RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 NPATQ14207 1427 aa28.69■■■□□ 2.18
PKD1-223ENST00000561668 DNMT1P26358 1616 aaKnown RBP28.69■■■□□ 2.18
PKD1-223ENST00000561668 DUOX2Q9NRD8 1548 aa28.68■■■□□ 2.18
PKD1-223ENST00000561668 ANKRD30AQ9BXX3 1397 aa28.67■■■□□ 2.18
PKD1-223ENST00000561668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.67■■■□□ 2.18
PKD1-223ENST00000561668 KIF15Q9NS87 1388 aa28.67■■■□□ 2.18
PKD1-223ENST00000561668 CROCC2H7BZ55 1655 aa28.66■■■□□ 2.18
PKD1-223ENST00000561668 KDM5DQ9BY66 1539 aa28.62■■■□□ 2.17
PKD1-223ENST00000561668 FAM135AQ9P2D6 1515 aa28.62■■■□□ 2.17
PKD1-223ENST00000561668 EIF2AK4Q9P2K8 1649 aaKnown RBP28.61■■■□□ 2.17
PKD1-223ENST00000561668 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
PKD1-223ENST00000561668 DMRT2Q9Y5R5 561 aa28.6■■■□□ 2.17
PKD1-223ENST00000561668 RRBP1Q9P2E9 1410 aaKnown RBP28.59■■■□□ 2.17
PKD1-223ENST00000561668 ERBINQ96RT1 1412 aa28.58■■■□□ 2.17
PKD1-223ENST00000561668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.57■■■□□ 2.16
PKD1-223ENST00000561668 NCOA1Q15788 1441 aa28.56■■■□□ 2.16
PKD1-223ENST00000561668 RNF17Q9BXT8 1623 aaKnown RBP28.55■■■□□ 2.16
PKD1-223ENST00000561668 FBXO31Q5XUX0 539 aaPredicted RBP28.55■■■□□ 2.16
PKD1-223ENST00000561668 ADGRL2O95490 1459 aa28.53■■■□□ 2.16
PKD1-223ENST00000561668 KANK1Q14678 1352 aa28.52■■■□□ 2.16
PKD1-223ENST00000561668 PZPP20742 1482 aa28.52■■■□□ 2.16
PKD1-223ENST00000561668 ITGAEP38570 1179 aa28.51■■■□□ 2.15
PKD1-223ENST00000561668 TNRQ92752 1358 aa28.5■■■□□ 2.15
PKD1-223ENST00000561668 ABCC3O15438 1527 aa28.48■■■□□ 2.15
PKD1-223ENST00000561668 ZC3H13Q5T200 1668 aaKnown RBP28.48■■■□□ 2.15
PKD1-223ENST00000561668 MYO3AQ8NEV4 1616 aa28.45■■■□□ 2.14
PKD1-223ENST00000561668 MROH1Q8NDA8 1641 aa28.43■■■□□ 2.14
PKD1-223ENST00000561668 ANKRD50Q9ULJ7 1429 aa28.43■■■□□ 2.14
PKD1-223ENST00000561668 CEP170BQ9Y4F5 1589 aaPredicted RBP28.42■■■□□ 2.14
PKD1-223ENST00000561668 ROCK1Q13464 1354 aa28.42■■■□□ 2.14
PKD1-223ENST00000561668 STRCQ7RTU9 1775 aa28.42■■■□□ 2.14
PKD1-223ENST00000561668 CAMSAP1Q5T5Y3 1602 aa28.41■■■□□ 2.14
PKD1-223ENST00000561668 A2ML1A8K2U0 1454 aa28.4■■■□□ 2.14
PKD1-223ENST00000561668 PRDM15P57071 1507 aaPredicted RBP28.39■■■□□ 2.14
PKD1-223ENST00000561668 CEP152O94986 1710 aa28.39■■■□□ 2.14
PKD1-223ENST00000561668 THEMISQ8N1K5 641 aaPredicted RBP28.39■■■□□ 2.14
PKD1-223ENST00000561668 ZNF142P52746 1687 aaPredicted RBP28.38■■■□□ 2.13
PKD1-223ENST00000561668 PKD2Q13563 968 aa28.38■■■□□ 2.13
PKD1-223ENST00000561668 NCKAP5LQ9HCH0 1330 aa28.38■■■□□ 2.13
PKD1-223ENST00000561668 DEPDC5O75140 1603 aa28.36■■■□□ 2.13
PKD1-223ENST00000561668 NLRP1Q9C000 1473 aa28.36■■■□□ 2.13
PKD1-223ENST00000561668 PTPRTO14522 1441 aa28.35■■■□□ 2.13
PKD1-223ENST00000561668 ARHGAP31Q2M1Z3 1444 aa28.34■■■□□ 2.13
PKD1-223ENST00000561668 CFAP65Q6ZU64 1925 aaKnown RBP28.33■■■□□ 2.13
PKD1-223ENST00000561668 PLA2R1Q13018 1463 aa28.33■■■□□ 2.13
PKD1-223ENST00000561668 ERVK-7P63135 1459 aa28.32■■■□□ 2.12
PKD1-223ENST00000561668 ILDR1Q86SU0 546 aaPredicted RBP28.31■■■□□ 2.12
PKD1-223ENST00000561668 SPATA31D1Q6ZQQ2 1576 aa28.3■■■□□ 2.12
PKD1-223ENST00000561668 ANKLE2Q86XL3 938 aa28.29■■■□□ 2.12
PKD1-223ENST00000561668 UGGT1Q9NYU2 1555 aa28.28■■■□□ 2.12
PKD1-223ENST00000561668 CERKQ8TCT0 537 aa28.26■■■□□ 2.11
PKD1-223ENST00000561668 LMTK2Q8IWU2 1503 aa28.26■■■□□ 2.11
PKD1-223ENST00000561668 STAG3Q9UJ98 1225 aa28.25■■■□□ 2.11
PKD1-223ENST00000561668 VWDEQ8N2E2 1590 aa28.24■■■□□ 2.11
PKD1-223ENST00000561668 FBXO41Q8TF61 875 aa28.23■■■□□ 2.11
PKD1-223ENST00000561668 NUP155O75694 1391 aa28.18■■■□□ 2.1
PKD1-223ENST00000561668 EFCAB6Q5THR3 1501 aa28.17■■■□□ 2.1
PKD1-223ENST00000561668 SLC52A1Q9NWF4 448 aa28.16■■■□□ 2.1
PKD1-223ENST00000561668 NAIPQ13075 1403 aa28.16■■■□□ 2.1
PKD1-223ENST00000561668 IDI1Q13907 227 aa28.15■■■□□ 2.1
PKD1-223ENST00000561668 UNC13BO14795 1591 aa28.15■■■□□ 2.1
PKD1-223ENST00000561668 RPRD2Q5VT52 1461 aaKnown RBP28.15■■■□□ 2.1
PKD1-223ENST00000561668 HFM1A2PYH4 1435 aa28.13■■■□□ 2.09
PKD1-223ENST00000561668 EID1Q9Y6B2 187 aa28.13■■■□□ 2.09
PKD1-223ENST00000561668 TET3O43151 1660 aa28.12■■■□□ 2.09
PKD1-223ENST00000561668 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
PKD1-223ENST00000561668 TXNDC2Q86VQ3 553 aa28.1■■■□□ 2.09
PKD1-223ENST00000561668 NOS1P29475 1434 aa28.09■■■□□ 2.09
PKD1-223ENST00000561668 UBR1Q8IWV7 1749 aa28.09■■■□□ 2.09
PKD1-223ENST00000561668 ZNF335Q9H4Z2 1342 aaPredicted RBP28.09■■■□□ 2.09
PKD1-223ENST00000561668 GCC2Q8IWJ2 1684 aa28.09■■■□□ 2.09
PKD1-223ENST00000561668 NPHP4O75161 1426 aaPredicted RBP28.07■■■□□ 2.08
PKD1-223ENST00000561668 PIK3C2BO00750 1634 aa28.06■■■□□ 2.08
PKD1-223ENST00000561668 IQGAP3Q86VI3 1631 aa28.06■■■□□ 2.08
PKD1-223ENST00000561668 MED14O60244 1454 aa28.04■■■□□ 2.08
PKD1-223ENST00000561668 TRIM52Q96A61 297 aa28.04■■■□□ 2.08
PKD1-223ENST00000561668 SYNMO15061 1565 aa28.03■■■□□ 2.08
PKD1-223ENST00000561668 NEURL4Q96JN8 1562 aa28.03■■■□□ 2.08
PKD1-223ENST00000561668 LTBP4Q8N2S1 1624 aa28.03■■■□□ 2.08
PKD1-223ENST00000561668 LTKP29376 864 aa28.02■■■□□ 2.08
PKD1-223ENST00000561668 TMEM2Q9UHN6 1383 aa28.01■■■□□ 2.07
PKD1-223ENST00000561668 CHGAP10645 457 aaKnown RBP28.01■■■□□ 2.07
PKD1-223ENST00000561668 HDGFP51858 240 aaKnown RBP28.01■■■□□ 2.07
PKD1-223ENST00000561668 SCAF11Q99590 1463 aaKnown RBP28.01■■■□□ 2.07
PKD1-223ENST00000561668 SLIT1O75093 1534 aa28■■■□□ 2.07
PKD1-223ENST00000561668 E9PCH4 1651 aa27.99■■■□□ 2.07
PKD1-223ENST00000561668 KDM5AP29375 1690 aaKnown RBP27.99■■■□□ 2.07
PKD1-223ENST00000561668 ARHGAP23Q9P227 1491 aa27.98■■■□□ 2.07
PKD1-223ENST00000561668 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
PKD1-223ENST00000561668 BCANQ96GW7 911 aa27.95■■■□□ 2.06
PKD1-223ENST00000561668 ADGRB3O60242 1522 aa27.93■■■□□ 2.06
PKD1-223ENST00000561668 IQSEC2Q5JU85 1478 aa27.93■■■□□ 2.06
PKD1-223ENST00000561668 PPP1R15AO75807 674 aaPredicted RBP27.91■■■□□ 2.06
PKD1-223ENST00000561668 SLC4A1APQ9BWU0 796 aaKnown RBP27.9■■■□□ 2.06
PKD1-223ENST00000561668 ACIN1Q9UKV3 1341 aaKnown RBP27.9■■■□□ 2.06
PKD1-223ENST00000561668 CPS1P31327 1500 aa27.88■■■□□ 2.05
PKD1-223ENST00000561668 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.88■■■□□ 2.05
PKD1-223ENST00000561668 SETD5Q9C0A6 1442 aa27.88■■■□□ 2.05
PKD1-223ENST00000561668 UBAP1LF5GYI3 381 aa27.85■■■□□ 2.05
PKD1-223ENST00000561668 TMEM131LA2VDJ0 1609 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms