RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-203ENST00000571351 CCER1Q8TC90 406 aaPredicted RBP30.32■■■□□ 2.44
TNFRSF12A-203ENST00000571351 RNF17Q9BXT8 1623 aaKnown RBP30.3■■■□□ 2.44
TNFRSF12A-203ENST00000571351 AGLP35573 1532 aa30.3■■■□□ 2.44
TNFRSF12A-203ENST00000571351 KDM5DQ9BY66 1539 aa30.29■■■□□ 2.44
TNFRSF12A-203ENST00000571351 DHX57Q6P158 1386 aaKnown RBP30.28■■■□□ 2.44
TNFRSF12A-203ENST00000571351 TRIM52Q96A61 297 aa30.28■■■□□ 2.44
TNFRSF12A-203ENST00000571351 PZPP20742 1482 aa30.27■■■□□ 2.44
TNFRSF12A-203ENST00000571351 PRDM15P57071 1507 aaPredicted RBP30.26■■■□□ 2.43
TNFRSF12A-203ENST00000571351 NUP155O75694 1391 aa30.25■■■□□ 2.43
TNFRSF12A-203ENST00000571351 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
TNFRSF12A-203ENST00000571351 VWDEQ8N2E2 1590 aa30.23■■■□□ 2.43
TNFRSF12A-203ENST00000571351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.23■■■□□ 2.43
TNFRSF12A-203ENST00000571351 IQGAP3Q86VI3 1631 aa30.23■■■□□ 2.43
TNFRSF12A-203ENST00000571351 ZEB1P37275 1124 aaPredicted RBP30.21■■■□□ 2.43
TNFRSF12A-203ENST00000571351 FAM135AQ9P2D6 1515 aa30.2■■■□□ 2.43
TNFRSF12A-203ENST00000571351 GGT6Q6P531 493 aa30.18■■■□□ 2.42
TNFRSF12A-203ENST00000571351 MPHOSPH9Q99550 1183 aa30.18■■■□□ 2.42
TNFRSF12A-203ENST00000571351 CLSPNQ9HAW4 1339 aa30.18■■■□□ 2.42
TNFRSF12A-203ENST00000571351 SLC4A1APQ9BWU0 796 aaKnown RBP30.14■■■□□ 2.41
TNFRSF12A-203ENST00000571351 CEP152O94986 1710 aa30.13■■■□□ 2.41
TNFRSF12A-203ENST00000571351 KANK1Q14678 1352 aa30.1■■■□□ 2.41
TNFRSF12A-203ENST00000571351 ABCC3O15438 1527 aa30.1■■■□□ 2.41
TNFRSF12A-203ENST00000571351 LMTK2Q8IWU2 1503 aa30.1■■■□□ 2.41
TNFRSF12A-203ENST00000571351 ARID4BQ4LE39 1312 aaPredicted RBP30.09■■■□□ 2.41
TNFRSF12A-203ENST00000571351 TET3O43151 1660 aa30.08■■■□□ 2.41
TNFRSF12A-203ENST00000571351 MLECQ14165 292 aa30.07■■■□□ 2.41
TNFRSF12A-203ENST00000571351 FOXD1Q16676 465 aa30.07■■■□□ 2.4
TNFRSF12A-203ENST00000571351 PKD2Q13563 968 aa30.06■■■□□ 2.4
TNFRSF12A-203ENST00000571351 ZC3H13Q5T200 1668 aaKnown RBP30.05■■■□□ 2.4
TNFRSF12A-203ENST00000571351 E9PCH4 1651 aa30.04■■■□□ 2.4
TNFRSF12A-203ENST00000571351 WASHC2CQ9Y4E1 1318 aa30.04■■■□□ 2.4
TNFRSF12A-203ENST00000571351 EFCAB6Q5THR3 1501 aa30.03■■■□□ 2.4
TNFRSF12A-203ENST00000571351 PPP6R1Q9UPN7 881 aa30.01■■■□□ 2.4
TNFRSF12A-203ENST00000571351 CAMSAP1Q5T5Y3 1602 aa30.01■■■□□ 2.39
TNFRSF12A-203ENST00000571351 CLTCQ00610 1675 aaKnown RBP30■■■□□ 2.39
TNFRSF12A-203ENST00000571351 ANKRD30BQ9BXX2 1392 aa29.96■■■□□ 2.39
TNFRSF12A-203ENST00000571351 NPATQ14207 1427 aa29.95■■■□□ 2.38
TNFRSF12A-203ENST00000571351 PLA2R1Q13018 1463 aa29.93■■■□□ 2.38
TNFRSF12A-203ENST00000571351 ARHGAP31Q2M1Z3 1444 aa29.93■■■□□ 2.38
TNFRSF12A-203ENST00000571351 FER1L4A9Z1Z3 1794 aa29.91■■■□□ 2.38
TNFRSF12A-203ENST00000571351 CFAP65Q6ZU64 1925 aaKnown RBP29.91■■■□□ 2.38
TNFRSF12A-203ENST00000571351 ADAMTSL3P82987 1691 aa29.9■■■□□ 2.38
TNFRSF12A-203ENST00000571351 RPRD2Q5VT52 1461 aaKnown RBP29.9■■■□□ 2.38
TNFRSF12A-203ENST00000571351 SPHKAPQ2M3C7 1700 aa29.88■■■□□ 2.37
TNFRSF12A-203ENST00000571351 PTPRTO14522 1441 aa29.87■■■□□ 2.37
TNFRSF12A-203ENST00000571351 SIN3AQ96ST3 1273 aa29.87■■■□□ 2.37
TNFRSF12A-203ENST00000571351 MROH2AA6NES4 1674 aa29.87■■■□□ 2.37
TNFRSF12A-203ENST00000571351 MADDQ8WXG6 1647 aa29.87■■■□□ 2.37
TNFRSF12A-203ENST00000571351 CNTLNQ9NXG0 1405 aa29.86■■■□□ 2.37
TNFRSF12A-203ENST00000571351 ZMYM3Q14202 1370 aa29.84■■■□□ 2.37
TNFRSF12A-203ENST00000571351 ESF1Q9H501 851 aaKnown RBP29.82■■■□□ 2.36
TNFRSF12A-203ENST00000571351 TRPM2O94759 1503 aa29.82■■■□□ 2.36
TNFRSF12A-203ENST00000571351 PREX1Q8TCU6 1659 aa29.82■■■□□ 2.36
TNFRSF12A-203ENST00000571351 NOS1P29475 1434 aa29.81■■■□□ 2.36
TNFRSF12A-203ENST00000571351 RIMS1Q86UR5 1692 aaKnown RBP29.79■■■□□ 2.36
TNFRSF12A-203ENST00000571351 FBXO31Q5XUX0 539 aaPredicted RBP29.79■■■□□ 2.36
TNFRSF12A-203ENST00000571351 C3P01024 1663 aa29.78■■■□□ 2.36
TNFRSF12A-203ENST00000571351 SYNMO15061 1565 aa29.78■■■□□ 2.36
TNFRSF12A-203ENST00000571351 ERVK-7P63135 1459 aa29.77■■■□□ 2.36
TNFRSF12A-203ENST00000571351 UGGT1Q9NYU2 1555 aa29.76■■■□□ 2.35
TNFRSF12A-203ENST00000571351 CLTCL1P53675 1640 aa29.75■■■□□ 2.35
TNFRSF12A-203ENST00000571351 SPATA31D1Q6ZQQ2 1576 aa29.75■■■□□ 2.35
TNFRSF12A-203ENST00000571351 NEUROD1Q13562 356 aa29.75■■■□□ 2.35
TNFRSF12A-203ENST00000571351 CCDC144AA2RUR9 1427 aa29.74■■■□□ 2.35
TNFRSF12A-203ENST00000571351 CEBPAP49715 358 aaPredicted RBP29.72■■■□□ 2.35
TNFRSF12A-203ENST00000571351 PIK3C2BO00750 1634 aa29.71■■■□□ 2.35
TNFRSF12A-203ENST00000571351 TIMELESSQ9UNS1 1208 aa29.66■■■□□ 2.34
TNFRSF12A-203ENST00000571351 SPATA31E1Q6ZUB1 1445 aa29.61■■■□□ 2.33
TNFRSF12A-203ENST00000571351 KDM4FA0A1W2PPD8 638 aa29.61■■■□□ 2.33
TNFRSF12A-203ENST00000571351 IDI1Q13907 227 aa29.61■■■□□ 2.33
TNFRSF12A-203ENST00000571351 PTPRMP28827 1452 aa29.61■■■□□ 2.33
TNFRSF12A-203ENST00000571351 KIF1BO60333 1816 aa29.6■■■□□ 2.33
TNFRSF12A-203ENST00000571351 SLC52A1Q9NWF4 448 aa29.6■■■□□ 2.33
TNFRSF12A-203ENST00000571351 TNRQ92752 1358 aa29.59■■■□□ 2.33
TNFRSF12A-203ENST00000571351 PLPPR3Q6T4P5 718 aa29.59■■■□□ 2.33
TNFRSF12A-203ENST00000571351 TONSLQ96HA7 1378 aa29.56■■■□□ 2.32
TNFRSF12A-203ENST00000571351 NEURL4Q96JN8 1562 aa29.56■■■□□ 2.32
TNFRSF12A-203ENST00000571351 ADGRB3O60242 1522 aa29.55■■■□□ 2.32
TNFRSF12A-203ENST00000571351 L3MBTL2Q969R5 705 aa29.54■■■□□ 2.32
TNFRSF12A-203ENST00000571351 MYO5BQ9ULV0 1848 aa29.53■■■□□ 2.32
TNFRSF12A-203ENST00000571351 TMEM131LA2VDJ0 1609 aa29.53■■■□□ 2.32
TNFRSF12A-203ENST00000571351 RGL3Q3MIN7 710 aa29.5■■■□□ 2.31
TNFRSF12A-203ENST00000571351 SETD1BQ9UPS6 1966 aaKnown RBP29.49■■■□□ 2.31
TNFRSF12A-203ENST00000571351 MYO3AQ8NEV4 1616 aa29.49■■■□□ 2.31
TNFRSF12A-203ENST00000571351 NLRP1Q9C000 1473 aa29.48■■■□□ 2.31
TNFRSF12A-203ENST00000571351 CHGAP10645 457 aaKnown RBP29.46■■■□□ 2.31
TNFRSF12A-203ENST00000571351 UBR1Q8IWV7 1749 aa29.45■■■□□ 2.3
TNFRSF12A-203ENST00000571351 A2ML1A8K2U0 1454 aa29.44■■■□□ 2.3
TNFRSF12A-203ENST00000571351 IFT172Q9UG01 1749 aa29.44■■■□□ 2.3
TNFRSF12A-203ENST00000571351 KDM5AP29375 1690 aaKnown RBP29.43■■■□□ 2.3
TNFRSF12A-203ENST00000571351 PPP1R15AO75807 674 aaPredicted RBP29.43■■■□□ 2.3
TNFRSF12A-203ENST00000571351 DCAF11Q8TEB1 546 aa29.4■■■□□ 2.3
TNFRSF12A-203ENST00000571351 PPLO60437 1756 aa29.39■■■□□ 2.3
TNFRSF12A-203ENST00000571351 NEXMIFQ5QGS0 1516 aa29.38■■■□□ 2.29
TNFRSF12A-203ENST00000571351 CEP170BQ9Y4F5 1589 aaPredicted RBP29.38■■■□□ 2.29
TNFRSF12A-203ENST00000571351 ZNF142P52746 1687 aaPredicted RBP29.38■■■□□ 2.29
TNFRSF12A-203ENST00000571351 ZNF326Q5BKZ1 582 aaKnown RBP29.37■■■□□ 2.29
TNFRSF12A-203ENST00000571351 STAG3Q9UJ98 1225 aa29.36■■■□□ 2.29
TNFRSF12A-203ENST00000571351 KDM2AQ9Y2K7 1162 aa29.35■■■□□ 2.29
TNFRSF12A-203ENST00000571351 NBPF8Q3BBV2 869 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms