST00000579180 TMEM131LA2VDJ0 1609 aa22.33■■□□□ 1.16
MSI2-206ENST00000579180 MYOM2P54296 1465 aa22.32■■□□□ 1.16
MSI2-206ENST00000579180 C3P01024 1663 aa22.3■■□□□ 1.16
MSI2-206ENST00000579180 CHGAP10645 457 aaKnown RBP22.29■■□□□ 1.16
MSI2-206ENST00000579180 EIF4G2P78344 907 aaKnown RBP eCLIP22.28■■□□□ 1.161e-6■■■■■ 30.9
MSI2-206ENST00000579180 LAMC1P11047 1609 aa22.28■■□□□ 1.16
MSI2-206ENST00000579180 HSPA5P11021 654 aaKnown RBP22.28■■□□□ 1.16
MSI2-206ENST00000579180 HIRIP3Q9BW71 556 aaPredicted RBP22.28■■□□□ 1.16
MSI2-206ENST00000579180 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
MSI2-206ENST00000579180 NRXN1Q9ULB1 1477 aa22.27■■□□□ 1.16
MSI2-206ENST00000579180 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
MSI2-206ENST00000579180 NEXMIFQ5QGS0 1516 aa22.26■■□□□ 1.15
MSI2-206ENST00000579180 GPRASP1Q5JY77 1395 aa22.26■■□□□ 1.15
MSI2-206ENST00000579180 ADAMTSL3P82987 1691 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms