RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 NPHP4O75161 1426 aaPredicted RBP18.82■□□□□ 0.6
GGA3-206ENST00000578773 CDK11AQ9UQ88 783 aaPredicted RBP18.81■□□□□ 0.6
GGA3-206ENST00000578773 FMN1Q68DA7 1419 aa18.8■□□□□ 0.6
GGA3-206ENST00000578773 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
GGA3-206ENST00000578773 MED14O60244 1454 aa18.79■□□□□ 0.6
GGA3-206ENST00000578773 HNRNPMP52272 730 aaKnown RBP eCLIP18.78■□□□□ 0.6
GGA3-206ENST00000578773 ZNF777Q9ULD5 760 aaPredicted RBP18.78■□□□□ 0.6
GGA3-206ENST00000578773 TNRQ92752 1358 aa18.78■□□□□ 0.6
GGA3-206ENST00000578773 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
GGA3-206ENST00000578773 SRCAPQ6ZRS2 3230 aa18.76■□□□□ 0.59
GGA3-206ENST00000578773 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
GGA3-206ENST00000578773 ANKLE2Q86XL3 938 aa18.73■□□□□ 0.59
GGA3-206ENST00000578773 ROBO1Q9Y6N7 1651 aa18.73■□□□□ 0.59
GGA3-206ENST00000578773 PZPP20742 1482 aa18.72■□□□□ 0.59
GGA3-206ENST00000578773 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
GGA3-206ENST00000578773 CFAP65Q6ZU64 1925 aaKnown RBP18.68■□□□□ 0.58
GGA3-206ENST00000578773 UPF1Q92900 1129 aaKnown RBP eCLIP18.68■□□□□ 0.58
GGA3-206ENST00000578773 KDM5DQ9BY66 1539 aa18.68■□□□□ 0.58
GGA3-206ENST00000578773 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
GGA3-206ENST00000578773 EEA1Q15075 1411 aa18.66■□□□□ 0.58
GGA3-206ENST00000578773 UBR1Q8IWV7 1749 aa18.65■□□□□ 0.58
GGA3-206ENST00000578773 MIA2Q96PC5 1412 aa18.64■□□□□ 0.57
GGA3-206ENST00000578773 NLRP1Q9C000 1473 aa18.64■□□□□ 0.57
GGA3-206ENST00000578773 PHLPP1O60346 1717 aa18.63■□□□□ 0.57
GGA3-206ENST00000578773 THEMISQ8N1K5 641 aaPredicted RBP18.62■□□□□ 0.57
GGA3-206ENST00000578773 CCDC18Q5T9S5 1454 aa18.62■□□□□ 0.57
GGA3-206ENST00000578773 FAM135BQ49AJ0 1406 aa18.61■□□□□ 0.57
GGA3-206ENST00000578773 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
GGA3-206ENST00000578773 LRP6O75581 1613 aa18.59■□□□□ 0.57
GGA3-206ENST00000578773 MAP3K1Q13233 1512 aa18.58■□□□□ 0.56
GGA3-206ENST00000578773 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
GGA3-206ENST00000578773 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
GGA3-206ENST00000578773 TRIM52Q96A61 297 aa18.57■□□□□ 0.56
GGA3-206ENST00000578773 PLEKHH2Q8IVE3 1493 aa18.56■□□□□ 0.56
GGA3-206ENST00000578773 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
GGA3-206ENST00000578773 MBD5Q9P267 1494 aa18.55■□□□□ 0.56
GGA3-206ENST00000578773 KIF3BO15066 747 aa18.55■□□□□ 0.56
GGA3-206ENST00000578773 CEP152O94986 1710 aa18.54■□□□□ 0.56
GGA3-206ENST00000578773 UBTFP17480 764 aaKnown RBP18.54■□□□□ 0.56
GGA3-206ENST00000578773 RBM33Q96EV2 1170 aaKnown RBP18.54■□□□□ 0.56
GGA3-206ENST00000578773 NCOA2Q15596 1464 aa18.53■□□□□ 0.56
GGA3-206ENST00000578773 SCAF11Q99590 1463 aaKnown RBP18.53■□□□□ 0.56
GGA3-206ENST00000578773 COL16A1Q07092 1604 aaPredicted RBP18.53■□□□□ 0.56
GGA3-206ENST00000578773 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
GGA3-206ENST00000578773 LTKP29376 864 aa18.51■□□□□ 0.55
GGA3-206ENST00000578773 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
GGA3-206ENST00000578773 WASHC2CQ9Y4E1 1318 aa18.5■□□□□ 0.55
GGA3-206ENST00000578773 ERVK-7P63135 1459 aa18.5■□□□□ 0.55
GGA3-206ENST00000578773 TMEM94Q12767 1356 aa18.49■□□□□ 0.55
GGA3-206ENST00000578773 ABCC3O15438 1527 aa18.49■□□□□ 0.55
GGA3-206ENST00000578773 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
GGA3-206ENST00000578773 ARHGAP23Q9P227 1491 aa18.47■□□□□ 0.55
GGA3-206ENST00000578773 CCNB3Q8WWL7 1395 aa18.47■□□□□ 0.55
GGA3-206ENST00000578773 RTEL1-TNFRSF6BF6WH68 1400 aa18.47■□□□□ 0.55
GGA3-206ENST00000578773 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.55
GGA3-206ENST00000578773 SLIT1O75093 1534 aa18.46■□□□□ 0.55
GGA3-206ENST00000578773 MROH1Q8NDA8 1641 aa18.45■□□□□ 0.54
GGA3-206ENST00000578773 JCADQ9P266 1359 aa18.44■□□□□ 0.54
GGA3-206ENST00000578773 PIK3C2BO00750 1634 aa18.44■□□□□ 0.54
GGA3-206ENST00000578773 SHPRHQ149N8 1683 aa18.43■□□□□ 0.54
GGA3-206ENST00000578773 LRRC9Q6ZRR7 1453 aa18.42■□□□□ 0.54
GGA3-206ENST00000578773 SETBP1Q9Y6X0 1596 aa18.4■□□□□ 0.54
GGA3-206ENST00000578773 TXNDC2Q86VQ3 553 aa18.4■□□□□ 0.54
GGA3-206ENST00000578773 NWD1Q149M9 1564 aa18.39■□□□□ 0.53
GGA3-206ENST00000578773 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
GGA3-206ENST00000578773 PRDM15P57071 1507 aaPredicted RBP18.38■□□□□ 0.53
GGA3-206ENST00000578773 KDM5AP29375 1690 aaKnown RBP18.38■□□□□ 0.53
GGA3-206ENST00000578773 TET3O43151 1660 aa18.37■□□□□ 0.53
GGA3-206ENST00000578773 RGS12O14924 1447 aa18.36■□□□□ 0.53
GGA3-206ENST00000578773 CAMSAP2Q08AD1 1489 aa18.35■□□□□ 0.53
GGA3-206ENST00000578773 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
GGA3-206ENST00000578773 CDK12Q9NYV4 1490 aaPredicted RBP18.34■□□□□ 0.53
GGA3-206ENST00000578773 ZNF772Q68DY9 489 aaPredicted RBP18.34■□□□□ 0.53
GGA3-206ENST00000578773 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
GGA3-206ENST00000578773 RXRBP28702 533 aa18.33■□□□□ 0.52
GGA3-206ENST00000578773 DIP2AQ14689 1571 aa18.33■□□□□ 0.52
GGA3-206ENST00000578773 CHD2O14647 1828 aaKnown RBP18.32■□□□□ 0.52
GGA3-206ENST00000578773 SLC26A8Q96RN1 970 aa18.31■□□□□ 0.52
GGA3-206ENST00000578773 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
GGA3-206ENST00000578773 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
GGA3-206ENST00000578773 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
GGA3-206ENST00000578773 KCNA6P17658 529 aa18.3■□□□□ 0.52
GGA3-206ENST00000578773 NKTRP30414 1462 aaKnown RBP18.3■□□□□ 0.52
GGA3-206ENST00000578773 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
GGA3-206ENST00000578773 MYO5BQ9ULV0 1848 aa18.29■□□□□ 0.52
GGA3-206ENST00000578773 EP400Q96L91 3159 aa18.29■□□□□ 0.52
GGA3-206ENST00000578773 SPATA31A6Q5VVP1 1343 aa18.28■□□□□ 0.52
GGA3-206ENST00000578773 FGD6Q6ZV73 1430 aa18.28■□□□□ 0.52
GGA3-206ENST00000578773 MAST1Q9Y2H9 1570 aa18.28■□□□□ 0.52
GGA3-206ENST00000578773 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.28■□□□□ 0.52
GGA3-206ENST00000578773 MSH6P52701 1360 aa18.28■□□□□ 0.52
GGA3-206ENST00000578773 TMEM2Q9UHN6 1383 aa18.28■□□□□ 0.52
GGA3-206ENST00000578773 EHBP1L1Q8N3D4 1523 aa18.28■□□□□ 0.52
GGA3-206ENST00000578773 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.52
GGA3-206ENST00000578773 AFF2P51816 1311 aa18.25■□□□□ 0.51
GGA3-206ENST00000578773 NUTM2BA6NNL0 878 aaPredicted RBP18.25■□□□□ 0.51
GGA3-206ENST00000578773 NUTM2EB1AL46 878 aaPredicted RBP18.25■□□□□ 0.51
GGA3-206ENST00000578773 NUTM2AQ8IVF1 878 aaPredicted RBP18.25■□□□□ 0.51
GGA3-206ENST00000578773 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
GGA3-206ENST00000578773 EID1Q9Y6B2 187 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms