RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.59
RNF40-207ENST00000565931 RNF17Q9BXT8 1623 aaKnown RBP24.95■■□□□ 1.58
RNF40-207ENST00000565931 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.58
RNF40-207ENST00000565931 WASHC2CQ9Y4E1 1318 aa24.93■■□□□ 1.58
RNF40-207ENST00000565931 GCC2Q8IWJ2 1684 aa24.93■■□□□ 1.58
RNF40-207ENST00000565931 MROH1Q8NDA8 1641 aa24.93■■□□□ 1.58
RNF40-207ENST00000565931 CNTLNQ9NXG0 1405 aa24.91■■□□□ 1.58
RNF40-207ENST00000565931 MADDQ8WXG6 1647 aa24.9■■□□□ 1.58
RNF40-207ENST00000565931 PRDM15P57071 1507 aaPredicted RBP24.9■■□□□ 1.58
RNF40-207ENST00000565931 KANK1Q14678 1352 aa24.9■■□□□ 1.58
RNF40-207ENST00000565931 DEPDC5O75140 1603 aa24.89■■□□□ 1.57
RNF40-207ENST00000565931 KDM5DQ9BY66 1539 aa24.88■■□□□ 1.57
RNF40-207ENST00000565931 FAM135AQ9P2D6 1515 aa24.88■■□□□ 1.57
RNF40-207ENST00000565931 RAB3GAP2Q9H2M9 1393 aa24.88■■□□□ 1.57
RNF40-207ENST00000565931 NUP155O75694 1391 aa24.87■■□□□ 1.57
RNF40-207ENST00000565931 ZMYM3Q14202 1370 aa24.86■■□□□ 1.57
RNF40-207ENST00000565931 ABCC3O15438 1527 aa24.86■■□□□ 1.57
RNF40-207ENST00000565931 UNC13BO14795 1591 aa24.85■■□□□ 1.57
RNF40-207ENST00000565931 VWDEQ8N2E2 1590 aa24.85■■□□□ 1.57
RNF40-207ENST00000565931 PTPRMP28827 1452 aa24.85■■□□□ 1.57
RNF40-207ENST00000565931 HRCP23327 699 aa24.85■■□□□ 1.57
RNF40-207ENST00000565931 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
RNF40-207ENST00000565931 CEBPAP49715 358 aaPredicted RBP24.83■■□□□ 1.57
RNF40-207ENST00000565931 FER1L4A9Z1Z3 1794 aa24.82■■□□□ 1.56
RNF40-207ENST00000565931 ACIN1Q9UKV3 1341 aaKnown RBP24.82■■□□□ 1.56
RNF40-207ENST00000565931 LMTK2Q8IWU2 1503 aa24.81■■□□□ 1.56
RNF40-207ENST00000565931 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
RNF40-207ENST00000565931 PLPPR3Q6T4P5 718 aa24.79■■□□□ 1.56
RNF40-207ENST00000565931 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
RNF40-207ENST00000565931 CLTCQ00610 1675 aaKnown RBP24.78■■□□□ 1.56
RNF40-207ENST00000565931 ARHGAP31Q2M1Z3 1444 aa24.77■■□□□ 1.56
RNF40-207ENST00000565931 ZC3H13Q5T200 1668 aaKnown RBP24.76■■□□□ 1.55
RNF40-207ENST00000565931 IQGAP3Q86VI3 1631 aa24.75■■□□□ 1.55
RNF40-207ENST00000565931 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
RNF40-207ENST00000565931 FBXO31Q5XUX0 539 aaPredicted RBP24.74■■□□□ 1.55
RNF40-207ENST00000565931 PZPP20742 1482 aa24.74■■□□□ 1.55
RNF40-207ENST00000565931 NPATQ14207 1427 aa24.73■■□□□ 1.55
RNF40-207ENST00000565931 CEP152O94986 1710 aa24.72■■□□□ 1.55
RNF40-207ENST00000565931 SLC4A1APQ9BWU0 796 aaKnown RBP24.72■■□□□ 1.55
RNF40-207ENST00000565931 MPHOSPH9Q99550 1183 aa24.71■■□□□ 1.55
RNF40-207ENST00000565931 CAMSAP1Q5T5Y3 1602 aa24.7■■□□□ 1.54
RNF40-207ENST00000565931 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
RNF40-207ENST00000565931 C3P01024 1663 aa24.69■■□□□ 1.54
RNF40-207ENST00000565931 PKD2Q13563 968 aa24.68■■□□□ 1.54
RNF40-207ENST00000565931 TET3O43151 1660 aa24.68■■□□□ 1.54
RNF40-207ENST00000565931 RPRD2Q5VT52 1461 aaKnown RBP24.66■■□□□ 1.54
RNF40-207ENST00000565931 ERVK-7P63135 1459 aa24.65■■□□□ 1.54
RNF40-207ENST00000565931 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
RNF40-207ENST00000565931 TNRQ92752 1358 aa24.64■■□□□ 1.53
RNF40-207ENST00000565931 NOS1P29475 1434 aa24.63■■□□□ 1.53
RNF40-207ENST00000565931 SPATA31D1Q6ZQQ2 1576 aa24.62■■□□□ 1.53
RNF40-207ENST00000565931 FOXD1Q16676 465 aa24.59■■□□□ 1.53
RNF40-207ENST00000565931 E9PCH4 1651 aa24.59■■□□□ 1.53
RNF40-207ENST00000565931 PTPRTO14522 1441 aa24.57■■□□□ 1.52
RNF40-207ENST00000565931 PREX1Q8TCU6 1659 aa24.55■■□□□ 1.52
RNF40-207ENST00000565931 PLA2R1Q13018 1463 aa24.54■■□□□ 1.52
RNF40-207ENST00000565931 SLC52A1Q9NWF4 448 aa24.54■■□□□ 1.52
RNF40-207ENST00000565931 UHRF1BP1Q6BDS2 1440 aa24.53■■□□□ 1.52
RNF40-207ENST00000565931 IDI1Q13907 227 aa24.53■■□□□ 1.52
RNF40-207ENST00000565931 NLRP1Q9C000 1473 aa24.51■■□□□ 1.51
RNF40-207ENST00000565931 SYNMO15061 1565 aa24.51■■□□□ 1.51
RNF40-207ENST00000565931 A2ML1A8K2U0 1454 aa24.48■■□□□ 1.51
RNF40-207ENST00000565931 DHX57Q6P158 1386 aaKnown RBP24.48■■□□□ 1.51
RNF40-207ENST00000565931 SETD1BQ9UPS6 1966 aaKnown RBP24.47■■□□□ 1.51
RNF40-207ENST00000565931 LMTK3Q96Q04 1460 aa24.46■■□□□ 1.51
RNF40-207ENST00000565931 ANKRD30BQ9BXX2 1392 aa24.46■■□□□ 1.51
RNF40-207ENST00000565931 MYO3AQ8NEV4 1616 aa24.46■■□□□ 1.51
RNF40-207ENST00000565931 TRPM2O94759 1503 aa24.45■■□□□ 1.51
RNF40-207ENST00000565931 UGGT1Q9NYU2 1555 aa24.45■■□□□ 1.5
RNF40-207ENST00000565931 CFAP65Q6ZU64 1925 aaKnown RBP24.45■■□□□ 1.5
RNF40-207ENST00000565931 CEP170BQ9Y4F5 1589 aaPredicted RBP24.42■■□□□ 1.5
RNF40-207ENST00000565931 SPHKAPQ2M3C7 1700 aa24.42■■□□□ 1.5
RNF40-207ENST00000565931 HSPA2P54652 639 aa24.41■■□□□ 1.5
RNF40-207ENST00000565931 STAG3Q9UJ98 1225 aa24.41■■□□□ 1.5
RNF40-207ENST00000565931 PIK3C2BO00750 1634 aa24.4■■□□□ 1.5
RNF40-207ENST00000565931 THEMISQ8N1K5 641 aaPredicted RBP24.4■■□□□ 1.5
RNF40-207ENST00000565931 CCDC144AA2RUR9 1427 aa24.39■■□□□ 1.5
RNF40-207ENST00000565931 CHGAP10645 457 aaKnown RBP24.39■■□□□ 1.49
RNF40-207ENST00000565931 ZNF142P52746 1687 aaPredicted RBP24.37■■□□□ 1.49
RNF40-207ENST00000565931 CLTCL1P53675 1640 aa24.36■■□□□ 1.49
RNF40-207ENST00000565931 ADGRB3O60242 1522 aa24.35■■□□□ 1.49
RNF40-207ENST00000565931 TMEM2Q9UHN6 1383 aa24.31■■□□□ 1.48
RNF40-207ENST00000565931 TMEM131LA2VDJ0 1609 aa24.31■■□□□ 1.48
RNF40-207ENST00000565931 UBR1Q8IWV7 1749 aa24.3■■□□□ 1.48
RNF40-207ENST00000565931 SPATA31E1Q6ZUB1 1445 aa24.28■■□□□ 1.48
RNF40-207ENST00000565931 KDM5AP29375 1690 aaKnown RBP24.28■■□□□ 1.48
RNF40-207ENST00000565931 ARHGAP23Q9P227 1491 aa24.28■■□□□ 1.48
RNF40-207ENST00000565931 SIN3AQ96ST3 1273 aa24.28■■□□□ 1.48
RNF40-207ENST00000565931 SLIT1O75093 1534 aa24.27■■□□□ 1.48
RNF40-207ENST00000565931 ZNF326Q5BKZ1 582 aaKnown RBP24.27■■□□□ 1.48
RNF40-207ENST00000565931 ANKLE2Q86XL3 938 aa24.27■■□□□ 1.48
RNF40-207ENST00000565931 LTKP29376 864 aa24.26■■□□□ 1.47
RNF40-207ENST00000565931 RGL3Q3MIN7 710 aa24.26■■□□□ 1.47
RNF40-207ENST00000565931 TXNDC2Q86VQ3 553 aa24.26■■□□□ 1.47
RNF40-207ENST00000565931 NCKAP5LQ9HCH0 1330 aa24.25■■□□□ 1.47
RNF40-207ENST00000565931 RIMS2Q9UQ26 1411 aa24.25■■□□□ 1.47
RNF40-207ENST00000565931 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
RNF40-207ENST00000565931 EID1Q9Y6B2 187 aa24.24■■□□□ 1.47
RNF40-207ENST00000565931 ZFYVE9O95405 1425 aa24.24■■□□□ 1.47
RNF40-207ENST00000565931 RPGRIP1LQ68CZ1 1315 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms