RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.686e-8■■□□□ 14.5
NPLOC4-214ENST00000573876 CNTLNQ9NXG0 1405 aa19.32■□□□□ 0.68
NPLOC4-214ENST00000573876 WASHC2CQ9Y4E1 1318 aa19.31■□□□□ 0.68
NPLOC4-214ENST00000573876 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
NPLOC4-214ENST00000573876 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
NPLOC4-214ENST00000573876 KANK1Q14678 1352 aa19.31■□□□□ 0.68
NPLOC4-214ENST00000573876 NAIPQ13075 1403 aa19.3■□□□□ 0.68
NPLOC4-214ENST00000573876 RNF17Q9BXT8 1623 aaKnown RBP19.29■□□□□ 0.68
NPLOC4-214ENST00000573876 RIMS1Q86UR5 1692 aaKnown RBP19.28■□□□□ 0.68
NPLOC4-214ENST00000573876 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
NPLOC4-214ENST00000573876 FAM135AQ9P2D6 1515 aa19.27■□□□□ 0.68
NPLOC4-214ENST00000573876 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
NPLOC4-214ENST00000573876 PTPRMP28827 1452 aa19.26■□□□□ 0.67
NPLOC4-214ENST00000573876 GCC2Q8IWJ2 1684 aa19.26■□□□□ 0.67
NPLOC4-214ENST00000573876 KDM5DQ9BY66 1539 aa19.25■□□□□ 0.67
NPLOC4-214ENST00000573876 DEPDC5O75140 1603 aa19.23■□□□□ 0.67
NPLOC4-214ENST00000573876 PRDM15P57071 1507 aaPredicted RBP19.23■□□□□ 0.67
NPLOC4-214ENST00000573876 CLTCQ00610 1675 aaKnown RBP19.23■□□□□ 0.67
NPLOC4-214ENST00000573876 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
NPLOC4-214ENST00000573876 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
NPLOC4-214ENST00000573876 SETD5Q9C0A6 1442 aa19.22■□□□□ 0.67
NPLOC4-214ENST00000573876 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
NPLOC4-214ENST00000573876 MROH2AA6NES4 1674 aa19.2■□□□□ 0.66
NPLOC4-214ENST00000573876 ABCC3O15438 1527 aa19.2■□□□□ 0.66
NPLOC4-214ENST00000573876 NUP155O75694 1391 aa19.2■□□□□ 0.66
NPLOC4-214ENST00000573876 CEBPAP49715 358 aaPredicted RBP19.2■□□□□ 0.66
NPLOC4-214ENST00000573876 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
NPLOC4-214ENST00000573876 ZC3H13Q5T200 1668 aaKnown RBP19.2■□□□□ 0.66
NPLOC4-214ENST00000573876 UNC13BO14795 1591 aa19.19■□□□□ 0.66
NPLOC4-214ENST00000573876 VWDEQ8N2E2 1590 aa19.16■□□□□ 0.66
NPLOC4-214ENST00000573876 CEP152O94986 1710 aa19.16■□□□□ 0.66
NPLOC4-214ENST00000573876 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
NPLOC4-214ENST00000573876 C3P01024 1663 aa19.15■□□□□ 0.66
NPLOC4-214ENST00000573876 RAB3GAP2Q9H2M9 1393 aa19.14■□□□□ 0.65
NPLOC4-214ENST00000573876 PZPP20742 1482 aa19.14■□□□□ 0.65
NPLOC4-214ENST00000573876 HRCP23327 699 aa19.13■□□□□ 0.65
NPLOC4-214ENST00000573876 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
NPLOC4-214ENST00000573876 CAMSAP1Q5T5Y3 1602 aa19.12■□□□□ 0.65
NPLOC4-214ENST00000573876 NPATQ14207 1427 aa19.12■□□□□ 0.65
NPLOC4-214ENST00000573876 ARHGAP31Q2M1Z3 1444 aa19.12■□□□□ 0.65
NPLOC4-214ENST00000573876 IQGAP3Q86VI3 1631 aa19.11■□□□□ 0.65
NPLOC4-214ENST00000573876 FBXO31Q5XUX0 539 aaPredicted RBP19.1■□□□□ 0.65
NPLOC4-214ENST00000573876 TET3O43151 1660 aa19.09■□□□□ 0.65
NPLOC4-214ENST00000573876 SLC4A1APQ9BWU0 796 aaKnown RBP19.09■□□□□ 0.65
NPLOC4-214ENST00000573876 EFCAB6Q5THR3 1501 aa19.09■□□□□ 0.65
NPLOC4-214ENST00000573876 CFAP65Q6ZU64 1925 aaKnown RBP19.08■□□□□ 0.65
NPLOC4-214ENST00000573876 TNRQ92752 1358 aa19.07■□□□□ 0.64
NPLOC4-214ENST00000573876 ERVK-7P63135 1459 aa19.06■□□□□ 0.64
NPLOC4-214ENST00000573876 RPRD2Q5VT52 1461 aaKnown RBP19.06■□□□□ 0.64
NPLOC4-214ENST00000573876 UHRF1BP1Q6BDS2 1440 aa19.05■□□□□ 0.64
NPLOC4-214ENST00000573876 PKD2Q13563 968 aa19.04■□□□□ 0.64
NPLOC4-214ENST00000573876 MPHOSPH9Q99550 1183 aa19.03■□□□□ 0.64
NPLOC4-214ENST00000573876 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.64
NPLOC4-214ENST00000573876 PREX1Q8TCU6 1659 aa19.01■□□□□ 0.63
NPLOC4-214ENST00000573876 E9PCH4 1651 aa19■□□□□ 0.63
NPLOC4-214ENST00000573876 NOS1P29475 1434 aa19■□□□□ 0.63
NPLOC4-214ENST00000573876 NLRP1Q9C000 1473 aa18.99■□□□□ 0.63
NPLOC4-214ENST00000573876 SLC52A1Q9NWF4 448 aa18.99■□□□□ 0.63
NPLOC4-214ENST00000573876 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
NPLOC4-214ENST00000573876 A2ML1A8K2U0 1454 aa18.96■□□□□ 0.63
NPLOC4-214ENST00000573876 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
NPLOC4-214ENST00000573876 LMTK3Q96Q04 1460 aa18.95■□□□□ 0.62
NPLOC4-214ENST00000573876 IDI1Q13907 227 aa18.94■□□□□ 0.62
NPLOC4-214ENST00000573876 FOXD1Q16676 465 aa18.94■□□□□ 0.62
NPLOC4-214ENST00000573876 CEP170BQ9Y4F5 1589 aaPredicted RBP18.93■□□□□ 0.62
NPLOC4-214ENST00000573876 PTPRTO14522 1441 aa18.93■□□□□ 0.62
NPLOC4-214ENST00000573876 THEMISQ8N1K5 641 aaPredicted RBP18.93■□□□□ 0.62
NPLOC4-214ENST00000573876 SYNMO15061 1565 aa18.93■□□□□ 0.62
NPLOC4-214ENST00000573876 HSPA2P54652 639 aa18.92■□□□□ 0.62
NPLOC4-214ENST00000573876 SPHKAPQ2M3C7 1700 aa18.91■□□□□ 0.62
NPLOC4-214ENST00000573876 ZNF142P52746 1687 aaPredicted RBP18.9■□□□□ 0.62
NPLOC4-214ENST00000573876 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
NPLOC4-214ENST00000573876 UGGT1Q9NYU2 1555 aa18.89■□□□□ 0.62
NPLOC4-214ENST00000573876 TRPM2O94759 1503 aa18.89■□□□□ 0.61
NPLOC4-214ENST00000573876 PLA2R1Q13018 1463 aa18.86■□□□□ 0.61
NPLOC4-214ENST00000573876 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
NPLOC4-214ENST00000573876 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
NPLOC4-214ENST00000573876 CCDC144AA2RUR9 1427 aa18.85■□□□□ 0.61
NPLOC4-214ENST00000573876 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
NPLOC4-214ENST00000573876 ADGRB3O60242 1522 aa18.84■□□□□ 0.61
NPLOC4-214ENST00000573876 ANKLE2Q86XL3 938 aa18.83■□□□□ 0.6
NPLOC4-214ENST00000573876 UBR1Q8IWV7 1749 aa18.83■□□□□ 0.6
NPLOC4-214ENST00000573876 HDGFP51858 240 aaKnown RBP18.82■□□□□ 0.6
NPLOC4-214ENST00000573876 EID1Q9Y6B2 187 aa18.82■□□□□ 0.6
NPLOC4-214ENST00000573876 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
NPLOC4-214ENST00000573876 ANKRD30BQ9BXX2 1392 aa18.81■□□□□ 0.6
NPLOC4-214ENST00000573876 ZNF326Q5BKZ1 582 aaKnown RBP18.81■□□□□ 0.6
NPLOC4-214ENST00000573876 CLTCL1P53675 1640 aa18.81■□□□□ 0.6
NPLOC4-214ENST00000573876 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
NPLOC4-214ENST00000573876 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
NPLOC4-214ENST00000573876 KIF1BO60333 1816 aa18.79■□□□□ 0.6
NPLOC4-214ENST00000573876 NCKAP5LQ9HCH0 1330 aa18.78■□□□□ 0.6
NPLOC4-214ENST00000573876 TXNDC2Q86VQ3 553 aa18.78■□□□□ 0.6
NPLOC4-214ENST00000573876 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.78■□□□□ 0.6
NPLOC4-214ENST00000573876 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
NPLOC4-214ENST00000573876 SLIT1O75093 1534 aa18.76■□□□□ 0.59
NPLOC4-214ENST00000573876 PPP1R15AO75807 674 aaPredicted RBP18.76■□□□□ 0.59
NPLOC4-214ENST00000573876 SIN3AQ96ST3 1273 aa18.76■□□□□ 0.59
NPLOC4-214ENST00000573876 ARHGAP23Q9P227 1491 aa18.76■□□□□ 0.59
NPLOC4-214ENST00000573876 RIMS2Q9UQ26 1411 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms