RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
AC055855.3-201ENST00000564269 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
AC055855.3-201ENST00000564269 GTPBP6O43824 516 aaPredicted RBP9.55□□□□□ -0.88
AC055855.3-201ENST00000564269 FOXK1P85037 733 aa9.55□□□□□ -0.88
AC055855.3-201ENST00000564269 PLPP6Q8IY26 295 aa9.55□□□□□ -0.88
AC055855.3-201ENST00000564269 ZNF687Q8N1G0 1237 aa9.55□□□□□ -0.88
AC055855.3-201ENST00000564269 GPHNQ9NQX3 736 aaPredicted RBP9.55□□□□□ -0.88
AC055855.3-201ENST00000564269 DSG2Q14126 1118 aa9.54□□□□□ -0.88
AC055855.3-201ENST00000564269 ERCC6L2Q5T890 1561 aa9.53□□□□□ -0.88
AC055855.3-201ENST00000564269 GRIN2AQ12879 1464 aa9.53□□□□□ -0.88
AC055855.3-201ENST00000564269 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
AC055855.3-201ENST00000564269 NUP160Q12769 1436 aa9.52□□□□□ -0.89
AC055855.3-201ENST00000564269 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
AC055855.3-201ENST00000564269 LHX6Q9UPM6 363 aa9.52□□□□□ -0.89
AC055855.3-201ENST00000564269 PBRM1Q86U86 1689 aa9.51□□□□□ -0.89
AC055855.3-201ENST00000564269 PTCD2Q8WV60 388 aaKnown RBP9.49□□□□□ -0.89
AC055855.3-201ENST00000564269 CRISPLD2Q9H0B8 497 aa9.49□□□□□ -0.89
AC055855.3-201ENST00000564269 CEP170Q5SW79 1584 aa9.49□□□□□ -0.89
AC055855.3-201ENST00000564269 FHAD1B1AJZ9 1412 aa9.48□□□□□ -0.89
AC055855.3-201ENST00000564269 ADAMTS12P58397 1594 aa9.47□□□□□ -0.89
AC055855.3-201ENST00000564269 SUPT5HO00267 1087 aaKnown RBP9.47□□□□□ -0.89
AC055855.3-201ENST00000564269 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
AC055855.3-201ENST00000564269 KDM4FA0A1W2PPD8 638 aa9.46□□□□□ -0.9
AC055855.3-201ENST00000564269 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
AC055855.3-201ENST00000564269 PRG4Q92954 1404 aaPredicted RBP9.45□□□□□ -0.9
AC055855.3-201ENST00000564269 PPP1R15BQ5SWA1 713 aa9.44□□□□□ -0.9
AC055855.3-201ENST00000564269 UPF1Q92900 1129 aaKnown RBP eCLIP9.44□□□□□ -0.9
AC055855.3-201ENST00000564269 SHROOM2Q13796 1616 aa9.44□□□□□ -0.9
AC055855.3-201ENST00000564269 TOP2BQ02880 1626 aa9.43□□□□□ -0.9
AC055855.3-201ENST00000564269 ERICH3Q5RHP9 1530 aa9.43□□□□□ -0.9
AC055855.3-201ENST00000564269 POTEEQ6S8J3 1075 aa9.43□□□□□ -0.9
AC055855.3-201ENST00000564269 ANKRD13DQ6ZTN6 518 aa9.43□□□□□ -0.9
AC055855.3-201ENST00000564269 AXIN2Q9Y2T1 843 aa9.43□□□□□ -0.9
AC055855.3-201ENST00000564269 PDE4AP27815 886 aa9.42□□□□□ -0.9
AC055855.3-201ENST00000564269 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
AC055855.3-201ENST00000564269 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
AC055855.3-201ENST00000564269 OXER1Q8TDS5 423 aa9.41□□□□□ -0.9
AC055855.3-201ENST00000564269 BIVM-ERCC5R4GMW8 1640 aa9.41□□□□□ -0.9
AC055855.3-201ENST00000564269 TBC1D12O60347 775 aa9.4□□□□□ -0.9
AC055855.3-201ENST00000564269 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
AC055855.3-201ENST00000564269 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
AC055855.3-201ENST00000564269 PBX2P40425 430 aa9.39□□□□□ -0.91
AC055855.3-201ENST00000564269 AMER1Q5JTC6 1135 aaPredicted RBP9.39□□□□□ -0.91
AC055855.3-201ENST00000564269 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
AC055855.3-201ENST00000564269 ABCC10Q5T3U5 1492 aa9.39□□□□□ -0.91
AC055855.3-201ENST00000564269 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
AC055855.3-201ENST00000564269 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
AC055855.3-201ENST00000564269 RNF166Q96A37 237 aaPredicted RBP9.37□□□□□ -0.91
AC055855.3-201ENST00000564269 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
AC055855.3-201ENST00000564269 MFSD10Q14728 455 aa9.35□□□□□ -0.91
AC055855.3-201ENST00000564269 BBXQ8WY36 941 aaPredicted RBP9.35□□□□□ -0.91
AC055855.3-201ENST00000564269 MAPKBP1O60336 1514 aa9.35□□□□□ -0.91
AC055855.3-201ENST00000564269 KIF13AQ9H1H9 1805 aa9.34□□□□□ -0.91
AC055855.3-201ENST00000564269 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
AC055855.3-201ENST00000564269 RUSC2Q8N2Y8 1516 aa9.34□□□□□ -0.91
AC055855.3-201ENST00000564269 IGF1RP08069 1367 aa9.34□□□□□ -0.91
AC055855.3-201ENST00000564269 ARHGAP33O14559 1287 aa9.33□□□□□ -0.92
AC055855.3-201ENST00000564269 PSEN2P49810 448 aa9.33□□□□□ -0.92
AC055855.3-201ENST00000564269 KIAA0586Q9BVV6 1533 aa9.32□□□□□ -0.92
AC055855.3-201ENST00000564269 PTGER2P43116 358 aa9.32□□□□□ -0.92
AC055855.3-201ENST00000564269 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
AC055855.3-201ENST00000564269 DIP2BQ9P265 1576 aa9.31□□□□□ -0.92
AC055855.3-201ENST00000564269 ADCY10Q96PN6 1610 aa9.31□□□□□ -0.92
AC055855.3-201ENST00000564269 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
AC055855.3-201ENST00000564269 EMILIN3Q9NT22 766 aa9.3□□□□□ -0.92
AC055855.3-201ENST00000564269 EVI5O60447 810 aa9.29□□□□□ -0.92
AC055855.3-201ENST00000564269 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
AC055855.3-201ENST00000564269 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
AC055855.3-201ENST00000564269 PTPRGP23470 1445 aa9.28□□□□□ -0.92
AC055855.3-201ENST00000564269 KIF27Q86VH2 1401 aa9.28□□□□□ -0.92
AC055855.3-201ENST00000564269 MAP3K9P80192 1104 aa9.27□□□□□ -0.93
AC055855.3-201ENST00000564269 ANO8Q9HCE9 1232 aaPredicted RBP9.27□□□□□ -0.93
AC055855.3-201ENST00000564269 FOSBP53539 338 aa9.26□□□□□ -0.93
AC055855.3-201ENST00000564269 SPRYD3Q8NCJ5 442 aa9.26□□□□□ -0.93
AC055855.3-201ENST00000564269 KDM6BO15054 1643 aa9.26□□□□□ -0.93
AC055855.3-201ENST00000564269 TTBK1Q5TCY1 1321 aaPredicted RBP9.26□□□□□ -0.93
AC055855.3-201ENST00000564269 CARMIL1Q5VZK9 1371 aa9.25□□□□□ -0.93
AC055855.3-201ENST00000564269 TNIKQ9UKE5 1360 aa9.24□□□□□ -0.93
AC055855.3-201ENST00000564269 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.24□□□□□ -0.93
AC055855.3-201ENST00000564269 ABCC2Q92887 1545 aa9.24□□□□□ -0.93
AC055855.3-201ENST00000564269 TK2O00142 265 aa9.23□□□□□ -0.93
AC055855.3-201ENST00000564269 BCL2L12Q9HB09 334 aa9.23□□□□□ -0.93
AC055855.3-201ENST00000564269 CARMIL2Q6F5E8 1435 aa9.22□□□□□ -0.93
AC055855.3-201ENST00000564269 ASXL2Q76L83 1435 aa9.22□□□□□ -0.93
AC055855.3-201ENST00000564269 CUL7Q14999 1698 aa9.22□□□□□ -0.93
AC055855.3-201ENST00000564269 PLB1Q6P1J6 1458 aa9.21□□□□□ -0.93
AC055855.3-201ENST00000564269 HRO43593 1189 aa9.21□□□□□ -0.94
AC055855.3-201ENST00000564269 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
AC055855.3-201ENST00000564269 PAXIP1Q6ZW49 1069 aaPredicted RBP9.21□□□□□ -0.94
AC055855.3-201ENST00000564269 KCNH8Q96L42 1107 aa9.21□□□□□ -0.94
AC055855.3-201ENST00000564269 CFAP44Q96MT7 982 aa9.21□□□□□ -0.94
AC055855.3-201ENST00000564269 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.94
AC055855.3-201ENST00000564269 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
AC055855.3-201ENST00000564269 ADAM33Q9BZ11 813 aa9.2□□□□□ -0.94
AC055855.3-201ENST00000564269 UACAQ9BZF9 1416 aa9.2□□□□□ -0.94
AC055855.3-201ENST00000564269 COL17A1Q9UMD9 1497 aaPredicted RBP9.2□□□□□ -0.94
AC055855.3-201ENST00000564269 GLI2P10070 1586 aa9.2□□□□□ -0.94
AC055855.3-201ENST00000564269 DPYSL4O14531 572 aa9.19□□□□□ -0.94
AC055855.3-201ENST00000564269 VPS9D1Q9Y2B5 631 aa9.19□□□□□ -0.94
AC055855.3-201ENST00000564269 PTPREP23469 700 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms