RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 SIGLEC1Q9BZZ2 1709 aa19.37■□□□□ 0.69
CTC1-203ENST00000578240 PRDM15P57071 1507 aaPredicted RBP19.37■□□□□ 0.69
CTC1-203ENST00000578240 VWDEQ8N2E2 1590 aa19.36■□□□□ 0.69
CTC1-203ENST00000578240 CEP152O94986 1710 aa19.34■□□□□ 0.69
CTC1-203ENST00000578240 RAPGEF3O95398 923 aa19.33■□□□□ 0.69
CTC1-203ENST00000578240 YEATS2Q9ULM3 1422 aa19.32■□□□□ 0.68
CTC1-203ENST00000578240 TRIM52Q96A61 297 aa19.32■□□□□ 0.68
CTC1-203ENST00000578240 A2MP01023 1474 aa19.32■□□□□ 0.68
CTC1-203ENST00000578240 E9PCH4 1651 aa19.32■□□□□ 0.68
CTC1-203ENST00000578240 ARHGEF40Q8TER5 1519 aa19.31■□□□□ 0.68
CTC1-203ENST00000578240 TET3O43151 1660 aa19.31■□□□□ 0.68
CTC1-203ENST00000578240 MPHOSPH9Q99550 1183 aa19.3■□□□□ 0.68
CTC1-203ENST00000578240 ACIN1Q9UKV3 1341 aaKnown RBP19.29■□□□□ 0.68
CTC1-203ENST00000578240 DHX29Q7Z478 1369 aaKnown RBP19.29■□□□□ 0.68
CTC1-203ENST00000578240 REREQ9P2R6 1566 aa19.29■□□□□ 0.68
CTC1-203ENST00000578240 NUP155O75694 1391 aa19.28■□□□□ 0.68
CTC1-203ENST00000578240 SPHKAPQ2M3C7 1700 aa19.25■□□□□ 0.67
CTC1-203ENST00000578240 ANKRD30BQ9BXX2 1392 aa19.25■□□□□ 0.67
CTC1-203ENST00000578240 KDM4FA0A1W2PPD8 638 aa19.24■□□□□ 0.67
CTC1-203ENST00000578240 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
CTC1-203ENST00000578240 FOXD1Q16676 465 aa19.24■□□□□ 0.67
CTC1-203ENST00000578240 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
CTC1-203ENST00000578240 ZC3H13Q5T200 1668 aaKnown RBP19.21■□□□□ 0.67
CTC1-203ENST00000578240 EFCAB6Q5THR3 1501 aa19.21■□□□□ 0.67
CTC1-203ENST00000578240 CAMSAP1Q5T5Y3 1602 aa19.2■□□□□ 0.66
CTC1-203ENST00000578240 RPRD2Q5VT52 1461 aaKnown RBP19.2■□□□□ 0.66
CTC1-203ENST00000578240 LMTK2Q8IWU2 1503 aa19.19■□□□□ 0.66
CTC1-203ENST00000578240 MYT1LQ9UL68 1186 aa19.18■□□□□ 0.66
CTC1-203ENST00000578240 PKD2Q13563 968 aa19.17■□□□□ 0.66
CTC1-203ENST00000578240 ATP10AO60312 1499 aa19.17■□□□□ 0.66
CTC1-203ENST00000578240 CFAP65Q6ZU64 1925 aaKnown RBP19.17■□□□□ 0.66
CTC1-203ENST00000578240 AGLP35573 1532 aa19.17■□□□□ 0.66
CTC1-203ENST00000578240 PLA2R1Q13018 1463 aa19.17■□□□□ 0.66
CTC1-203ENST00000578240 ABCC3O15438 1527 aa19.16■□□□□ 0.66
CTC1-203ENST00000578240 KIF3BO15066 747 aa19.15■□□□□ 0.66
CTC1-203ENST00000578240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.663e-7■■■■□ 21.9
CTC1-203ENST00000578240 TRPM2O94759 1503 aa19.13■□□□□ 0.65
CTC1-203ENST00000578240 NEUROD1Q13562 356 aa19.13■□□□□ 0.65
CTC1-203ENST00000578240 CLTCL1P53675 1640 aa19.12■□□□□ 0.65
CTC1-203ENST00000578240 CLTCQ00610 1675 aaKnown RBP19.09■□□□□ 0.65
CTC1-203ENST00000578240 KANK1Q14678 1352 aa19.07■□□□□ 0.64
CTC1-203ENST00000578240 PTPRTO14522 1441 aa19.07■□□□□ 0.64
CTC1-203ENST00000578240 MROH2AA6NES4 1674 aa19.07■□□□□ 0.64
CTC1-203ENST00000578240 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
CTC1-203ENST00000578240 PREX1Q8TCU6 1659 aa19.06■□□□□ 0.64
CTC1-203ENST00000578240 KIF1BO60333 1816 aa19.05■□□□□ 0.64
CTC1-203ENST00000578240 UGGT1Q9NYU2 1555 aa19.05■□□□□ 0.64
CTC1-203ENST00000578240 TIMELESSQ9UNS1 1208 aa19.05■□□□□ 0.64
CTC1-203ENST00000578240 NPATQ14207 1427 aa19.04■□□□□ 0.64
CTC1-203ENST00000578240 PIK3C2BO00750 1634 aa19.04■□□□□ 0.64
CTC1-203ENST00000578240 SYNMO15061 1565 aa19.03■□□□□ 0.64
CTC1-203ENST00000578240 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
CTC1-203ENST00000578240 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
CTC1-203ENST00000578240 MYO5BQ9ULV0 1848 aa19.01■□□□□ 0.63
CTC1-203ENST00000578240 ARID4BQ4LE39 1312 aaPredicted RBP19■□□□□ 0.63
CTC1-203ENST00000578240 GGT6Q6P531 493 aa19■□□□□ 0.63
CTC1-203ENST00000578240 NEURL4Q96JN8 1562 aa18.99■□□□□ 0.63
CTC1-203ENST00000578240 ARHGAP31Q2M1Z3 1444 aa18.98■□□□□ 0.63
CTC1-203ENST00000578240 PPP1R15AO75807 674 aaPredicted RBP18.98■□□□□ 0.63
CTC1-203ENST00000578240 FER1L4A9Z1Z3 1794 aa18.97■□□□□ 0.63
CTC1-203ENST00000578240 SPATA31E1Q6ZUB1 1445 aa18.97■□□□□ 0.63
CTC1-203ENST00000578240 ADAMTSL3P82987 1691 aa18.96■□□□□ 0.63
CTC1-203ENST00000578240 L3MBTL2Q969R5 705 aa18.96■□□□□ 0.63
CTC1-203ENST00000578240 NOS1P29475 1434 aa18.95■□□□□ 0.62
CTC1-203ENST00000578240 ADGRB3O60242 1522 aa18.94■□□□□ 0.62
CTC1-203ENST00000578240 PPLO60437 1756 aa18.93■□□□□ 0.62
CTC1-203ENST00000578240 TRPM1Q7Z4N2 1603 aa18.93■□□□□ 0.62
CTC1-203ENST00000578240 WASHC2CQ9Y4E1 1318 aa18.93■□□□□ 0.62
CTC1-203ENST00000578240 CNTLNQ9NXG0 1405 aa18.93■□□□□ 0.62
CTC1-203ENST00000578240 MADDQ8WXG6 1647 aa18.91■□□□□ 0.62
CTC1-203ENST00000578240 SPATA31D1Q6ZQQ2 1576 aa18.91■□□□□ 0.62
CTC1-203ENST00000578240 C3P01024 1663 aa18.9■□□□□ 0.62
CTC1-203ENST00000578240 UHRF1BP1Q6BDS2 1440 aa18.9■□□□□ 0.62
CTC1-203ENST00000578240 ERVK-7P63135 1459 aa18.89■□□□□ 0.61
CTC1-203ENST00000578240 PTPRMP28827 1452 aa18.88■□□□□ 0.61
CTC1-203ENST00000578240 NBPF8Q3BBV2 869 aa18.87■□□□□ 0.61
CTC1-203ENST00000578240 TMEM131LA2VDJ0 1609 aa18.86■□□□□ 0.61
CTC1-203ENST00000578240 RIMS1Q86UR5 1692 aaKnown RBP18.85■□□□□ 0.61
CTC1-203ENST00000578240 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
CTC1-203ENST00000578240 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
CTC1-203ENST00000578240 POLR1AO95602 1720 aaPredicted RBP18.84■□□□□ 0.61
CTC1-203ENST00000578240 MLECQ14165 292 aa18.83■□□□□ 0.61
CTC1-203ENST00000578240 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.61
CTC1-203ENST00000578240 LAMC1P11047 1609 aa18.83■□□□□ 0.6
CTC1-203ENST00000578240 KIAA1210Q9ULL0 1709 aa18.82■□□□□ 0.6
CTC1-203ENST00000578240 NEXMIFQ5QGS0 1516 aa18.8■□□□□ 0.6
CTC1-203ENST00000578240 MYOM2P54296 1465 aa18.8■□□□□ 0.6
CTC1-203ENST00000578240 KDM5AP29375 1690 aaKnown RBP18.78■□□□□ 0.6
CTC1-203ENST00000578240 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
CTC1-203ENST00000578240 IQGAP1P46940 1657 aa18.77■□□□□ 0.6
CTC1-203ENST00000578240 RGL3Q3MIN7 710 aa18.77■□□□□ 0.6
CTC1-203ENST00000578240 UBR1Q8IWV7 1749 aa18.77■□□□□ 0.6
CTC1-203ENST00000578240 NRXN1Q9ULB1 1477 aa18.77■□□□□ 0.59
CTC1-203ENST00000578240 FBXO31Q5XUX0 539 aaPredicted RBP18.76■□□□□ 0.59
CTC1-203ENST00000578240 DCAF11Q8TEB1 546 aa18.76■□□□□ 0.59
CTC1-203ENST00000578240 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
CTC1-203ENST00000578240 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
CTC1-203ENST00000578240 MYO3AQ8NEV4 1616 aa18.72■□□□□ 0.59
CTC1-203ENST00000578240 ZNF326Q5BKZ1 582 aaKnown RBP18.71■□□□□ 0.59
CTC1-203ENST00000578240 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms