RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CCDC18Q5T9S5 1454 aa4.57□□□□□ -1.68
CHD9-213ENST00000564845 TMEM132EQ6IEE7 984 aa4.57□□□□□ -1.68
CHD9-213ENST00000564845 STK26Q9P289 416 aa4.57□□□□□ -1.68
CHD9-213ENST00000564845 PLEKHD1A6NEE1 506 aa4.57□□□□□ -1.68
CHD9-213ENST00000564845 B4GALNT3Q6L9W6 998 aa4.56□□□□□ -1.68
CHD9-213ENST00000564845 DAPK1P53355 1430 aa4.56□□□□□ -1.68
CHD9-213ENST00000564845 TROQ12816 1431 aaPredicted RBP4.56□□□□□ -1.68
CHD9-213ENST00000564845 SAMD9LQ8IVG5 1584 aa4.56□□□□□ -1.68
CHD9-213ENST00000564845 RAPGEF6Q8TEU7 1601 aa4.56□□□□□ -1.68
CHD9-213ENST00000564845 ST20-MTHFSA0A0A6YYL1 179 aa4.56□□□□□ -1.68
CHD9-213ENST00000564845 UHRF1BP1Q6BDS2 1440 aa4.56□□□□□ -1.68
CHD9-213ENST00000564845 CROCC2H7BZ55 1655 aa4.55□□□□□ -1.68
CHD9-213ENST00000564845 ANP32CO43423 234 aa4.55□□□□□ -1.68
CHD9-213ENST00000564845 CARD11Q9BXL7 1154 aa4.55□□□□□ -1.68
CHD9-213ENST00000564845 CDC42BPBQ9Y5S2 1711 aa4.55□□□□□ -1.68
CHD9-213ENST00000564845 CCDC146Q8IYE0 955 aa4.55□□□□□ -1.68
CHD9-213ENST00000564845 NUP155O75694 1391 aa4.55□□□□□ -1.68
CHD9-213ENST00000564845 MRS2Q9HD23 443 aa4.55□□□□□ -1.68
CHD9-213ENST00000564845 TIMELESSQ9UNS1 1208 aa4.54□□□□□ -1.68
CHD9-213ENST00000564845 KIF3BO15066 747 aa4.54□□□□□ -1.68
CHD9-213ENST00000564845 TTC37Q6PGP7 1564 aa4.54□□□□□ -1.68
CHD9-213ENST00000564845 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.54□□□□□ -1.682e-6■■■□□ 15.9
CHD9-213ENST00000564845 CHMP4AQ9BY43 222 aa4.54□□□□□ -1.68
CHD9-213ENST00000564845 GPRASP1Q5JY77 1395 aa4.54□□□□□ -1.68
CHD9-213ENST00000564845 VCANP13611 3396 aa4.53□□□□□ -1.68
CHD9-213ENST00000564845 DAXXQ9UER7 740 aaPredicted RBP4.53□□□□□ -1.68
CHD9-213ENST00000564845 SHANK2Q9UPX8 1470 aa4.53□□□□□ -1.68
CHD9-213ENST00000564845 NCKAP5LQ9HCH0 1330 aa4.53□□□□□ -1.68
CHD9-213ENST00000564845 PER1O15534 1290 aaPredicted RBP4.53□□□□□ -1.68
CHD9-213ENST00000564845 CFAP44Q96MT7 982 aa4.53□□□□□ -1.68
CHD9-213ENST00000564845 CDCA7LQ96GN5 454 aa4.53□□□□□ -1.68
CHD9-213ENST00000564845 TSPY4P0CV99 314 aa4.52□□□□□ -1.69
CHD9-213ENST00000564845 TSPY10P0CW01 314 aa4.52□□□□□ -1.69
CHD9-213ENST00000564845 ABCC2Q92887 1545 aa4.52□□□□□ -1.69
CHD9-213ENST00000564845 E9PCH4 1651 aa4.52□□□□□ -1.69
CHD9-213ENST00000564845 FRMPD1Q5SYB0 1578 aa4.52□□□□□ -1.69
CHD9-213ENST00000564845 A0A0U1RQG5 324 aaPredicted RBP4.52□□□□□ -1.69
CHD9-213ENST00000564845 PPM1GO15355 546 aaPredicted RBP4.52□□□□□ -1.69
CHD9-213ENST00000564845 MAST1Q9Y2H9 1570 aa4.52□□□□□ -1.69
CHD9-213ENST00000564845 DEPDC5O75140 1603 aa4.52□□□□□ -1.69
CHD9-213ENST00000564845 RRP7AQ9Y3A4 280 aaKnown RBP4.52□□□□□ -1.69
CHD9-213ENST00000564845 ARHGEF5Q12774 1597 aa4.52□□□□□ -1.69
CHD9-213ENST00000564845 TRAK1Q9UPV9 953 aa4.51□□□□□ -1.69
CHD9-213ENST00000564845 KDM5CP41229 1560 aa4.51□□□□□ -1.69
CHD9-213ENST00000564845 TMC1Q8TDI8 760 aa4.51□□□□□ -1.69
CHD9-213ENST00000564845 NPM2Q86SE8 214 aaKnown RBP4.51□□□□□ -1.69
CHD9-213ENST00000564845 EIF4G2P78344 907 aaKnown RBP eCLIP4.51□□□□□ -1.69
CHD9-213ENST00000564845 CAMSAP2Q08AD1 1489 aa4.51□□□□□ -1.69
CHD9-213ENST00000564845 CEBPAP49715 358 aaPredicted RBP4.51□□□□□ -1.69
CHD9-213ENST00000564845 UNC13BO14795 1591 aa4.51□□□□□ -1.69
CHD9-213ENST00000564845 ERICH6Q7L0X2 663 aa4.5□□□□□ -1.69
CHD9-213ENST00000564845 FBXO31Q5XUX0 539 aaPredicted RBP4.5□□□□□ -1.69
CHD9-213ENST00000564845 CFAP65Q6ZU64 1925 aaKnown RBP4.5□□□□□ -1.69
CHD9-213ENST00000564845 PREX2Q70Z35 1606 aa4.5□□□□□ -1.69
CHD9-213ENST00000564845 HMGB3O15347 200 aaKnown RBP4.5□□□□□ -1.69
CHD9-213ENST00000564845 KIF7Q2M1P5 1343 aa4.5□□□□□ -1.69
CHD9-213ENST00000564845 TRHP20396 242 aaPredicted RBP4.5□□□□□ -1.69
CHD9-213ENST00000564845 ZBTB7CA1YPR0 619 aa4.5□□□□□ -1.69
CHD9-213ENST00000564845 ARAP3Q8WWN8 1544 aa4.5□□□□□ -1.69
CHD9-213ENST00000564845 CFAP70Q5T0N1 1121 aa4.5□□□□□ -1.69
CHD9-213ENST00000564845 XIRP2A4UGR9 3374 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 BCL2L13Q9BXK5 485 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 RNF123Q5XPI4 1314 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 UHRF1BP1LA0JNW5 1464 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 PLXNC1O60486 1568 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 TESK2Q96S53 571 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 TCERG1O14776 1098 aaKnown RBP4.49□□□□□ -1.69
CHD9-213ENST00000564845 HAP1P54257 671 aaPredicted RBP4.49□□□□□ -1.69
CHD9-213ENST00000564845 ANP32EQ9BTT0 268 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 UGGT1Q9NYU2 1555 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 SIGLEC1Q9BZZ2 1709 aa4.49□□□□□ -1.69
CHD9-213ENST00000564845 CHMP4BQ9H444 224 aaKnown RBP4.49□□□□□ -1.69
CHD9-213ENST00000564845 PTPRTO14522 1441 aa4.48□□□□□ -1.69
CHD9-213ENST00000564845 LRPPRCP42704 1394 aaKnown RBP4.48□□□□□ -1.69
CHD9-213ENST00000564845 SCAPERQ9BY12 1400 aa4.48□□□□□ -1.69
CHD9-213ENST00000564845 NRXN1Q9ULB1 1477 aa4.48□□□□□ -1.69
CHD9-213ENST00000564845 NUTM2GQ5VZR2 741 aa4.48□□□□□ -1.69
CHD9-213ENST00000564845 NEURL4Q96JN8 1562 aa4.48□□□□□ -1.69
CHD9-213ENST00000564845 KIAA1107Q9UPP5 1409 aa4.48□□□□□ -1.69
CHD9-213ENST00000564845 WDR7Q9Y4E6 1490 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 POLR1AO95602 1720 aaPredicted RBP4.47□□□□□ -1.69
CHD9-213ENST00000564845 PRDM15P57071 1507 aaPredicted RBP4.47□□□□□ -1.69
CHD9-213ENST00000564845 RNF17Q9BXT8 1623 aaKnown RBP4.47□□□□□ -1.69
CHD9-213ENST00000564845 INO80Q9ULG1 1556 aaPredicted RBP4.47□□□□□ -1.69
CHD9-213ENST00000564845 PLEKHH2Q8IVE3 1493 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 TSHZ2Q9NRE2 1034 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 MYO15AQ9UKN7 3530 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 MKI67P46013 3256 aaKnown RBP4.47□□□□□ -1.69
CHD9-213ENST00000564845 ABCC1P33527 1531 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 DUOX2Q9NRD8 1548 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 ABCA9Q8IUA7 1624 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 PANK3Q9H999 370 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 NBR1Q14596 966 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 A2MP01023 1474 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 ARHGAP5Q13017 1502 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 ROCK2O75116 1388 aaKnown RBP4.47□□□□□ -1.69
CHD9-213ENST00000564845 ADGRB1O14514 1584 aa4.47□□□□□ -1.69
CHD9-213ENST00000564845 TRAPPC8Q9Y2L5 1435 aa4.46□□□□□ -1.69
CHD9-213ENST00000564845 C20orf194Q5TEA3 1177 aa4.46□□□□□ -1.69
CHD9-213ENST00000564845 TNNQ9UQP3 1299 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms