RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 RNF17Q9BXT8 1623 aaKnown RBP18.74■□□□□ 0.59
KARS-204ENST00000564578 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
KARS-204ENST00000564578 DEPDC5O75140 1603 aa18.72■□□□□ 0.59
KARS-204ENST00000564578 MADDQ8WXG6 1647 aa18.71■□□□□ 0.59
KARS-204ENST00000564578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.597e-7■■□□□ 12.3
KARS-204ENST00000564578 SETD5Q9C0A6 1442 aa18.71■□□□□ 0.59
KARS-204ENST00000564578 PRDM15P57071 1507 aaPredicted RBP18.71■□□□□ 0.59
KARS-204ENST00000564578 WASHC2CQ9Y4E1 1318 aa18.69■□□□□ 0.58
KARS-204ENST00000564578 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
KARS-204ENST00000564578 RAB3GAP2Q9H2M9 1393 aa18.67■□□□□ 0.58
KARS-204ENST00000564578 UNC13BO14795 1591 aa18.67■□□□□ 0.58
KARS-204ENST00000564578 FER1L4A9Z1Z3 1794 aa18.67■□□□□ 0.58
KARS-204ENST00000564578 KDM5DQ9BY66 1539 aa18.67■□□□□ 0.58
KARS-204ENST00000564578 ABCC3O15438 1527 aa18.66■□□□□ 0.58
KARS-204ENST00000564578 NUP155O75694 1391 aa18.65■□□□□ 0.58
KARS-204ENST00000564578 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
KARS-204ENST00000564578 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
KARS-204ENST00000564578 PTPRMP28827 1452 aa18.65■□□□□ 0.58
KARS-204ENST00000564578 ZMYM3Q14202 1370 aa18.65■□□□□ 0.58
KARS-204ENST00000564578 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.57
KARS-204ENST00000564578 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
KARS-204ENST00000564578 RIMS1Q86UR5 1692 aaKnown RBP18.64■□□□□ 0.57
KARS-204ENST00000564578 CEBPAP49715 358 aaPredicted RBP18.64■□□□□ 0.57
KARS-204ENST00000564578 KANK1Q14678 1352 aa18.63■□□□□ 0.57
KARS-204ENST00000564578 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
KARS-204ENST00000564578 LMTK2Q8IWU2 1503 aa18.62■□□□□ 0.57
KARS-204ENST00000564578 HRCP23327 699 aa18.61■□□□□ 0.57
KARS-204ENST00000564578 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
KARS-204ENST00000564578 CEP152O94986 1710 aa18.6■□□□□ 0.57
KARS-204ENST00000564578 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
KARS-204ENST00000564578 IQGAP3Q86VI3 1631 aa18.59■□□□□ 0.57
KARS-204ENST00000564578 MROH2AA6NES4 1674 aa18.59■□□□□ 0.57
KARS-204ENST00000564578 PZPP20742 1482 aa18.58■□□□□ 0.56
KARS-204ENST00000564578 C3P01024 1663 aa18.57■□□□□ 0.56
KARS-204ENST00000564578 NPATQ14207 1427 aa18.57■□□□□ 0.56
KARS-204ENST00000564578 ARHGAP31Q2M1Z3 1444 aa18.57■□□□□ 0.56
KARS-204ENST00000564578 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
KARS-204ENST00000564578 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
KARS-204ENST00000564578 CAMSAP1Q5T5Y3 1602 aa18.56■□□□□ 0.56
KARS-204ENST00000564578 EFCAB6Q5THR3 1501 aa18.55■□□□□ 0.56
KARS-204ENST00000564578 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
KARS-204ENST00000564578 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
KARS-204ENST00000564578 TET3O43151 1660 aa18.54■□□□□ 0.56
KARS-204ENST00000564578 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
KARS-204ENST00000564578 PKD2Q13563 968 aa18.51■□□□□ 0.55
KARS-204ENST00000564578 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
KARS-204ENST00000564578 E9PCH4 1651 aa18.5■□□□□ 0.55
KARS-204ENST00000564578 ERVK-7P63135 1459 aa18.49■□□□□ 0.55
KARS-204ENST00000564578 CFAP65Q6ZU64 1925 aaKnown RBP18.49■□□□□ 0.55
KARS-204ENST00000564578 FOXD1Q16676 465 aa18.48■□□□□ 0.55
KARS-204ENST00000564578 NOS1P29475 1434 aa18.48■□□□□ 0.55
KARS-204ENST00000564578 SPATA31D1Q6ZQQ2 1576 aa18.48■□□□□ 0.55
KARS-204ENST00000564578 PREX1Q8TCU6 1659 aa18.46■□□□□ 0.55
KARS-204ENST00000564578 TNRQ92752 1358 aa18.46■□□□□ 0.55
KARS-204ENST00000564578 SETD1BQ9UPS6 1966 aaKnown RBP18.45■□□□□ 0.54
KARS-204ENST00000564578 PTPRTO14522 1441 aa18.44■□□□□ 0.54
KARS-204ENST00000564578 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
KARS-204ENST00000564578 SYNMO15061 1565 aa18.43■□□□□ 0.54
KARS-204ENST00000564578 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
KARS-204ENST00000564578 IDI1Q13907 227 aa18.41■□□□□ 0.54
KARS-204ENST00000564578 UGGT1Q9NYU2 1555 aa18.39■□□□□ 0.53
KARS-204ENST00000564578 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
KARS-204ENST00000564578 SLC52A1Q9NWF4 448 aa18.38■□□□□ 0.53
KARS-204ENST00000564578 LMTK3Q96Q04 1460 aa18.38■□□□□ 0.53
KARS-204ENST00000564578 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
KARS-204ENST00000564578 UHRF1BP1Q6BDS2 1440 aa18.38■□□□□ 0.53
KARS-204ENST00000564578 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
KARS-204ENST00000564578 SPHKAPQ2M3C7 1700 aa18.37■□□□□ 0.53
KARS-204ENST00000564578 ANKRD30BQ9BXX2 1392 aa18.36■□□□□ 0.53
KARS-204ENST00000564578 TRPM2O94759 1503 aa18.36■□□□□ 0.53
KARS-204ENST00000564578 PIK3C2BO00750 1634 aa18.36■□□□□ 0.53
KARS-204ENST00000564578 A2ML1A8K2U0 1454 aa18.34■□□□□ 0.53
KARS-204ENST00000564578 CEP170BQ9Y4F5 1589 aaPredicted RBP18.34■□□□□ 0.53
KARS-204ENST00000564578 ZNF142P52746 1687 aaPredicted RBP18.32■□□□□ 0.52
KARS-204ENST00000564578 HSPA2P54652 639 aa18.31■□□□□ 0.52
KARS-204ENST00000564578 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
KARS-204ENST00000564578 CCDC144AA2RUR9 1427 aa18.29■□□□□ 0.52
KARS-204ENST00000564578 UBR1Q8IWV7 1749 aa18.28■□□□□ 0.52
KARS-204ENST00000564578 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
KARS-204ENST00000564578 TMEM131LA2VDJ0 1609 aa18.28■□□□□ 0.52
KARS-204ENST00000564578 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.51
KARS-204ENST00000564578 ADGRB3O60242 1522 aa18.26■□□□□ 0.51
KARS-204ENST00000564578 CHGAP10645 457 aaKnown RBP18.26■□□□□ 0.51
KARS-204ENST00000564578 KDM5AP29375 1690 aaKnown RBP18.26■□□□□ 0.51
KARS-204ENST00000564578 SPATA31E1Q6ZUB1 1445 aa18.23■□□□□ 0.51
KARS-204ENST00000564578 TMEM2Q9UHN6 1383 aa18.23■□□□□ 0.51
KARS-204ENST00000564578 SIN3AQ96ST3 1273 aa18.23■□□□□ 0.51
KARS-204ENST00000564578 ARHGAP23Q9P227 1491 aa18.22■□□□□ 0.51
KARS-204ENST00000564578 MYO5BQ9ULV0 1848 aa18.22■□□□□ 0.51
KARS-204ENST00000564578 LTKP29376 864 aa18.21■□□□□ 0.51
KARS-204ENST00000564578 SLIT1O75093 1534 aa18.21■□□□□ 0.51
KARS-204ENST00000564578 ZFYVE9O95405 1425 aa18.2■□□□□ 0.5
KARS-204ENST00000564578 KIF1BO60333 1816 aa18.2■□□□□ 0.5
KARS-204ENST00000564578 RGL3Q3MIN7 710 aa18.19■□□□□ 0.5
KARS-204ENST00000564578 NCKAP5LQ9HCH0 1330 aa18.18■□□□□ 0.5
KARS-204ENST00000564578 ZNF326Q5BKZ1 582 aaKnown RBP18.18■□□□□ 0.5
KARS-204ENST00000564578 NEURL4Q96JN8 1562 aa18.18■□□□□ 0.5
KARS-204ENST00000564578 ANKLE2Q86XL3 938 aa18.17■□□□□ 0.5
KARS-204ENST00000564578 RIMS2Q9UQ26 1411 aa18.17■□□□□ 0.5
KARS-204ENST00000564578 STRCQ7RTU9 1775 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms