RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-209ENST00000566749 LMTK3Q96Q04 1460 aa37.77■■■■□ 3.64
PPP4C-209ENST00000566749 NCOA1Q15788 1441 aa37.74■■■■□ 3.63
PPP4C-209ENST00000566749 SETD1BQ9UPS6 1966 aaKnown RBP37.73■■■■□ 3.63
PPP4C-209ENST00000566749 RNF17Q9BXT8 1623 aaKnown RBP37.72■■■■□ 3.63
PPP4C-209ENST00000566749 WASHC2CQ9Y4E1 1318 aa37.72■■■■□ 3.63
PPP4C-209ENST00000566749 ERBINQ96RT1 1412 aa37.72■■■■□ 3.63
PPP4C-209ENST00000566749 PREX1Q8TCU6 1659 aa37.72■■■■□ 3.63
PPP4C-209ENST00000566749 ADGRL2O95490 1459 aa37.71■■■■□ 3.63
PPP4C-209ENST00000566749 KDM5DQ9BY66 1539 aa37.71■■■■□ 3.63
PPP4C-209ENST00000566749 FAM135AQ9P2D6 1515 aa37.7■■■■□ 3.63
PPP4C-209ENST00000566749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.69■■■■□ 3.621e-10■■□□□ 12.5
PPP4C-209ENST00000566749 PTPRKQ15262 1439 aa37.66■■■■□ 3.62
PPP4C-209ENST00000566749 ITGAEP38570 1179 aa37.65■■■■□ 3.62
PPP4C-209ENST00000566749 NPATQ14207 1427 aa37.64■■■■□ 3.62
PPP4C-209ENST00000566749 UHRF1BP1Q6BDS2 1440 aa37.64■■■■□ 3.62
PPP4C-209ENST00000566749 HSPA2P54652 639 aa37.63■■■■□ 3.61
PPP4C-209ENST00000566749 RRBP1Q9P2E9 1410 aaKnown RBP37.62■■■■□ 3.61
PPP4C-209ENST00000566749 MROH1Q8NDA8 1641 aa37.61■■■■□ 3.61
PPP4C-209ENST00000566749 ZC3H13Q5T200 1668 aaKnown RBP37.58■■■■□ 3.61
PPP4C-209ENST00000566749 ABCC3O15438 1527 aa37.57■■■■□ 3.6
PPP4C-209ENST00000566749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.55■■■■□ 3.6
PPP4C-209ENST00000566749 PRDM15P57071 1507 aaPredicted RBP37.54■■■■□ 3.6
PPP4C-209ENST00000566749 ROCK1Q13464 1354 aa37.54■■■■□ 3.6
PPP4C-209ENST00000566749 ANKRD50Q9ULJ7 1429 aa37.53■■■■□ 3.6
PPP4C-209ENST00000566749 PZPP20742 1482 aa37.53■■■■□ 3.6
PPP4C-209ENST00000566749 DEPDC5O75140 1603 aa37.53■■■■□ 3.6
PPP4C-209ENST00000566749 CEP152O94986 1710 aa37.52■■■■□ 3.6
PPP4C-209ENST00000566749 FBXO31Q5XUX0 539 aaPredicted RBP37.5■■■■□ 3.59
PPP4C-209ENST00000566749 KANK1Q14678 1352 aa37.49■■■■□ 3.59
PPP4C-209ENST00000566749 MYO3AQ8NEV4 1616 aa37.45■■■■□ 3.59
PPP4C-209ENST00000566749 CAMSAP1Q5T5Y3 1602 aa37.44■■■■□ 3.58
PPP4C-209ENST00000566749 TNRQ92752 1358 aa37.42■■■■□ 3.58
PPP4C-209ENST00000566749 CEP170BQ9Y4F5 1589 aaPredicted RBP37.37■■■■□ 3.57
PPP4C-209ENST00000566749 ZNF142P52746 1687 aaPredicted RBP37.37■■■■□ 3.57
PPP4C-209ENST00000566749 VWDEQ8N2E2 1590 aa37.36■■■■□ 3.57
PPP4C-209ENST00000566749 CFAP65Q6ZU64 1925 aaKnown RBP37.35■■■■□ 3.57
PPP4C-209ENST00000566749 ARHGAP31Q2M1Z3 1444 aa37.33■■■■□ 3.57
PPP4C-209ENST00000566749 LMTK2Q8IWU2 1503 aa37.33■■■■□ 3.57
PPP4C-209ENST00000566749 ERVK-7P63135 1459 aa37.32■■■■□ 3.56
PPP4C-209ENST00000566749 SPATA31D1Q6ZQQ2 1576 aa37.31■■■■□ 3.56
PPP4C-209ENST00000566749 A2ML1A8K2U0 1454 aa37.31■■■■□ 3.56
PPP4C-209ENST00000566749 UNC13BO14795 1591 aa37.28■■■■□ 3.56
PPP4C-209ENST00000566749 STRCQ7RTU9 1775 aa37.28■■■■□ 3.56
PPP4C-209ENST00000566749 NLRP1Q9C000 1473 aa37.26■■■■□ 3.56
PPP4C-209ENST00000566749 EFCAB6Q5THR3 1501 aa37.23■■■■□ 3.55
PPP4C-209ENST00000566749 DMRT2Q9Y5R5 561 aa37.2■■■■□ 3.55
PPP4C-209ENST00000566749 NAIPQ13075 1403 aa37.19■■■■□ 3.54
PPP4C-209ENST00000566749 GCC2Q8IWJ2 1684 aa37.18■■■■□ 3.54
PPP4C-209ENST00000566749 TET3O43151 1660 aa37.17■■■■□ 3.54
PPP4C-209ENST00000566749 NUP155O75694 1391 aa37.17■■■■□ 3.54
PPP4C-209ENST00000566749 PLA2R1Q13018 1463 aa37.17■■■■□ 3.54
PPP4C-209ENST00000566749 UGGT1Q9NYU2 1555 aa37.16■■■■□ 3.54
PPP4C-209ENST00000566749 IQGAP3Q86VI3 1631 aa37.14■■■■□ 3.54
PPP4C-209ENST00000566749 HFM1A2PYH4 1435 aa37.14■■■■□ 3.54
PPP4C-209ENST00000566749 THEMISQ8N1K5 641 aaPredicted RBP37.13■■■■□ 3.54
PPP4C-209ENST00000566749 NCKAP5LQ9HCH0 1330 aa37.12■■■■□ 3.53
PPP4C-209ENST00000566749 RPRD2Q5VT52 1461 aaKnown RBP37.11■■■■□ 3.53
PPP4C-209ENST00000566749 PKD2Q13563 968 aa37.1■■■■□ 3.53
PPP4C-209ENST00000566749 PTPRTO14522 1441 aa37.09■■■■□ 3.53
PPP4C-209ENST00000566749 NOS1P29475 1434 aa37.06■■■■□ 3.52
PPP4C-209ENST00000566749 SYNMO15061 1565 aa37.04■■■■□ 3.52
PPP4C-209ENST00000566749 UBR1Q8IWV7 1749 aa37.02■■■■□ 3.52
PPP4C-209ENST00000566749 E9PCH4 1651 aa37.02■■■■□ 3.52
PPP4C-209ENST00000566749 PIK3C2BO00750 1634 aa37■■■■□ 3.51
PPP4C-209ENST00000566749 IDI1Q13907 227 aa37■■■■□ 3.51
PPP4C-209ENST00000566749 ANKLE2Q86XL3 938 aa37■■■■□ 3.51
PPP4C-209ENST00000566749 STAG3Q9UJ98 1225 aa36.99■■■■□ 3.51
PPP4C-209ENST00000566749 POLR1AO95602 1720 aaPredicted RBP36.99■■■■□ 3.51
PPP4C-209ENST00000566749 SLC52A1Q9NWF4 448 aa36.97■■■■□ 3.51
PPP4C-209ENST00000566749 TRIM52Q96A61 297 aa36.96■■■■□ 3.51
PPP4C-209ENST00000566749 NEURL4Q96JN8 1562 aa36.91■■■■□ 3.5
PPP4C-209ENST00000566749 KDM5AP29375 1690 aaKnown RBP36.89■■■■□ 3.5
PPP4C-209ENST00000566749 ADGRB3O60242 1522 aa36.85■■■■□ 3.49
PPP4C-209ENST00000566749 SLIT1O75093 1534 aa36.85■■■■□ 3.49
PPP4C-209ENST00000566749 ARHGAP23Q9P227 1491 aa36.84■■■■□ 3.49
PPP4C-209ENST00000566749 TMEM2Q9UHN6 1383 aa36.82■■■■□ 3.49
PPP4C-209ENST00000566749 NPHP4O75161 1426 aaPredicted RBP36.82■■■■□ 3.49
PPP4C-209ENST00000566749 MED14O60244 1454 aa36.82■■■■□ 3.49
PPP4C-209ENST00000566749 TXNDC2Q86VQ3 553 aa36.82■■■■□ 3.48
PPP4C-209ENST00000566749 EID1Q9Y6B2 187 aa36.82■■■■□ 3.48
PPP4C-209ENST00000566749 SCAF11Q99590 1463 aaKnown RBP36.81■■■■□ 3.48
PPP4C-209ENST00000566749 SETD5Q9C0A6 1442 aa36.8■■■■□ 3.48
PPP4C-209ENST00000566749 SLC4A1APQ9BWU0 796 aaKnown RBP36.8■■■■□ 3.48
PPP4C-209ENST00000566749 SPHKAPQ2M3C7 1700 aa36.79■■■■□ 3.48
PPP4C-209ENST00000566749 LTKP29376 864 aa36.79■■■■□ 3.48
PPP4C-209ENST00000566749 CERKQ8TCT0 537 aa36.78■■■■□ 3.48
PPP4C-209ENST00000566749 IQGAP1P46940 1657 aa36.77■■■■□ 3.48
PPP4C-209ENST00000566749 CHGAP10645 457 aaKnown RBP36.77■■■■□ 3.48
PPP4C-209ENST00000566749 ZNF335Q9H4Z2 1342 aaPredicted RBP36.76■■■■□ 3.47
PPP4C-209ENST00000566749 MYO5BQ9ULV0 1848 aa36.75■■■■□ 3.47
PPP4C-209ENST00000566749 TMEM131LA2VDJ0 1609 aa36.74■■■■□ 3.47
PPP4C-209ENST00000566749 LTBP4Q8N2S1 1624 aa36.73■■■■□ 3.47
PPP4C-209ENST00000566749 ACIN1Q9UKV3 1341 aaKnown RBP36.7■■■■□ 3.47
PPP4C-209ENST00000566749 RAB3GAP2Q9H2M9 1393 aa36.67■■■■□ 3.46
PPP4C-209ENST00000566749 TRPM2O94759 1503 aa36.66■■■■□ 3.46
PPP4C-209ENST00000566749 MPHOSPH9Q99550 1183 aa36.64■■■■□ 3.46
PPP4C-209ENST00000566749 HDGFP51858 240 aaKnown RBP36.63■■■■□ 3.45
PPP4C-209ENST00000566749 ILDR1Q86SU0 546 aaPredicted RBP36.63■■■■□ 3.45
PPP4C-209ENST00000566749 RIMS2Q9UQ26 1411 aa36.63■■■■□ 3.45
PPP4C-209ENST00000566749 FBXO41Q8TF61 875 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms