RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 VWDEQ8N2E2 1590 aa17.06■□□□□ 0.32
CDK5RAP3-204ENST00000577664 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP3-204ENST00000577664 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
CDK5RAP3-204ENST00000577664 A2ML1A8K2U0 1454 aa17.03■□□□□ 0.32
CDK5RAP3-204ENST00000577664 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-204ENST00000577664 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.32
CDK5RAP3-204ENST00000577664 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.32
CDK5RAP3-204ENST00000577664 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.32
CDK5RAP3-204ENST00000577664 SRCAPQ6ZRS2 3230 aa17.01■□□□□ 0.31
CDK5RAP3-204ENST00000577664 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
CDK5RAP3-204ENST00000577664 PLEKHH2Q8IVE3 1493 aa17■□□□□ 0.31
CDK5RAP3-204ENST00000577664 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-204ENST00000577664 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-204ENST00000577664 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
CDK5RAP3-204ENST00000577664 ZNF644Q9H582 1327 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-204ENST00000577664 MBD5Q9P267 1494 aa16.98■□□□□ 0.31
CDK5RAP3-204ENST00000577664 CLTCQ00610 1675 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-204ENST00000577664 SAMD9LQ8IVG5 1584 aa16.97■□□□□ 0.31
CDK5RAP3-204ENST00000577664 TRIM26Q12899 539 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-204ENST00000577664 MED14O60244 1454 aa16.96■□□□□ 0.31
CDK5RAP3-204ENST00000577664 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
CDK5RAP3-204ENST00000577664 ABCC1P33527 1531 aa16.96■□□□□ 0.3
CDK5RAP3-204ENST00000577664 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.3
CDK5RAP3-204ENST00000577664 UPF1Q92900 1129 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDK5RAP3-204ENST00000577664 SYNMO15061 1565 aa16.94■□□□□ 0.3
CDK5RAP3-204ENST00000577664 ARHGEF5Q12774 1597 aa16.94■□□□□ 0.3
CDK5RAP3-204ENST00000577664 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-204ENST00000577664 HNRNPMP52272 730 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDK5RAP3-204ENST00000577664 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-204ENST00000577664 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
CDK5RAP3-204ENST00000577664 DEPDC5O75140 1603 aa16.91■□□□□ 0.3
CDK5RAP3-204ENST00000577664 PLXNC1O60486 1568 aa16.9■□□□□ 0.3
CDK5RAP3-204ENST00000577664 ABCC5O15440 1437 aa16.9■□□□□ 0.3
CDK5RAP3-204ENST00000577664 FAM50AQ14320 339 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-204ENST00000577664 ANKLE2Q86XL3 938 aa16.89■□□□□ 0.29
CDK5RAP3-204ENST00000577664 NPHP4O75161 1426 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-204ENST00000577664 DAPK1P53355 1430 aa16.87■□□□□ 0.29
CDK5RAP3-204ENST00000577664 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
CDK5RAP3-204ENST00000577664 SYCP2Q9BX26 1530 aa16.87■□□□□ 0.29
CDK5RAP3-204ENST00000577664 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
CDK5RAP3-204ENST00000577664 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
CDK5RAP3-204ENST00000577664 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
CDK5RAP3-204ENST00000577664 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
CDK5RAP3-204ENST00000577664 ROCK1Q13464 1354 aa16.84■□□□□ 0.29
CDK5RAP3-204ENST00000577664 MAST1Q9Y2H9 1570 aa16.84■□□□□ 0.29
CDK5RAP3-204ENST00000577664 IQGAP1P46940 1657 aa16.83■□□□□ 0.28
CDK5RAP3-204ENST00000577664 ADGRL2O95490 1459 aa16.82■□□□□ 0.28
CDK5RAP3-204ENST00000577664 TNRQ92752 1358 aa16.81■□□□□ 0.28
CDK5RAP3-204ENST00000577664 THEMISQ8N1K5 641 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-204ENST00000577664 SPAG9O60271 1321 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-204ENST00000577664 CROCC2H7BZ55 1655 aa16.8■□□□□ 0.28
CDK5RAP3-204ENST00000577664 A2MP01023 1474 aa16.8■□□□□ 0.28
CDK5RAP3-204ENST00000577664 GGT6Q6P531 493 aa16.78■□□□□ 0.28
CDK5RAP3-204ENST00000577664 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-204ENST00000577664 ATP7AQ04656 1500 aa16.77■□□□□ 0.28
CDK5RAP3-204ENST00000577664 NLRP1Q9C000 1473 aa16.77■□□□□ 0.28
CDK5RAP3-204ENST00000577664 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.27
CDK5RAP3-204ENST00000577664 UGGT1Q9NYU2 1555 aa16.76■□□□□ 0.27
CDK5RAP3-204ENST00000577664 INO80Q9ULG1 1556 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-204ENST00000577664 PZPP20742 1482 aa16.75■□□□□ 0.27
CDK5RAP3-204ENST00000577664 HRCP23327 699 aa16.75■□□□□ 0.27
CDK5RAP3-204ENST00000577664 HFM1A2PYH4 1435 aa16.75■□□□□ 0.27
CDK5RAP3-204ENST00000577664 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
CDK5RAP3-204ENST00000577664 ITGAEP38570 1179 aa16.74■□□□□ 0.27
CDK5RAP3-204ENST00000577664 ZC3H13Q5T200 1668 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-204ENST00000577664 FBXO31Q5XUX0 539 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-204ENST00000577664 CHIC2Q9UKJ5 165 aa16.73■□□□□ 0.27
CDK5RAP3-204ENST00000577664 NAIPQ13075 1403 aa16.72■□□□□ 0.27
CDK5RAP3-204ENST00000577664 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-204ENST00000577664 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
CDK5RAP3-204ENST00000577664 ACIN1Q9UKV3 1341 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-204ENST00000577664 KDM5DQ9BY66 1539 aa16.71■□□□□ 0.27
CDK5RAP3-204ENST00000577664 ROBO1Q9Y6N7 1651 aa16.71■□□□□ 0.27
CDK5RAP3-204ENST00000577664 DHX29Q7Z478 1369 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-204ENST00000577664 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
CDK5RAP3-204ENST00000577664 KIF15Q9NS87 1388 aa16.69■□□□□ 0.26
CDK5RAP3-204ENST00000577664 RRP7BPQ9NSQ0 103 aa16.69■□□□□ 0.26
CDK5RAP3-204ENST00000577664 DUOX2Q9NRD8 1548 aa16.69■□□□□ 0.26
CDK5RAP3-204ENST00000577664 JCADQ9P266 1359 aa16.68■□□□□ 0.26
CDK5RAP3-204ENST00000577664 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-204ENST00000577664 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
CDK5RAP3-204ENST00000577664 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
CDK5RAP3-204ENST00000577664 ERBINQ96RT1 1412 aa16.66■□□□□ 0.26
CDK5RAP3-204ENST00000577664 ANKRD50Q9ULJ7 1429 aa16.65■□□□□ 0.26
CDK5RAP3-204ENST00000577664 GCC2Q8IWJ2 1684 aa16.64■□□□□ 0.25
CDK5RAP3-204ENST00000577664 LRP6O75581 1613 aa16.63■□□□□ 0.25
CDK5RAP3-204ENST00000577664 RXRBP28702 533 aa16.61■□□□□ 0.25
CDK5RAP3-204ENST00000577664 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
CDK5RAP3-204ENST00000577664 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-204ENST00000577664 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
CDK5RAP3-204ENST00000577664 PHLPP1O60346 1717 aa16.59■□□□□ 0.25
CDK5RAP3-204ENST00000577664 SCAF11Q99590 1463 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-204ENST00000577664 TMEM94Q12767 1356 aa16.58■□□□□ 0.24
CDK5RAP3-204ENST00000577664 COL16A1Q07092 1604 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-204ENST00000577664 ARHGAP23Q9P227 1491 aa16.56■□□□□ 0.24
CDK5RAP3-204ENST00000577664 KIF3BO15066 747 aa16.55■□□□□ 0.24
CDK5RAP3-204ENST00000577664 SLIT1O75093 1534 aa16.55■□□□□ 0.24
CDK5RAP3-204ENST00000577664 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
CDK5RAP3-204ENST00000577664 SETBP1Q9Y6X0 1596 aa16.53■□□□□ 0.24
CDK5RAP3-204ENST00000577664 FOXD1Q16676 465 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms