RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 ITGAEP38570 1179 aa10.94□□□□□ -0.66
MAP1LC3B-205ENST00000564638 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
MAP1LC3B-205ENST00000564638 RTEL1-TNFRSF6BF6WH68 1400 aa10.93□□□□□ -0.66
MAP1LC3B-205ENST00000564638 ABCC5O15440 1437 aa10.93□□□□□ -0.66
MAP1LC3B-205ENST00000564638 MAST1Q9Y2H9 1570 aa10.93□□□□□ -0.66
MAP1LC3B-205ENST00000564638 A2MP01023 1474 aa10.93□□□□□ -0.66
MAP1LC3B-205ENST00000564638 RAB3GAP2Q9H2M9 1393 aa10.92□□□□□ -0.66
MAP1LC3B-205ENST00000564638 REREQ9P2R6 1566 aa10.92□□□□□ -0.66
MAP1LC3B-205ENST00000564638 SHANK2Q9UPX8 1470 aa10.91□□□□□ -0.66
MAP1LC3B-205ENST00000564638 GCC2Q8IWJ2 1684 aa10.9□□□□□ -0.66
MAP1LC3B-205ENST00000564638 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.67
MAP1LC3B-205ENST00000564638 PLXNC1O60486 1568 aa10.9□□□□□ -0.67
MAP1LC3B-205ENST00000564638 RRP7BPQ9NSQ0 103 aa10.89□□□□□ -0.67
MAP1LC3B-205ENST00000564638 DHX29Q7Z478 1369 aaKnown RBP10.89□□□□□ -0.67
MAP1LC3B-205ENST00000564638 KIF15Q9NS87 1388 aa10.89□□□□□ -0.67
MAP1LC3B-205ENST00000564638 AGLP35573 1532 aa10.89□□□□□ -0.67
MAP1LC3B-205ENST00000564638 PREX1Q8TCU6 1659 aa10.89□□□□□ -0.67
MAP1LC3B-205ENST00000564638 CEBPAP49715 358 aaPredicted RBP10.88□□□□□ -0.67
MAP1LC3B-205ENST00000564638 ANKRD30AQ9BXX3 1397 aa10.88□□□□□ -0.67
MAP1LC3B-205ENST00000564638 IQSEC2Q5JU85 1478 aa10.87□□□□□ -0.67
MAP1LC3B-205ENST00000564638 SRCAPQ6ZRS2 3230 aa10.87□□□□□ -0.67
MAP1LC3B-205ENST00000564638 PTPRTO14522 1441 aa10.87□□□□□ -0.67
MAP1LC3B-205ENST00000564638 KIF3BO15066 747 aa10.87□□□□□ -0.67
MAP1LC3B-205ENST00000564638 GGT6Q6P531 493 aa10.87□□□□□ -0.67
MAP1LC3B-205ENST00000564638 ESF1Q9H501 851 aaKnown RBP10.87□□□□□ -0.67
MAP1LC3B-205ENST00000564638 HFM1A2PYH4 1435 aa10.86□□□□□ -0.67
MAP1LC3B-205ENST00000564638 PTPRKQ15262 1439 aa10.86□□□□□ -0.67
MAP1LC3B-205ENST00000564638 DUOX2Q9NRD8 1548 aa10.86□□□□□ -0.67
MAP1LC3B-205ENST00000564638 ADGRL2O95490 1459 aa10.85□□□□□ -0.67
MAP1LC3B-205ENST00000564638 MED1Q15648 1581 aaPredicted RBP10.85□□□□□ -0.67
MAP1LC3B-205ENST00000564638 DMRT2Q9Y5R5 561 aa10.84□□□□□ -0.67
MAP1LC3B-205ENST00000564638 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
MAP1LC3B-205ENST00000564638 CLTCQ00610 1675 aaKnown RBP10.83□□□□□ -0.68
MAP1LC3B-205ENST00000564638 EIF2AK4Q9P2K8 1649 aaKnown RBP10.83□□□□□ -0.68
MAP1LC3B-205ENST00000564638 ERBINQ96RT1 1412 aa10.82□□□□□ -0.68
MAP1LC3B-205ENST00000564638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.81□□□□□ -0.687e-8■□□□□ 8.3
MAP1LC3B-205ENST00000564638 RNF17Q9BXT8 1623 aaKnown RBP10.8□□□□□ -0.68
MAP1LC3B-205ENST00000564638 ROCK1Q13464 1354 aa10.8□□□□□ -0.68
MAP1LC3B-205ENST00000564638 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
MAP1LC3B-205ENST00000564638 NAIPQ13075 1403 aa10.8□□□□□ -0.68
MAP1LC3B-205ENST00000564638 CNTLNQ9NXG0 1405 aa10.8□□□□□ -0.68
MAP1LC3B-205ENST00000564638 ANKRD50Q9ULJ7 1429 aa10.8□□□□□ -0.68
MAP1LC3B-205ENST00000564638 CEP152O94986 1710 aa10.8□□□□□ -0.68
MAP1LC3B-205ENST00000564638 C3P01024 1663 aa10.79□□□□□ -0.68
MAP1LC3B-205ENST00000564638 MROH2AA6NES4 1674 aa10.79□□□□□ -0.68
MAP1LC3B-205ENST00000564638 KDM5DQ9BY66 1539 aa10.79□□□□□ -0.68
MAP1LC3B-205ENST00000564638 MROH1Q8NDA8 1641 aa10.78□□□□□ -0.68
MAP1LC3B-205ENST00000564638 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
MAP1LC3B-205ENST00000564638 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
MAP1LC3B-205ENST00000564638 UHRF1BP1Q6BDS2 1440 aa10.77□□□□□ -0.68
MAP1LC3B-205ENST00000564638 UBAP1LF5GYI3 381 aa10.77□□□□□ -0.69
MAP1LC3B-205ENST00000564638 HSPA1LP34931 641 aa10.77□□□□□ -0.69
MAP1LC3B-205ENST00000564638 ZNF335Q9H4Z2 1342 aaPredicted RBP10.77□□□□□ -0.69
MAP1LC3B-205ENST00000564638 KANK1Q14678 1352 aa10.77□□□□□ -0.69
MAP1LC3B-205ENST00000564638 ABCC3O15438 1527 aa10.76□□□□□ -0.69
MAP1LC3B-205ENST00000564638 PRDM15P57071 1507 aaPredicted RBP10.76□□□□□ -0.69
MAP1LC3B-205ENST00000564638 DEPDC5O75140 1603 aa10.76□□□□□ -0.69
MAP1LC3B-205ENST00000564638 ZMYM3Q14202 1370 aa10.76□□□□□ -0.69
MAP1LC3B-205ENST00000564638 ZC3H13Q5T200 1668 aaKnown RBP10.76□□□□□ -0.69
MAP1LC3B-205ENST00000564638 SETD1BQ9UPS6 1966 aaKnown RBP10.76□□□□□ -0.69
MAP1LC3B-205ENST00000564638 FAM135AQ9P2D6 1515 aa10.75□□□□□ -0.69
MAP1LC3B-205ENST00000564638 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
MAP1LC3B-205ENST00000564638 CAMSAP1Q5T5Y3 1602 aa10.74□□□□□ -0.69
MAP1LC3B-205ENST00000564638 DIEXFQ68CQ4 756 aaKnown RBP10.74□□□□□ -0.69
MAP1LC3B-205ENST00000564638 UNC13BO14795 1591 aa10.73□□□□□ -0.69
MAP1LC3B-205ENST00000564638 RGS17Q9UGC6 210 aaPredicted RBP10.72□□□□□ -0.69
MAP1LC3B-205ENST00000564638 PZPP20742 1482 aa10.71□□□□□ -0.69
MAP1LC3B-205ENST00000564638 FBXO31Q5XUX0 539 aaPredicted RBP10.71□□□□□ -0.69
MAP1LC3B-205ENST00000564638 TRIM52Q96A61 297 aa10.71□□□□□ -0.69
MAP1LC3B-205ENST00000564638 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
MAP1LC3B-205ENST00000564638 TIMELESSQ9UNS1 1208 aa10.71□□□□□ -0.69
MAP1LC3B-205ENST00000564638 VWDEQ8N2E2 1590 aa10.7□□□□□ -0.7
MAP1LC3B-205ENST00000564638 NUP155O75694 1391 aa10.7□□□□□ -0.7
MAP1LC3B-205ENST00000564638 TET3O43151 1660 aa10.69□□□□□ -0.7
MAP1LC3B-205ENST00000564638 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
MAP1LC3B-205ENST00000564638 EFCAB6Q5THR3 1501 aa10.68□□□□□ -0.7
MAP1LC3B-205ENST00000564638 LMTK2Q8IWU2 1503 aa10.68□□□□□ -0.7
MAP1LC3B-205ENST00000564638 NPATQ14207 1427 aa10.68□□□□□ -0.7
MAP1LC3B-205ENST00000564638 TNRQ92752 1358 aa10.68□□□□□ -0.7
MAP1LC3B-205ENST00000564638 NCKAP5LQ9HCH0 1330 aa10.68□□□□□ -0.7
MAP1LC3B-205ENST00000564638 MYO3AQ8NEV4 1616 aa10.68□□□□□ -0.7
MAP1LC3B-205ENST00000564638 ERVK-7P63135 1459 aa10.68□□□□□ -0.7
MAP1LC3B-205ENST00000564638 PIAS4Q8N2W9 510 aaPredicted RBP10.67□□□□□ -0.7
MAP1LC3B-205ENST00000564638 TONSLQ96HA7 1378 aa10.66□□□□□ -0.7
MAP1LC3B-205ENST00000564638 NEUROD1Q13562 356 aa10.66□□□□□ -0.7
MAP1LC3B-205ENST00000564638 ARHGAP31Q2M1Z3 1444 aa10.66□□□□□ -0.7
MAP1LC3B-205ENST00000564638 SIN3AQ96ST3 1273 aa10.65□□□□□ -0.7
MAP1LC3B-205ENST00000564638 E9PCH4 1651 aa10.65□□□□□ -0.7
MAP1LC3B-205ENST00000564638 CEP170BQ9Y4F5 1589 aaPredicted RBP10.65□□□□□ -0.71
MAP1LC3B-205ENST00000564638 ZNF142P52746 1687 aaPredicted RBP10.64□□□□□ -0.71
MAP1LC3B-205ENST00000564638 A2ML1A8K2U0 1454 aa10.62□□□□□ -0.71
MAP1LC3B-205ENST00000564638 SYNMO15061 1565 aa10.62□□□□□ -0.71
MAP1LC3B-205ENST00000564638 PIP4K2BP78356 416 aa10.62□□□□□ -0.71
MAP1LC3B-205ENST00000564638 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
MAP1LC3B-205ENST00000564638 RPRD2Q5VT52 1461 aaKnown RBP10.61□□□□□ -0.71
MAP1LC3B-205ENST00000564638 NLRP1Q9C000 1473 aa10.61□□□□□ -0.71
MAP1LC3B-205ENST00000564638 PKD2Q13563 968 aa10.61□□□□□ -0.71
MAP1LC3B-205ENST00000564638 STAG3Q9UJ98 1225 aa10.61□□□□□ -0.71
MAP1LC3B-205ENST00000564638 SPHKAPQ2M3C7 1700 aa10.61□□□□□ -0.71
MAP1LC3B-205ENST00000564638 UGGT1Q9NYU2 1555 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms