RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CCDC144AA2RUR9 1427 aa25.39■■□□□ 1.65
SMPD3-211ENST00000568373 ADGRL1O94910 1474 aa25.38■■□□□ 1.65
SMPD3-211ENST00000568373 INO80Q9ULG1 1556 aaPredicted RBP25.38■■□□□ 1.65
SMPD3-211ENST00000568373 PLA2R1Q13018 1463 aa25.38■■□□□ 1.65
SMPD3-211ENST00000568373 RALGAPBQ86X10 1494 aa25.37■■□□□ 1.65
SMPD3-211ENST00000568373 CCDC7Q96M83 1385 aa25.37■■□□□ 1.65
SMPD3-211ENST00000568373 ZNF326Q5BKZ1 582 aaKnown RBP25.37■■□□□ 1.65
SMPD3-211ENST00000568373 POLR1AO95602 1720 aaPredicted RBP25.37■■□□□ 1.65
SMPD3-211ENST00000568373 ATP7AQ04656 1500 aa25.36■■□□□ 1.65
SMPD3-211ENST00000568373 C11orf95C9JLR9 678 aaPredicted RBP25.35■■□□□ 1.65
SMPD3-211ENST00000568373 SCAPERQ9BY12 1400 aa25.35■■□□□ 1.65
SMPD3-211ENST00000568373 ATP10AO60312 1499 aa25.34■■□□□ 1.65
SMPD3-211ENST00000568373 CNTLNQ9NXG0 1405 aa25.33■■□□□ 1.65
SMPD3-211ENST00000568373 USP47Q96K76 1375 aa25.33■■□□□ 1.64
SMPD3-211ENST00000568373 KDM5CP41229 1560 aa25.31■■□□□ 1.64
SMPD3-211ENST00000568373 DCAF11Q8TEB1 546 aa25.3■■□□□ 1.64
SMPD3-211ENST00000568373 DEPDC5O75140 1603 aa25.3■■□□□ 1.64
SMPD3-211ENST00000568373 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
SMPD3-211ENST00000568373 KIF7Q2M1P5 1343 aa25.28■■□□□ 1.64
SMPD3-211ENST00000568373 CFAP74Q9C0B2 1584 aa25.26■■□□□ 1.63
SMPD3-211ENST00000568373 CD109Q6YHK3 1445 aa25.25■■□□□ 1.63
SMPD3-211ENST00000568373 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
SMPD3-211ENST00000568373 E9PCH4 1651 aa25.23■■□□□ 1.63
SMPD3-211ENST00000568373 CARD11Q9BXL7 1154 aa25.23■■□□□ 1.63
SMPD3-211ENST00000568373 ZNF518AQ6AHZ1 1483 aa25.23■■□□□ 1.63
SMPD3-211ENST00000568373 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
SMPD3-211ENST00000568373 A2MP01023 1474 aa25.22■■□□□ 1.63
SMPD3-211ENST00000568373 PRAG1Q86YV5 1406 aa25.22■■□□□ 1.63
SMPD3-211ENST00000568373 DHX29Q7Z478 1369 aaKnown RBP25.21■■□□□ 1.63
SMPD3-211ENST00000568373 KIDINS220Q9ULH0 1771 aa25.21■■□□□ 1.63
SMPD3-211ENST00000568373 MYT1LQ9UL68 1186 aa25.21■■□□□ 1.63
SMPD3-211ENST00000568373 VWDEQ8N2E2 1590 aa25.2■■□□□ 1.62
SMPD3-211ENST00000568373 TRPM1Q7Z4N2 1603 aa25.2■■□□□ 1.62
SMPD3-211ENST00000568373 RGL3Q3MIN7 710 aa25.19■■□□□ 1.62
SMPD3-211ENST00000568373 TET3O43151 1660 aa25.19■■□□□ 1.62
SMPD3-211ENST00000568373 KANK1Q14678 1352 aa25.18■■□□□ 1.62
SMPD3-211ENST00000568373 ARID4BQ4LE39 1312 aaPredicted RBP25.18■■□□□ 1.62
SMPD3-211ENST00000568373 PRDM15P57071 1507 aaPredicted RBP25.17■■□□□ 1.62
SMPD3-211ENST00000568373 ROCK2O75116 1388 aaKnown RBP25.17■■□□□ 1.62
SMPD3-211ENST00000568373 TRPM2O94759 1503 aa25.17■■□□□ 1.62
SMPD3-211ENST00000568373 KIF3BO15066 747 aa25.16■■□□□ 1.62
SMPD3-211ENST00000568373 POGZQ7Z3K3 1410 aa25.15■■□□□ 1.62
SMPD3-211ENST00000568373 SPHKAPQ2M3C7 1700 aa25.15■■□□□ 1.62
SMPD3-211ENST00000568373 MROH1Q8NDA8 1641 aa25.15■■□□□ 1.62
SMPD3-211ENST00000568373 PTPRTO14522 1441 aa25.15■■□□□ 1.62
SMPD3-211ENST00000568373 GPRASP1Q5JY77 1395 aa25.1■■□□□ 1.61
SMPD3-211ENST00000568373 MLH3Q9UHC1 1453 aa25.1■■□□□ 1.61
SMPD3-211ENST00000568373 LAMC1P11047 1609 aa25.1■■□□□ 1.61
SMPD3-211ENST00000568373 PRKRIP1Q9H875 184 aaPredicted RBP25.09■■□□□ 1.61
SMPD3-211ENST00000568373 CEP152O94986 1710 aa25.09■■□□□ 1.61
SMPD3-211ENST00000568373 NEO1Q92859 1461 aa25.09■■□□□ 1.61
SMPD3-211ENST00000568373 ST20-MTHFSA0A0A6YYL1 179 aa25.09■■□□□ 1.61
SMPD3-211ENST00000568373 FAM69CQ0P6D2 419 aa25.09■■□□□ 1.61
SMPD3-211ENST00000568373 HECW2Q9P2P5 1572 aa25.08■■□□□ 1.61
SMPD3-211ENST00000568373 CLTCL1P53675 1640 aa25.07■■□□□ 1.6
SMPD3-211ENST00000568373 RNF17Q9BXT8 1623 aaKnown RBP25.06■■□□□ 1.6
SMPD3-211ENST00000568373 NBPF1Q3BBV0 1214 aa25.04■■□□□ 1.6
SMPD3-211ENST00000568373 EFCAB6Q5THR3 1501 aa25.03■■□□□ 1.6
SMPD3-211ENST00000568373 POLR3GLQ9BT43 218 aa25.03■■□□□ 1.6
SMPD3-211ENST00000568373 LMTK2Q8IWU2 1503 aa25.02■■□□□ 1.6
SMPD3-211ENST00000568373 FRMPD1Q5SYB0 1578 aa25.02■■□□□ 1.6
SMPD3-211ENST00000568373 MAP3K4Q9Y6R4 1608 aa25.02■■□□□ 1.6
SMPD3-211ENST00000568373 NEURL4Q96JN8 1562 aa25■■□□□ 1.59
SMPD3-211ENST00000568373 ABCA6Q8N139 1617 aa24.99■■□□□ 1.59
SMPD3-211ENST00000568373 MADDQ8WXG6 1647 aa24.99■■□□□ 1.59
SMPD3-211ENST00000568373 PPRC1Q5VV67 1664 aaKnown RBP24.99■■□□□ 1.59
SMPD3-211ENST00000568373 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
SMPD3-211ENST00000568373 DIP2BQ9P265 1576 aa24.98■■□□□ 1.59
SMPD3-211ENST00000568373 GLI2P10070 1586 aa24.97■■□□□ 1.59
SMPD3-211ENST00000568373 CCDC184Q52MB2 194 aa24.95■■□□□ 1.59
SMPD3-211ENST00000568373 RAPGEF3O95398 923 aa24.93■■□□□ 1.58
SMPD3-211ENST00000568373 RICTORQ6R327 1708 aa24.93■■□□□ 1.58
SMPD3-211ENST00000568373 TRHP20396 242 aaPredicted RBP24.92■■□□□ 1.58
SMPD3-211ENST00000568373 UGGT1Q9NYU2 1555 aa24.91■■□□□ 1.58
SMPD3-211ENST00000568373 MRS2Q9HD23 443 aa24.9■■□□□ 1.58
SMPD3-211ENST00000568373 KIF1BO60333 1816 aa24.9■■□□□ 1.58
SMPD3-211ENST00000568373 DIP2CQ9Y2E4 1556 aa24.9■■□□□ 1.58
SMPD3-211ENST00000568373 COL17A1Q9UMD9 1497 aaPredicted RBP24.89■■□□□ 1.58
SMPD3-211ENST00000568373 KIF13AQ9H1H9 1805 aa24.89■■□□□ 1.57
SMPD3-211ENST00000568373 HNRNPUQ00839 825 aaKnown RBP eCLIP24.89■■□□□ 1.57
SMPD3-211ENST00000568373 TESK2Q96S53 571 aa24.89■■□□□ 1.57
SMPD3-211ENST00000568373 TSPOAP1O95153 1857 aa24.88■■□□□ 1.57
SMPD3-211ENST00000568373 GGT6Q6P531 493 aa24.87■■□□□ 1.57
SMPD3-211ENST00000568373 IQGAP1P46940 1657 aa24.86■■□□□ 1.57
SMPD3-211ENST00000568373 NPATQ14207 1427 aa24.86■■□□□ 1.57
SMPD3-211ENST00000568373 ABCC3O15438 1527 aa24.85■■□□□ 1.57
SMPD3-211ENST00000568373 KIAA1210Q9ULL0 1709 aa24.84■■□□□ 1.57
SMPD3-211ENST00000568373 SUPT16HQ9Y5B9 1047 aaKnown RBP24.84■■□□□ 1.57
SMPD3-211ENST00000568373 MYOM2P54296 1465 aa24.84■■□□□ 1.57
SMPD3-211ENST00000568373 DISP3Q9P2K9 1392 aa24.83■■□□□ 1.57
SMPD3-211ENST00000568373 IFT172Q9UG01 1749 aa24.82■■□□□ 1.56
SMPD3-211ENST00000568373 MROH2AA6NES4 1674 aa24.82■■□□□ 1.56
SMPD3-211ENST00000568373 WASHC2CQ9Y4E1 1318 aa24.81■■□□□ 1.56
SMPD3-211ENST00000568373 FAM9BQ8IZU0 186 aa24.81■■□□□ 1.56
SMPD3-211ENST00000568373 SCAF11Q99590 1463 aaKnown RBP24.8■■□□□ 1.56
SMPD3-211ENST00000568373 TMF1P82094 1093 aa24.8■■□□□ 1.56
SMPD3-211ENST00000568373 ADGRB3O60242 1522 aa24.8■■□□□ 1.56
SMPD3-211ENST00000568373 KTN1Q86UP2 1357 aaKnown RBP24.8■■□□□ 1.56
SMPD3-211ENST00000568373 CAMSAP1Q5T5Y3 1602 aa24.8■■□□□ 1.56
SMPD3-211ENST00000568373 YEATS2Q9ULM3 1422 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms