RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 RSPH4AQ5TD94 716 aa8.93□□□□□ -0.98
LINC01963-201ENST00000562038 ARHGAP5Q13017 1502 aa8.93□□□□□ -0.98
LINC01963-201ENST00000562038 KIDINS220Q9ULH0 1771 aa8.93□□□□□ -0.98
LINC01963-201ENST00000562038 SPHKAPQ2M3C7 1700 aa8.92□□□□□ -0.98
LINC01963-201ENST00000562038 IQGAP1P46940 1657 aa8.92□□□□□ -0.98
LINC01963-201ENST00000562038 MBD5Q9P267 1494 aa8.92□□□□□ -0.98
LINC01963-201ENST00000562038 KDM5DQ9BY66 1539 aa8.91□□□□□ -0.98
LINC01963-201ENST00000562038 ACIN1Q9UKV3 1341 aaKnown RBP8.91□□□□□ -0.98
LINC01963-201ENST00000562038 CAMSAP2Q08AD1 1489 aa8.91□□□□□ -0.98
LINC01963-201ENST00000562038 CCDC141Q6ZP82 1450 aa8.91□□□□□ -0.98
LINC01963-201ENST00000562038 HSPA2P54652 639 aa8.9□□□□□ -0.98
LINC01963-201ENST00000562038 A2ML1A8K2U0 1454 aa8.9□□□□□ -0.98
LINC01963-201ENST00000562038 GCC2Q8IWJ2 1684 aa8.9□□□□□ -0.98
LINC01963-201ENST00000562038 RRBP1Q9P2E9 1410 aaKnown RBP8.9□□□□□ -0.98
LINC01963-201ENST00000562038 MTUS2Q5JR59 1369 aa8.9□□□□□ -0.98
LINC01963-201ENST00000562038 FAM135BQ49AJ0 1406 aa8.9□□□□□ -0.99
LINC01963-201ENST00000562038 ATP7AQ04656 1500 aa8.89□□□□□ -0.99
LINC01963-201ENST00000562038 ABCC3O15438 1527 aa8.88□□□□□ -0.99
LINC01963-201ENST00000562038 APLP2Q06481 763 aa8.88□□□□□ -0.99
LINC01963-201ENST00000562038 SYCP2Q9BX26 1530 aa8.88□□□□□ -0.99
LINC01963-201ENST00000562038 CCNB3Q8WWL7 1395 aa8.88□□□□□ -0.99
LINC01963-201ENST00000562038 FGD6Q6ZV73 1430 aa8.87□□□□□ -0.99
LINC01963-201ENST00000562038 HSPA1LP34931 641 aa8.87□□□□□ -0.99
LINC01963-201ENST00000562038 UNC13BO14795 1591 aa8.86□□□□□ -0.99
LINC01963-201ENST00000562038 NWD1Q149M9 1564 aa8.86□□□□□ -0.99
LINC01963-201ENST00000562038 ROCK1Q13464 1354 aa8.86□□□□□ -0.99
LINC01963-201ENST00000562038 EFCAB2Q5VUJ9 269 aa8.86□□□□□ -0.99
LINC01963-201ENST00000562038 LMTK2Q8IWU2 1503 aa8.86□□□□□ -0.99
LINC01963-201ENST00000562038 DUOX2Q9NRD8 1548 aa8.86□□□□□ -0.99
LINC01963-201ENST00000562038 TOM1O60784 492 aa8.85□□□□□ -0.99
LINC01963-201ENST00000562038 ERBINQ96RT1 1412 aa8.85□□□□□ -0.99
LINC01963-201ENST00000562038 PRDM15P57071 1507 aaPredicted RBP8.85□□□□□ -0.99
LINC01963-201ENST00000562038 LAMC1P11047 1609 aa8.84□□□□□ -0.99
LINC01963-201ENST00000562038 AHDC1Q5TGY3 1603 aaPredicted RBP8.84□□□□□ -0.99
LINC01963-201ENST00000562038 COL16A1Q07092 1604 aaPredicted RBP8.84□□□□□ -0.99
LINC01963-201ENST00000562038 FOXD1Q16676 465 aa8.83□□□□□ -1
LINC01963-201ENST00000562038 P3H3Q8IVL6 736 aa8.83□□□□□ -1
LINC01963-201ENST00000562038 PPP6R1Q9UPN7 881 aa8.83□□□□□ -1
LINC01963-201ENST00000562038 UBAP1LF5GYI3 381 aa8.83□□□□□ -1
LINC01963-201ENST00000562038 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -1
LINC01963-201ENST00000562038 SCAPERQ9BY12 1400 aa8.82□□□□□ -1
LINC01963-201ENST00000562038 DAPK1P53355 1430 aa8.81□□□□□ -1
LINC01963-201ENST00000562038 MROH1Q8NDA8 1641 aa8.8□□□□□ -1
LINC01963-201ENST00000562038 DIP2AQ14689 1571 aa8.8□□□□□ -1
LINC01963-201ENST00000562038 CLTCQ00610 1675 aaKnown RBP8.8□□□□□ -1
LINC01963-201ENST00000562038 IQGAP3Q86VI3 1631 aa8.79□□□□□ -1
LINC01963-201ENST00000562038 PHF23Q9BUL5 403 aaPredicted RBP8.79□□□□□ -1
LINC01963-201ENST00000562038 LOC105371045A0A1W2PR82 267 aa8.79□□□□□ -1
LINC01963-201ENST00000562038 NCBP3Q53F19 620 aaKnown RBP8.79□□□□□ -1
LINC01963-201ENST00000562038 ROBO1Q9Y6N7 1651 aa8.79□□□□□ -1
LINC01963-201ENST00000562038 PHLPP1O60346 1717 aa8.78□□□□□ -1
LINC01963-201ENST00000562038 RAPGEF3O95398 923 aa8.78□□□□□ -1
LINC01963-201ENST00000562038 A2MP01023 1474 aa8.78□□□□□ -1
LINC01963-201ENST00000562038 ABCC5O15440 1437 aa8.78□□□□□ -1
LINC01963-201ENST00000562038 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.78□□□□□ -1
LINC01963-201ENST00000562038 TET3O43151 1660 aa8.77□□□□□ -1.01
LINC01963-201ENST00000562038 ARHGAP31Q2M1Z3 1444 aa8.76□□□□□ -1.01
LINC01963-201ENST00000562038 NLRP1Q9C000 1473 aa8.76□□□□□ -1.01
LINC01963-201ENST00000562038 RPRD2Q5VT52 1461 aaKnown RBP8.76□□□□□ -1.01
LINC01963-201ENST00000562038 DHX29Q7Z478 1369 aaKnown RBP8.75□□□□□ -1.01
LINC01963-201ENST00000562038 ARHGAP23Q9P227 1491 aa8.75□□□□□ -1.01
LINC01963-201ENST00000562038 CFDP1Q9UEE9 299 aaPredicted RBP8.74□□□□□ -1.01
LINC01963-201ENST00000562038 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
LINC01963-201ENST00000562038 HFM1A2PYH4 1435 aa8.72□□□□□ -1.01
LINC01963-201ENST00000562038 NCOA3Q9Y6Q9 1424 aa8.72□□□□□ -1.01
LINC01963-201ENST00000562038 SETBP1Q9Y6X0 1596 aa8.72□□□□□ -1.01
LINC01963-201ENST00000562038 PCDH10Q9P2E7 1040 aa8.72□□□□□ -1.01
LINC01963-201ENST00000562038 ANKRD30AQ9BXX3 1397 aa8.72□□□□□ -1.01
LINC01963-201ENST00000562038 SLIT1O75093 1534 aa8.72□□□□□ -1.01
LINC01963-201ENST00000562038 HRCP23327 699 aa8.71□□□□□ -1.01
LINC01963-201ENST00000562038 POTEAQ6S8J7 498 aa8.71□□□□□ -1.01
LINC01963-201ENST00000562038 KANK4Q5T7N3 995 aaPredicted RBP8.71□□□□□ -1.01
LINC01963-201ENST00000562038 PIK3C2BO00750 1634 aa8.71□□□□□ -1.02
LINC01963-201ENST00000562038 EFCAB6Q5THR3 1501 aa8.71□□□□□ -1.02
LINC01963-201ENST00000562038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
LINC01963-201ENST00000562038 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
LINC01963-201ENST00000562038 NKTRP30414 1462 aaKnown RBP8.7□□□□□ -1.02
LINC01963-201ENST00000562038 PZPP20742 1482 aa8.7□□□□□ -1.02
LINC01963-201ENST00000562038 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
LINC01963-201ENST00000562038 SPAG9O60271 1321 aaKnown RBP8.68□□□□□ -1.02
LINC01963-201ENST00000562038 UBR1Q8IWV7 1749 aa8.68□□□□□ -1.02
LINC01963-201ENST00000562038 BCL9LQ86UU0 1499 aa8.68□□□□□ -1.02
LINC01963-201ENST00000562038 COL22A1Q8NFW1 1626 aaPredicted RBP8.68□□□□□ -1.02
LINC01963-201ENST00000562038 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
LINC01963-201ENST00000562038 CEP152O94986 1710 aa8.67□□□□□ -1.02
LINC01963-201ENST00000562038 SPATA31A6Q5VVP1 1343 aa8.67□□□□□ -1.02
LINC01963-201ENST00000562038 CCDC125Q86Z20 511 aa8.67□□□□□ -1.02
LINC01963-201ENST00000562038 ARID4BQ4LE39 1312 aaPredicted RBP8.66□□□□□ -1.02
LINC01963-201ENST00000562038 NPHP4O75161 1426 aaPredicted RBP8.66□□□□□ -1.02
LINC01963-201ENST00000562038 UGGT1Q9NYU2 1555 aa8.65□□□□□ -1.02
LINC01963-201ENST00000562038 KIF15Q9NS87 1388 aa8.64□□□□□ -1.03
LINC01963-201ENST00000562038 JCADQ9P266 1359 aa8.64□□□□□ -1.03
LINC01963-201ENST00000562038 TIMELESSQ9UNS1 1208 aa8.64□□□□□ -1.03
LINC01963-201ENST00000562038 LRP6O75581 1613 aa8.64□□□□□ -1.03
LINC01963-201ENST00000562038 SLC34A2O95436 690 aa8.64□□□□□ -1.03
LINC01963-201ENST00000562038 E9PCH4 1651 aa8.64□□□□□ -1.03
LINC01963-201ENST00000562038 TRPM2O94759 1503 aa8.63□□□□□ -1.03
LINC01963-201ENST00000562038 NAIPQ13075 1403 aa8.63□□□□□ -1.03
LINC01963-201ENST00000562038 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
LINC01963-201ENST00000562038 ZNF772Q68DY9 489 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms