RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 RNF17Q9BXT8 1623 aaKnown RBP12.06□□□□□ -0.48
SMG6-211ENST00000572369 SPAG9O60271 1321 aaKnown RBP12.06□□□□□ -0.48
SMG6-211ENST00000572369 AGLP35573 1532 aa12.06□□□□□ -0.48
SMG6-211ENST00000572369 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
SMG6-211ENST00000572369 KIDINS220Q9ULH0 1771 aa12.05□□□□□ -0.48
SMG6-211ENST00000572369 MYOM3Q5VTT5 1437 aa12.05□□□□□ -0.48
SMG6-211ENST00000572369 CNTLNQ9NXG0 1405 aa12.05□□□□□ -0.48
SMG6-211ENST00000572369 ABCA6Q8N139 1617 aa12.05□□□□□ -0.48
SMG6-211ENST00000572369 MLH3Q9UHC1 1453 aa12.05□□□□□ -0.48
SMG6-211ENST00000572369 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
SMG6-211ENST00000572369 DIP2CQ9Y2E4 1556 aa12.04□□□□□ -0.48
SMG6-211ENST00000572369 ATP7AQ04656 1500 aa12.03□□□□□ -0.48
SMG6-211ENST00000572369 VWDEQ8N2E2 1590 aa12.03□□□□□ -0.48
SMG6-211ENST00000572369 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
SMG6-211ENST00000572369 LRRC7Q96NW7 1537 aa12.02□□□□□ -0.48
SMG6-211ENST00000572369 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
SMG6-211ENST00000572369 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.49
SMG6-211ENST00000572369 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
SMG6-211ENST00000572369 PTPN23Q9H3S7 1636 aa12.01□□□□□ -0.49
SMG6-211ENST00000572369 TSPY4P0CV99 314 aa12.01□□□□□ -0.49
SMG6-211ENST00000572369 TSPY10P0CW01 314 aa12.01□□□□□ -0.49
SMG6-211ENST00000572369 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
SMG6-211ENST00000572369 TRIM52Q96A61 297 aa12.01□□□□□ -0.49
SMG6-211ENST00000572369 MBD5Q9P267 1494 aa12.01□□□□□ -0.49
SMG6-211ENST00000572369 NEURL4Q96JN8 1562 aa12.01□□□□□ -0.49
SMG6-211ENST00000572369 MROH2AA6NES4 1674 aa12□□□□□ -0.49
SMG6-211ENST00000572369 ARHGEF5Q12774 1597 aa12□□□□□ -0.49
SMG6-211ENST00000572369 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
SMG6-211ENST00000572369 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
SMG6-211ENST00000572369 SETBP1Q9Y6X0 1596 aa11.98□□□□□ -0.49
SMG6-211ENST00000572369 FGD6Q6ZV73 1430 aa11.98□□□□□ -0.49
SMG6-211ENST00000572369 FAM50AQ14320 339 aaKnown RBP11.97□□□□□ -0.49
SMG6-211ENST00000572369 SYNMO15061 1565 aa11.96□□□□□ -0.49
SMG6-211ENST00000572369 A2MP01023 1474 aa11.96□□□□□ -0.49
SMG6-211ENST00000572369 RTEL1-TNFRSF6BF6WH68 1400 aa11.96□□□□□ -0.49
SMG6-211ENST00000572369 CROCC2H7BZ55 1655 aa11.95□□□□□ -0.5
SMG6-211ENST00000572369 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
SMG6-211ENST00000572369 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
SMG6-211ENST00000572369 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
SMG6-211ENST00000572369 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
SMG6-211ENST00000572369 MAST1Q9Y2H9 1570 aa11.93□□□□□ -0.5
SMG6-211ENST00000572369 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
SMG6-211ENST00000572369 GGT6Q6P531 493 aa11.92□□□□□ -0.5
SMG6-211ENST00000572369 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
SMG6-211ENST00000572369 A2ML1A8K2U0 1454 aa11.91□□□□□ -0.5
SMG6-211ENST00000572369 FOXD1Q16676 465 aa11.91□□□□□ -0.5
SMG6-211ENST00000572369 DAPK1P53355 1430 aa11.91□□□□□ -0.5
SMG6-211ENST00000572369 FAM135BQ49AJ0 1406 aa11.91□□□□□ -0.5
SMG6-211ENST00000572369 DHX29Q7Z478 1369 aaKnown RBP11.91□□□□□ -0.5
SMG6-211ENST00000572369 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.5
SMG6-211ENST00000572369 CHIC2Q9UKJ5 165 aa11.9□□□□□ -0.5
SMG6-211ENST00000572369 ABCC5O15440 1437 aa11.89□□□□□ -0.51
SMG6-211ENST00000572369 KIF3BO15066 747 aa11.89□□□□□ -0.51
SMG6-211ENST00000572369 ZNF772Q68DY9 489 aaPredicted RBP11.89□□□□□ -0.51
SMG6-211ENST00000572369 CLTCQ00610 1675 aaKnown RBP11.88□□□□□ -0.51
SMG6-211ENST00000572369 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
SMG6-211ENST00000572369 RXRBP28702 533 aa11.87□□□□□ -0.51
SMG6-211ENST00000572369 ITGAEP38570 1179 aa11.87□□□□□ -0.51
SMG6-211ENST00000572369 ANKRD30AQ9BXX3 1397 aa11.87□□□□□ -0.51
SMG6-211ENST00000572369 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
SMG6-211ENST00000572369 KIF15Q9NS87 1388 aa11.86□□□□□ -0.51
SMG6-211ENST00000572369 EIF2AK4Q9P2K8 1649 aaKnown RBP11.86□□□□□ -0.51
SMG6-211ENST00000572369 NPHP4O75161 1426 aaPredicted RBP11.85□□□□□ -0.51
SMG6-211ENST00000572369 MED14O60244 1454 aa11.84□□□□□ -0.51
SMG6-211ENST00000572369 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
SMG6-211ENST00000572369 WASHC2CQ9Y4E1 1318 aa11.84□□□□□ -0.51
SMG6-211ENST00000572369 LRP5O75197 1615 aa11.83□□□□□ -0.52
SMG6-211ENST00000572369 LRP6O75581 1613 aa11.83□□□□□ -0.52
SMG6-211ENST00000572369 JCADQ9P266 1359 aa11.83□□□□□ -0.52
SMG6-211ENST00000572369 DEPDC5O75140 1603 aa11.82□□□□□ -0.52
SMG6-211ENST00000572369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMG6-211ENST00000572369 IQGAP1P46940 1657 aa11.82□□□□□ -0.52
SMG6-211ENST00000572369 ANKLE2Q86XL3 938 aa11.82□□□□□ -0.52
SMG6-211ENST00000572369 ERBINQ96RT1 1412 aa11.82□□□□□ -0.52
SMG6-211ENST00000572369 KDM5DQ9BY66 1539 aa11.81□□□□□ -0.52
SMG6-211ENST00000572369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.526e-8■■■■□ 25.6
SMG6-211ENST00000572369 ADGRL2O95490 1459 aa11.81□□□□□ -0.52
SMG6-211ENST00000572369 CEP152O94986 1710 aa11.8□□□□□ -0.52
SMG6-211ENST00000572369 RGS12O14924 1447 aa11.8□□□□□ -0.52
SMG6-211ENST00000572369 MEX3CQ5U5Q3 659 aaKnown RBP11.8□□□□□ -0.52
SMG6-211ENST00000572369 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
SMG6-211ENST00000572369 FAM135AQ9P2D6 1515 aa11.8□□□□□ -0.52
SMG6-211ENST00000572369 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
SMG6-211ENST00000572369 RRBP1Q9P2E9 1410 aaKnown RBP11.79□□□□□ -0.52
SMG6-211ENST00000572369 KANK1Q14678 1352 aa11.79□□□□□ -0.52
SMG6-211ENST00000572369 PHLPP1O60346 1717 aa11.77□□□□□ -0.53
SMG6-211ENST00000572369 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
SMG6-211ENST00000572369 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
SMG6-211ENST00000572369 MROH1Q8NDA8 1641 aa11.76□□□□□ -0.53
SMG6-211ENST00000572369 NUTM2BA6NNL0 878 aaPredicted RBP11.76□□□□□ -0.53
SMG6-211ENST00000572369 NUTM2EB1AL46 878 aaPredicted RBP11.76□□□□□ -0.53
SMG6-211ENST00000572369 NUTM2DQ5VT03 806 aaPredicted RBP11.76□□□□□ -0.53
SMG6-211ENST00000572369 NUTM2AQ8IVF1 878 aaPredicted RBP11.76□□□□□ -0.53
SMG6-211ENST00000572369 YY1P25490 414 aa11.75□□□□□ -0.53
SMG6-211ENST00000572369 SPATA31A6Q5VVP1 1343 aa11.75□□□□□ -0.53
SMG6-211ENST00000572369 ROCK1Q13464 1354 aa11.75□□□□□ -0.53
SMG6-211ENST00000572369 ATAD2Q6PL18 1390 aa11.75□□□□□ -0.53
SMG6-211ENST00000572369 ABCC3O15438 1527 aa11.75□□□□□ -0.53
SMG6-211ENST00000572369 PRDM15P57071 1507 aaPredicted RBP11.75□□□□□ -0.53
SMG6-211ENST00000572369 PZPP20742 1482 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms