RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 ST20-MTHFSA0A0A6YYL1 179 aa30.58■■■□□ 2.49
SPSB3-206ENST00000564709 ARID4BQ4LE39 1312 aaPredicted RBP30.57■■■□□ 2.48
SPSB3-206ENST00000564709 CCDC144AA2RUR9 1427 aa30.56■■■□□ 2.48
SPSB3-206ENST00000564709 ROCK2O75116 1388 aaKnown RBP30.55■■■□□ 2.48
SPSB3-206ENST00000564709 PLEKHH2Q8IVE3 1493 aa30.53■■■□□ 2.48
SPSB3-206ENST00000564709 PLXNC1O60486 1568 aa30.52■■■□□ 2.48
SPSB3-206ENST00000564709 RGL3Q3MIN7 710 aa30.52■■■□□ 2.48
SPSB3-206ENST00000564709 ZCCHC11Q5TAX3 1644 aaKnown RBP30.51■■■□□ 2.47
SPSB3-206ENST00000564709 PLA2R1Q13018 1463 aa30.5■■■□□ 2.47
SPSB3-206ENST00000564709 TRPM1Q7Z4N2 1603 aa30.5■■■□□ 2.47
SPSB3-206ENST00000564709 IQGAP3Q86VI3 1631 aa30.48■■■□□ 2.47
SPSB3-206ENST00000564709 PRAG1Q86YV5 1406 aa30.48■■■□□ 2.47
SPSB3-206ENST00000564709 SENP3-EIF4A1A0A087X0R7 540 aa30.45■■■□□ 2.47
SPSB3-206ENST00000564709 RBM19Q9Y4C8 960 aaKnown RBP30.44■■■□□ 2.46
SPSB3-206ENST00000564709 E9PCH4 1651 aa30.43■■■□□ 2.46
SPSB3-206ENST00000564709 A2MP01023 1474 aa30.43■■■□□ 2.46
SPSB3-206ENST00000564709 DUOX2Q9NRD8 1548 aa30.43■■■□□ 2.46
SPSB3-206ENST00000564709 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
SPSB3-206ENST00000564709 NBPF1Q3BBV0 1214 aa30.41■■■□□ 2.46
SPSB3-206ENST00000564709 PLCH2O75038 1416 aa30.41■■■□□ 2.46
SPSB3-206ENST00000564709 MYT1Q01538 1121 aa30.39■■■□□ 2.45
SPSB3-206ENST00000564709 ABCC1P33527 1531 aa30.37■■■□□ 2.45
SPSB3-206ENST00000564709 TMC1Q8TDI8 760 aa30.37■■■□□ 2.45
SPSB3-206ENST00000564709 ERBINQ96RT1 1412 aa30.36■■■□□ 2.45
SPSB3-206ENST00000564709 TRAPPC8Q9Y2L5 1435 aa30.35■■■□□ 2.45
SPSB3-206ENST00000564709 MAGI2Q86UL8 1455 aa30.35■■■□□ 2.45
SPSB3-206ENST00000564709 EFCAB2Q5VUJ9 269 aa30.35■■■□□ 2.45
SPSB3-206ENST00000564709 PNISRQ8TF01 805 aaKnown RBP30.35■■■□□ 2.45
SPSB3-206ENST00000564709 PPP4R2Q9NY27 417 aa30.34■■■□□ 2.45
SPSB3-206ENST00000564709 ERICH6BQ5W0A0 696 aa30.33■■■□□ 2.45
SPSB3-206ENST00000564709 UHRF1BP1LA0JNW5 1464 aa30.32■■■□□ 2.44
SPSB3-206ENST00000564709 SMG6Q86US8 1419 aaKnown RBP30.31■■■□□ 2.44
SPSB3-206ENST00000564709 GPRASP1Q5JY77 1395 aa30.28■■■□□ 2.44
SPSB3-206ENST00000564709 MYBBP1AQ9BQG0 1328 aaKnown RBP30.28■■■□□ 2.44
SPSB3-206ENST00000564709 PRDM15P57071 1507 aaPredicted RBP30.28■■■□□ 2.44
SPSB3-206ENST00000564709 B4GALNT3Q6L9W6 998 aa30.27■■■□□ 2.44
SPSB3-206ENST00000564709 LAMC1P11047 1609 aa30.26■■■□□ 2.43
SPSB3-206ENST00000564709 NUDCQ9Y266 331 aa30.25■■■□□ 2.43
SPSB3-206ENST00000564709 EIF2AK4Q9P2K8 1649 aaKnown RBP30.25■■■□□ 2.43
SPSB3-206ENST00000564709 ATP10AO60312 1499 aa30.25■■■□□ 2.43
SPSB3-206ENST00000564709 RALBP1Q15311 655 aa30.24■■■□□ 2.43
SPSB3-206ENST00000564709 BRD4O60885 1362 aaPredicted RBP30.24■■■□□ 2.43
SPSB3-206ENST00000564709 DISP3Q9P2K9 1392 aa30.24■■■□□ 2.43
SPSB3-206ENST00000564709 COL17A1Q9UMD9 1497 aaPredicted RBP30.23■■■□□ 2.43
SPSB3-206ENST00000564709 AFAP1Q8N556 730 aa30.22■■■□□ 2.43
SPSB3-206ENST00000564709 SPAG9O60271 1321 aaKnown RBP30.22■■■□□ 2.43
SPSB3-206ENST00000564709 KTN1Q86UP2 1357 aaKnown RBP30.21■■■□□ 2.43
SPSB3-206ENST00000564709 LRPPRCP42704 1394 aaKnown RBP30.21■■■□□ 2.43
SPSB3-206ENST00000564709 ZFYVE16Q7Z3T8 1539 aa30.2■■■□□ 2.42
SPSB3-206ENST00000564709 TESK2Q96S53 571 aa30.19■■■□□ 2.42
SPSB3-206ENST00000564709 RNF17Q9BXT8 1623 aaKnown RBP30.16■■■□□ 2.42
SPSB3-206ENST00000564709 PARD3Q8TEW0 1356 aa30.15■■■□□ 2.42
SPSB3-206ENST00000564709 ANP32EQ9BTT0 268 aa30.14■■■□□ 2.42
SPSB3-206ENST00000564709 PER1O15534 1290 aaPredicted RBP30.13■■■□□ 2.41
SPSB3-206ENST00000564709 CC2D1BQ5T0F9 858 aaKnown RBP30.11■■■□□ 2.41
SPSB3-206ENST00000564709 NLRP13Q86W25 1043 aa30.11■■■□□ 2.41
SPSB3-206ENST00000564709 WDR7Q9Y4E6 1490 aa30.1■■■□□ 2.41
SPSB3-206ENST00000564709 SPHKAPQ2M3C7 1700 aa30.1■■■□□ 2.41
SPSB3-206ENST00000564709 ARAP3Q8WWN8 1544 aa30.1■■■□□ 2.41
SPSB3-206ENST00000564709 MADDQ8WXG6 1647 aa30.1■■■□□ 2.41
SPSB3-206ENST00000564709 RTEL1-TNFRSF6BF6WH68 1400 aa30.09■■■□□ 2.41
SPSB3-206ENST00000564709 TRPM2O94759 1503 aa30.08■■■□□ 2.41
SPSB3-206ENST00000564709 PANK3Q9H999 370 aa30.08■■■□□ 2.41
SPSB3-206ENST00000564709 CEP152O94986 1710 aa30.08■■■□□ 2.41
SPSB3-206ENST00000564709 TMF1P82094 1093 aa30.07■■■□□ 2.4
SPSB3-206ENST00000564709 SALL2Q9Y467 1007 aaPredicted RBP30.07■■■□□ 2.4
SPSB3-206ENST00000564709 RNF123Q5XPI4 1314 aa30.07■■■□□ 2.4
SPSB3-206ENST00000564709 FANCAO15360 1455 aa30.07■■■□□ 2.4
SPSB3-206ENST00000564709 CLTCL1P53675 1640 aa30.07■■■□□ 2.4
SPSB3-206ENST00000564709 DEPDC5O75140 1603 aa30.06■■■□□ 2.4
SPSB3-206ENST00000564709 ABCA9Q8IUA7 1624 aa30.05■■■□□ 2.4
SPSB3-206ENST00000564709 ATP7AQ04656 1500 aa30.05■■■□□ 2.4
SPSB3-206ENST00000564709 INO80Q9ULG1 1556 aaPredicted RBP30.04■■■□□ 2.4
SPSB3-206ENST00000564709 MYT1LQ9UL68 1186 aa30.04■■■□□ 2.4
SPSB3-206ENST00000564709 IQGAP1P46940 1657 aa30.02■■■□□ 2.4
SPSB3-206ENST00000564709 TET3O43151 1660 aa30.01■■■□□ 2.4
SPSB3-206ENST00000564709 PTPRTO14522 1441 aa29.98■■■□□ 2.39
SPSB3-206ENST00000564709 ADGRL1O94910 1474 aa29.98■■■□□ 2.39
SPSB3-206ENST00000564709 MSH5O43196 834 aa29.97■■■□□ 2.39
SPSB3-206ENST00000564709 SCAPERQ9BY12 1400 aa29.97■■■□□ 2.39
SPSB3-206ENST00000564709 KIF3BO15066 747 aa29.97■■■□□ 2.39
SPSB3-206ENST00000564709 WASHC2CQ9Y4E1 1318 aa29.94■■■□□ 2.38
SPSB3-206ENST00000564709 KANK1Q14678 1352 aa29.94■■■□□ 2.38
SPSB3-206ENST00000564709 CCDC136Q96JN2 1154 aa29.93■■■□□ 2.38
SPSB3-206ENST00000564709 VWDEQ8N2E2 1590 aa29.93■■■□□ 2.38
SPSB3-206ENST00000564709 FANCIQ9NVI1 1328 aa29.92■■■□□ 2.38
SPSB3-206ENST00000564709 UGGT1Q9NYU2 1555 aa29.91■■■□□ 2.38
SPSB3-206ENST00000564709 ASXL2Q76L83 1435 aa29.9■■■□□ 2.38
SPSB3-206ENST00000564709 MROH1Q8NDA8 1641 aa29.9■■■□□ 2.38
SPSB3-206ENST00000564709 SCAF11Q99590 1463 aaKnown RBP29.89■■■□□ 2.38
SPSB3-206ENST00000564709 RRP1P56182 461 aaKnown RBP29.85■■■□□ 2.37
SPSB3-206ENST00000564709 CDCA7LQ96GN5 454 aa29.85■■■□□ 2.37
SPSB3-206ENST00000564709 BLMP54132 1417 aaPredicted RBP29.85■■■□□ 2.37
SPSB3-206ENST00000564709 RCAN3Q9UKA8 241 aa29.84■■■□□ 2.37
SPSB3-206ENST00000564709 KIDINS220Q9ULH0 1771 aa29.82■■■□□ 2.36
SPSB3-206ENST00000564709 KNSTRNQ9Y448 316 aa29.82■■■□□ 2.36
SPSB3-206ENST00000564709 SYNMO15061 1565 aa29.81■■■□□ 2.36
SPSB3-206ENST00000564709 MYOM1P52179 1685 aa29.8■■■□□ 2.36
SPSB3-206ENST00000564709 PDE3BQ13370 1112 aa29.79■■■□□ 2.36
SPSB3-206ENST00000564709 KIF1BO60333 1816 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms