RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 BCORL1Q5H9F3 1711 aa15.55■□□□□ 0.08
ABCA3-203ENST00000563623 JPH4Q96JJ6 628 aa15.55■□□□□ 0.08
ABCA3-203ENST00000563623 WDR43Q15061 677 aaKnown RBP eCLIP15.55■□□□□ 0.08
ABCA3-203ENST00000563623 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
ABCA3-203ENST00000563623 PDE3BQ13370 1112 aa15.54■□□□□ 0.08
ABCA3-203ENST00000563623 RGS3P49796 1198 aa15.54■□□□□ 0.08
ABCA3-203ENST00000563623 IL27Q8NEV9 243 aa15.54■□□□□ 0.08
ABCA3-203ENST00000563623 BACH2Q9BYV9 841 aa15.54■□□□□ 0.08
ABCA3-203ENST00000563623 KIAA0586Q9BVV6 1533 aa15.52■□□□□ 0.08
ABCA3-203ENST00000563623 GPATCH8Q9UKJ3 1502 aaKnown RBP15.52■□□□□ 0.08
ABCA3-203ENST00000563623 PPM1GO15355 546 aaPredicted RBP15.52■□□□□ 0.07
ABCA3-203ENST00000563623 TARBP1Q13395 1621 aaKnown RBP15.51■□□□□ 0.07
ABCA3-203ENST00000563623 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
ABCA3-203ENST00000563623 PKNOX2Q96KN3 472 aa15.5■□□□□ 0.07
ABCA3-203ENST00000563623 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
ABCA3-203ENST00000563623 TMF1P82094 1093 aa15.5■□□□□ 0.07
ABCA3-203ENST00000563623 C20orf194Q5TEA3 1177 aa15.49■□□□□ 0.07
ABCA3-203ENST00000563623 DDRGK1Q96HY6 314 aa15.49■□□□□ 0.07
ABCA3-203ENST00000563623 KNSTRNQ9Y448 316 aa15.49■□□□□ 0.07
ABCA3-203ENST00000563623 DISP1Q96F81 1524 aa15.49■□□□□ 0.07
ABCA3-203ENST00000563623 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
ABCA3-203ENST00000563623 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
ABCA3-203ENST00000563623 RAPGEF6Q8TEU7 1601 aa15.48■□□□□ 0.07
ABCA3-203ENST00000563623 CCDC144AA2RUR9 1427 aa15.48■□□□□ 0.07
ABCA3-203ENST00000563623 CARMIL2Q6F5E8 1435 aa15.48■□□□□ 0.07
ABCA3-203ENST00000563623 MS4A1P11836 297 aa15.48■□□□□ 0.07
ABCA3-203ENST00000563623 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
ABCA3-203ENST00000563623 RALGAPBQ86X10 1494 aa15.48■□□□□ 0.07
ABCA3-203ENST00000563623 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
ABCA3-203ENST00000563623 KIAA0556O60303 1618 aa15.46■□□□□ 0.07
ABCA3-203ENST00000563623 CCDC146Q8IYE0 955 aa15.46■□□□□ 0.07
ABCA3-203ENST00000563623 KDM5CP41229 1560 aa15.46■□□□□ 0.07
ABCA3-203ENST00000563623 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
ABCA3-203ENST00000563623 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
ABCA3-203ENST00000563623 KIF14Q15058 1648 aa15.45■□□□□ 0.06
ABCA3-203ENST00000563623 PLEKHG5O94827 1062 aa15.44■□□□□ 0.06
ABCA3-203ENST00000563623 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
ABCA3-203ENST00000563623 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.44■□□□□ 0.06
ABCA3-203ENST00000563623 GRIN2AQ12879 1464 aa15.42■□□□□ 0.06
ABCA3-203ENST00000563623 UHRF1BP1Q6BDS2 1440 aa15.41■□□□□ 0.06
ABCA3-203ENST00000563623 PER1O15534 1290 aaPredicted RBP15.41■□□□□ 0.06
ABCA3-203ENST00000563623 DISP3Q9P2K9 1392 aa15.41■□□□□ 0.06
ABCA3-203ENST00000563623 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
ABCA3-203ENST00000563623 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
ABCA3-203ENST00000563623 GOLGA2Q08379 1002 aa15.4■□□□□ 0.06
ABCA3-203ENST00000563623 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
ABCA3-203ENST00000563623 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
ABCA3-203ENST00000563623 NEUROD2Q15784 382 aa15.38■□□□□ 0.05
ABCA3-203ENST00000563623 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
ABCA3-203ENST00000563623 PODXL2Q9NZ53 605 aa15.38■□□□□ 0.05
ABCA3-203ENST00000563623 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
ABCA3-203ENST00000563623 ADGRL2O95490 1459 aa15.37■□□□□ 0.05
ABCA3-203ENST00000563623 ITSN2Q9NZM3 1697 aa15.37■□□□□ 0.05
ABCA3-203ENST00000563623 BRPF3Q9ULD4 1205 aa15.37■□□□□ 0.05
ABCA3-203ENST00000563623 CENPQQ7L2Z9 268 aaPredicted RBP15.36■□□□□ 0.05
ABCA3-203ENST00000563623 PPP2R1AP30153 589 aa15.35■□□□□ 0.05
ABCA3-203ENST00000563623 FAM161AQ3B820 660 aa15.35■□□□□ 0.05
ABCA3-203ENST00000563623 MAGI1Q96QZ7 1491 aaPredicted RBP15.35■□□□□ 0.05
ABCA3-203ENST00000563623 APAF1O14727 1248 aa15.35■□□□□ 0.05
ABCA3-203ENST00000563623 TNNT2P45379 298 aaPredicted RBP15.35■□□□□ 0.05
ABCA3-203ENST00000563623 TESK2Q96S53 571 aa15.35■□□□□ 0.05
ABCA3-203ENST00000563623 GSE1Q14687 1217 aa15.35■□□□□ 0.05
ABCA3-203ENST00000563623 ARXQ96QS3 562 aa15.35■□□□□ 0.05
ABCA3-203ENST00000563623 ERBINQ96RT1 1412 aa15.34■□□□□ 0.05
ABCA3-203ENST00000563623 ADGBQ8N7X0 1667 aa15.34■□□□□ 0.05
ABCA3-203ENST00000563623 FRAT1Q92837 279 aaPredicted RBP15.34■□□□□ 0.05
ABCA3-203ENST00000563623 PRAG1Q86YV5 1406 aa15.34■□□□□ 0.05
ABCA3-203ENST00000563623 ARHGEF12Q9NZN5 1544 aa15.33■□□□□ 0.04
ABCA3-203ENST00000563623 ATP10BO94823 1461 aa15.31■□□□□ 0.04
ABCA3-203ENST00000563623 BCAR3O75815 825 aa15.31■□□□□ 0.04
ABCA3-203ENST00000563623 WASHC2CQ9Y4E1 1318 aa15.31■□□□□ 0.04
ABCA3-203ENST00000563623 PTPRGP23470 1445 aa15.31■□□□□ 0.04
ABCA3-203ENST00000563623 DUSP27Q5VZP5 1158 aa15.31■□□□□ 0.04
ABCA3-203ENST00000563623 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
ABCA3-203ENST00000563623 CDCA8Q53HL2 280 aa15.3■□□□□ 0.04
ABCA3-203ENST00000563623 RSPH4AQ5TD94 716 aa15.3■□□□□ 0.04
ABCA3-203ENST00000563623 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
ABCA3-203ENST00000563623 GLIPR1L2Q4G1C9 344 aa15.29■□□□□ 0.04
ABCA3-203ENST00000563623 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
ABCA3-203ENST00000563623 SLKQ9H2G2 1235 aaPredicted RBP15.28■□□□□ 0.04
ABCA3-203ENST00000563623 FAM135AQ9P2D6 1515 aa15.28■□□□□ 0.04
ABCA3-203ENST00000563623 COG6Q9Y2V7 657 aa15.27■□□□□ 0.03
ABCA3-203ENST00000563623 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.03
ABCA3-203ENST00000563623 RRP7AQ9Y3A4 280 aaKnown RBP15.26■□□□□ 0.03
ABCA3-203ENST00000563623 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
ABCA3-203ENST00000563623 A2MP01023 1474 aa15.25■□□□□ 0.03
ABCA3-203ENST00000563623 PLEKHH2Q8IVE3 1493 aa15.25■□□□□ 0.03
ABCA3-203ENST00000563623 PANK1Q8TE04 598 aa15.25■□□□□ 0.03
ABCA3-203ENST00000563623 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
ABCA3-203ENST00000563623 SLFN5Q08AF3 891 aa15.24■□□□□ 0.03
ABCA3-203ENST00000563623 COL17A1Q9UMD9 1497 aaPredicted RBP15.24■□□□□ 0.03
ABCA3-203ENST00000563623 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
ABCA3-203ENST00000563623 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
ABCA3-203ENST00000563623 C8orf34Q49A92 452 aa15.24■□□□□ 0.03
ABCA3-203ENST00000563623 BCL2L13Q9BXK5 485 aa15.24■□□□□ 0.03
ABCA3-203ENST00000563623 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
ABCA3-203ENST00000563623 ARHGAP5Q13017 1502 aa15.23■□□□□ 0.03
ABCA3-203ENST00000563623 SHANK2Q9UPX8 1470 aa15.23■□□□□ 0.03
ABCA3-203ENST00000563623 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
ABCA3-203ENST00000563623 VSIG10Q8N0Z9 540 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 263.6 ms