RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 E9PSI1 815 aa13.33□□□□□ -0.28
FANCA-230ENST00000568369 MLECQ14165 292 aa13.33□□□□□ -0.28
FANCA-230ENST00000568369 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
FANCA-230ENST00000568369 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
FANCA-230ENST00000568369 MYOM3Q5VTT5 1437 aa13.32□□□□□ -0.28
FANCA-230ENST00000568369 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
FANCA-230ENST00000568369 CNTLNQ9NXG0 1405 aa13.3□□□□□ -0.28
FANCA-230ENST00000568369 HMMRO75330 724 aa13.3□□□□□ -0.28
FANCA-230ENST00000568369 SYAP1Q96A49 352 aaPredicted RBP13.3□□□□□ -0.28
FANCA-230ENST00000568369 KIAA2012Q0VF49 1180 aa13.3□□□□□ -0.28
FANCA-230ENST00000568369 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
FANCA-230ENST00000568369 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
FANCA-230ENST00000568369 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
FANCA-230ENST00000568369 GSE1Q14687 1217 aa13.29□□□□□ -0.28
FANCA-230ENST00000568369 STK31Q9BXU1 1019 aa13.29□□□□□ -0.28
FANCA-230ENST00000568369 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
FANCA-230ENST00000568369 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
FANCA-230ENST00000568369 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
FANCA-230ENST00000568369 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
FANCA-230ENST00000568369 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
FANCA-230ENST00000568369 CUX1P39880 1505 aa13.28□□□□□ -0.28
FANCA-230ENST00000568369 SLC4A3P48751 1232 aa13.28□□□□□ -0.28
FANCA-230ENST00000568369 DRC7Q8IY82 874 aa13.28□□□□□ -0.28
FANCA-230ENST00000568369 APAF1O14727 1248 aa13.28□□□□□ -0.28
FANCA-230ENST00000568369 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.29
FANCA-230ENST00000568369 ZKSCAN2Q63HK3 967 aa13.27□□□□□ -0.29
FANCA-230ENST00000568369 BCL2L13Q9BXK5 485 aa13.26□□□□□ -0.29
FANCA-230ENST00000568369 COG6Q9Y2V7 657 aa13.26□□□□□ -0.29
FANCA-230ENST00000568369 DDX11L8A8MPP1 907 aa13.26□□□□□ -0.29
FANCA-230ENST00000568369 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.26□□□□□ -0.29
FANCA-230ENST00000568369 WASHC2CQ9Y4E1 1318 aa13.26□□□□□ -0.29
FANCA-230ENST00000568369 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
FANCA-230ENST00000568369 ARAP1Q96P48 1450 aa13.25□□□□□ -0.29
FANCA-230ENST00000568369 ST18O60284 1047 aa13.24□□□□□ -0.29
FANCA-230ENST00000568369 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
FANCA-230ENST00000568369 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
FANCA-230ENST00000568369 TRIM6-TRIM34B2RNG4 842 aa13.23□□□□□ -0.29
FANCA-230ENST00000568369 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
FANCA-230ENST00000568369 HDAC5Q9UQL6 1122 aa13.23□□□□□ -0.29
FANCA-230ENST00000568369 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
FANCA-230ENST00000568369 SLC4A10Q6U841 1118 aa13.22□□□□□ -0.29
FANCA-230ENST00000568369 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
FANCA-230ENST00000568369 MIA2Q96PC5 1412 aa13.21□□□□□ -0.29
FANCA-230ENST00000568369 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
FANCA-230ENST00000568369 NCOA2Q15596 1464 aa13.21□□□□□ -0.29
FANCA-230ENST00000568369 PTPRGP23470 1445 aa13.21□□□□□ -0.29
FANCA-230ENST00000568369 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.3
FANCA-230ENST00000568369 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
FANCA-230ENST00000568369 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
FANCA-230ENST00000568369 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
FANCA-230ENST00000568369 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
FANCA-230ENST00000568369 ANKRD45Q5TZF3 282 aa13.2□□□□□ -0.3
FANCA-230ENST00000568369 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
FANCA-230ENST00000568369 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
FANCA-230ENST00000568369 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
FANCA-230ENST00000568369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.19□□□□□ -0.3
FANCA-230ENST00000568369 SKOR2Q2VWA4 1001 aaPredicted RBP13.19□□□□□ -0.3
FANCA-230ENST00000568369 CSPP1Q1MSJ5 1256 aa13.18□□□□□ -0.3
FANCA-230ENST00000568369 GPATCH3Q96I76 525 aa13.18□□□□□ -0.3
FANCA-230ENST00000568369 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
FANCA-230ENST00000568369 DDX49Q9Y6V7 483 aaKnown RBP13.18□□□□□ -0.3
FANCA-230ENST00000568369 ELL2O00472 640 aaPredicted RBP13.18□□□□□ -0.3
FANCA-230ENST00000568369 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
FANCA-230ENST00000568369 PHF14O94880 888 aa13.17□□□□□ -0.3
FANCA-230ENST00000568369 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
FANCA-230ENST00000568369 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
FANCA-230ENST00000568369 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
FANCA-230ENST00000568369 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
FANCA-230ENST00000568369 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
FANCA-230ENST00000568369 AAMPQ13685 434 aa13.16□□□□□ -0.3
FANCA-230ENST00000568369 NOL8Q76FK4 1167 aaKnown RBP13.16□□□□□ -0.3
FANCA-230ENST00000568369 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
FANCA-230ENST00000568369 RUNDC1Q96C34 613 aa13.15□□□□□ -0.3
FANCA-230ENST00000568369 AMPHP49418 695 aa13.14□□□□□ -0.31
FANCA-230ENST00000568369 NGDNQ8NEJ9 315 aaKnown RBP13.14□□□□□ -0.31
FANCA-230ENST00000568369 NPHP1O15259 732 aa13.14□□□□□ -0.31
FANCA-230ENST00000568369 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
FANCA-230ENST00000568369 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
FANCA-230ENST00000568369 NFKBIBQ15653 356 aa13.12□□□□□ -0.31
FANCA-230ENST00000568369 ADAMTS8Q9UP79 889 aa13.12□□□□□ -0.31
FANCA-230ENST00000568369 COG3Q96JB2 828 aa13.12□□□□□ -0.31
FANCA-230ENST00000568369 REC8O95072 547 aa13.11□□□□□ -0.31
FANCA-230ENST00000568369 ARID3AQ99856 593 aa13.11□□□□□ -0.31
FANCA-230ENST00000568369 API5Q9BZZ5 524 aaKnown RBP13.11□□□□□ -0.31
FANCA-230ENST00000568369 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
FANCA-230ENST00000568369 RIPK4P57078 832 aa13.11□□□□□ -0.31
FANCA-230ENST00000568369 FOXD4L5Q5VV16 416 aaPredicted RBP13.11□□□□□ -0.31
FANCA-230ENST00000568369 FOXD4L4Q8WXT5 416 aaPredicted RBP13.11□□□□□ -0.31
FANCA-230ENST00000568369 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
FANCA-230ENST00000568369 HSP90AA2PQ14568 343 aaPredicted RBP13.1□□□□□ -0.31
FANCA-230ENST00000568369 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
FANCA-230ENST00000568369 CFTRP13569 1480 aa13.1□□□□□ -0.31
FANCA-230ENST00000568369 CSB-PGBD3P0DP91 1061 aa13.1□□□□□ -0.31
FANCA-230ENST00000568369 TPM4P67936 248 aa13.1□□□□□ -0.31
FANCA-230ENST00000568369 RILPL2Q969X0 211 aa13.1□□□□□ -0.31
FANCA-230ENST00000568369 MINK1Q8N4C8 1332 aaPredicted RBP13.09□□□□□ -0.31
FANCA-230ENST00000568369 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
FANCA-230ENST00000568369 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
FANCA-230ENST00000568369 EID1Q9Y6B2 187 aa13.09□□□□□ -0.31
FANCA-230ENST00000568369 NBPF8Q3BBV2 869 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms