RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 PREX2Q70Z35 1606 aa14.86□□□□□ -0.03
VPS9D1-205ENST00000565452 PLEKHH2Q8IVE3 1493 aa14.85□□□□□ -0.03
VPS9D1-205ENST00000565452 ATP7AQ04656 1500 aa14.85□□□□□ -0.03
VPS9D1-205ENST00000565452 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
VPS9D1-205ENST00000565452 NEURL4Q96JN8 1562 aa14.85□□□□□ -0.03
VPS9D1-205ENST00000565452 DHX29Q7Z478 1369 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-205ENST00000565452 GPATCH8Q9UKJ3 1502 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-205ENST00000565452 FAM135BQ49AJ0 1406 aa14.83□□□□□ -0.04
VPS9D1-205ENST00000565452 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
VPS9D1-205ENST00000565452 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
VPS9D1-205ENST00000565452 SYCP2Q9BX26 1530 aa14.82□□□□□ -0.04
VPS9D1-205ENST00000565452 PLXNC1O60486 1568 aa14.81□□□□□ -0.04
VPS9D1-205ENST00000565452 UPF1Q92900 1129 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS9D1-205ENST00000565452 CCNB3Q8WWL7 1395 aa14.81□□□□□ -0.04
VPS9D1-205ENST00000565452 CASKIN1Q8WXD9 1431 aa14.8□□□□□ -0.04
VPS9D1-205ENST00000565452 PZPP20742 1482 aa14.8□□□□□ -0.04
VPS9D1-205ENST00000565452 UGGT1Q9NYU2 1555 aa14.8□□□□□ -0.04
VPS9D1-205ENST00000565452 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-205ENST00000565452 TXNDC2Q86VQ3 553 aa14.78□□□□□ -0.04
VPS9D1-205ENST00000565452 RTEL1-TNFRSF6BF6WH68 1400 aa14.77□□□□□ -0.04
VPS9D1-205ENST00000565452 ZNF644Q9H582 1327 aaPredicted RBP14.77□□□□□ -0.04
VPS9D1-205ENST00000565452 DEPDC5O75140 1603 aa14.77□□□□□ -0.05
VPS9D1-205ENST00000565452 RSPH4AQ5TD94 716 aa14.76□□□□□ -0.05
VPS9D1-205ENST00000565452 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
VPS9D1-205ENST00000565452 EID1Q9Y6B2 187 aa14.76□□□□□ -0.05
VPS9D1-205ENST00000565452 RNF17Q9BXT8 1623 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-205ENST00000565452 ZNF772Q68DY9 489 aaPredicted RBP14.74□□□□□ -0.05
VPS9D1-205ENST00000565452 CDC42BPAQ5VT25 1732 aa14.74□□□□□ -0.05
VPS9D1-205ENST00000565452 INO80Q9ULG1 1556 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-205ENST00000565452 LTKP29376 864 aa14.72□□□□□ -0.05
VPS9D1-205ENST00000565452 PROSER2Q86WR7 435 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-205ENST00000565452 KDM5DQ9BY66 1539 aa14.71□□□□□ -0.05
VPS9D1-205ENST00000565452 TRIM52Q96A61 297 aa14.71□□□□□ -0.05
VPS9D1-205ENST00000565452 IQGAP1P46940 1657 aa14.71□□□□□ -0.06
VPS9D1-205ENST00000565452 TSPY4P0CV99 314 aa14.7□□□□□ -0.06
VPS9D1-205ENST00000565452 TSPY10P0CW01 314 aa14.7□□□□□ -0.06
VPS9D1-205ENST00000565452 KCNA6P17658 529 aa14.7□□□□□ -0.06
VPS9D1-205ENST00000565452 MEX3CQ5U5Q3 659 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-205ENST00000565452 ADGBQ8N7X0 1667 aa14.7□□□□□ -0.06
VPS9D1-205ENST00000565452 SYNMO15061 1565 aa14.69□□□□□ -0.06
VPS9D1-205ENST00000565452 RXRBP28702 533 aa14.69□□□□□ -0.06
VPS9D1-205ENST00000565452 SLAIN2Q9P270 581 aa14.69□□□□□ -0.06
VPS9D1-205ENST00000565452 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
VPS9D1-205ENST00000565452 JCADQ9P266 1359 aa14.69□□□□□ -0.06
VPS9D1-205ENST00000565452 MBD5Q9P267 1494 aa14.69□□□□□ -0.06
VPS9D1-205ENST00000565452 LRRIQ1Q96JM4 1722 aa14.68□□□□□ -0.06
VPS9D1-205ENST00000565452 MTUS2Q5JR59 1369 aa14.68□□□□□ -0.06
VPS9D1-205ENST00000565452 SCAF11Q99590 1463 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-205ENST00000565452 STRCP1A6NGW2 1772 aa14.67□□□□□ -0.06
VPS9D1-205ENST00000565452 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
VPS9D1-205ENST00000565452 FYCO1Q9BQS8 1478 aa14.64□□□□□ -0.07
VPS9D1-205ENST00000565452 RBM33Q96EV2 1170 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-205ENST00000565452 SPATA31A6Q5VVP1 1343 aa14.64□□□□□ -0.07
VPS9D1-205ENST00000565452 FOXD1Q16676 465 aa14.63□□□□□ -0.07
VPS9D1-205ENST00000565452 MSH6P52701 1360 aa14.6□□□□□ -0.07
VPS9D1-205ENST00000565452 SLC26A8Q96RN1 970 aa14.6□□□□□ -0.07
VPS9D1-205ENST00000565452 LRRC9Q6ZRR7 1453 aa14.6□□□□□ -0.07
VPS9D1-205ENST00000565452 BCANQ96GW7 911 aa14.59□□□□□ -0.07
VPS9D1-205ENST00000565452 ERVK-7P63135 1459 aa14.58□□□□□ -0.08
VPS9D1-205ENST00000565452 CCDC141Q6ZP82 1450 aa14.57□□□□□ -0.08
VPS9D1-205ENST00000565452 ARHGAP23Q9P227 1491 aa14.57□□□□□ -0.08
VPS9D1-205ENST00000565452 SRCAPQ6ZRS2 3230 aa14.57□□□□□ -0.08
VPS9D1-205ENST00000565452 SETD1AO15047 1707 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-205ENST00000565452 TMEM2Q9UHN6 1383 aa14.57□□□□□ -0.08
VPS9D1-205ENST00000565452 NCOA2Q15596 1464 aa14.57□□□□□ -0.08
VPS9D1-205ENST00000565452 SLIT1O75093 1534 aa14.56□□□□□ -0.08
VPS9D1-205ENST00000565452 ZC3H13Q5T200 1668 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-205ENST00000565452 ROBO1Q9Y6N7 1651 aa14.55□□□□□ -0.08
VPS9D1-205ENST00000565452 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
VPS9D1-205ENST00000565452 FGD6Q6ZV73 1430 aa14.54□□□□□ -0.08
VPS9D1-205ENST00000565452 ABCC3O15438 1527 aa14.53□□□□□ -0.08
VPS9D1-205ENST00000565452 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-205ENST00000565452 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-205ENST00000565452 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-205ENST00000565452 IDI1Q13907 227 aa14.52□□□□□ -0.09
VPS9D1-205ENST00000565452 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.09
VPS9D1-205ENST00000565452 C14orf37Q86TY3 774 aa14.52□□□□□ -0.09
VPS9D1-205ENST00000565452 QTRT2Q9H974 415 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-205ENST00000565452 CDK12Q9NYV4 1490 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-205ENST00000565452 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
VPS9D1-205ENST00000565452 XIRP1Q702N8 1843 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-205ENST00000565452 HDGFP51858 240 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-205ENST00000565452 RBM6P78332 1123 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-205ENST00000565452 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-205ENST00000565452 ATF3P18847 181 aa14.5□□□□□ -0.09
VPS9D1-205ENST00000565452 CADPS2Q86UW7 1296 aa14.5□□□□□ -0.09
VPS9D1-205ENST00000565452 AFF2P51816 1311 aa14.49□□□□□ -0.09
VPS9D1-205ENST00000565452 C19orf44Q9H6X5 657 aa14.49□□□□□ -0.09
VPS9D1-205ENST00000565452 UBR1Q8IWV7 1749 aa14.49□□□□□ -0.09
VPS9D1-205ENST00000565452 ARHGAP31Q2M1Z3 1444 aa14.49□□□□□ -0.09
VPS9D1-205ENST00000565452 TIAM1Q13009 1591 aa14.48□□□□□ -0.09
VPS9D1-205ENST00000565452 MAP3K1Q13233 1512 aa14.48□□□□□ -0.09
VPS9D1-205ENST00000565452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.092e-9■■■■■ 29.7
VPS9D1-205ENST00000565452 PHLPP1O60346 1717 aa14.48□□□□□ -0.09
VPS9D1-205ENST00000565452 LRP6O75581 1613 aa14.48□□□□□ -0.09
VPS9D1-205ENST00000565452 CAMSAP2Q08AD1 1489 aa14.47□□□□□ -0.09
VPS9D1-205ENST00000565452 NGLY1Q96IV0 654 aa14.47□□□□□ -0.09
VPS9D1-205ENST00000565452 NKTRP30414 1462 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-205ENST00000565452 NCOA3Q9Y6Q9 1424 aa14.46□□□□□ -0.09
VPS9D1-205ENST00000565452 C8orf37Q96NL8 207 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms