RNA–Protein interactions for RNA: ENST00000561335.2

AC090888.1-201, humanhuman

BASIC

Gene AC090888.1, Length 1,141 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.1-201ENST00000561335 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
AC090888.1-201ENST00000561335 EPAS1Q99814 870 aa11.65□□□□□ -0.54
AC090888.1-201ENST00000561335 PPP1R3GB7ZBB8 358 aa11.64□□□□□ -0.55
AC090888.1-201ENST00000561335 Q6ZNB5 142 aa11.64□□□□□ -0.55
AC090888.1-201ENST00000561335 MRPL50Q8N5N7 158 aaKnown RBP11.64□□□□□ -0.55
AC090888.1-201ENST00000561335 NBPF3Q9H094 633 aa11.64□□□□□ -0.55
AC090888.1-201ENST00000561335 BHMG1C9JSJ3 638 aaPredicted RBP11.61□□□□□ -0.55
AC090888.1-201ENST00000561335 E2F4Q16254 413 aa11.61□□□□□ -0.55
AC090888.1-201ENST00000561335 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
AC090888.1-201ENST00000561335 PTPN5P54829 565 aa11.58□□□□□ -0.56
AC090888.1-201ENST00000561335 DDX12PQ92771 950 aa11.58□□□□□ -0.56
AC090888.1-201ENST00000561335 A0A0G2JS52 829 aa11.57□□□□□ -0.56
AC090888.1-201ENST00000561335 WNT2BQ93097 391 aa11.57□□□□□ -0.56
AC090888.1-201ENST00000561335 RABGEF1Q9UJ41 708 aa11.57□□□□□ -0.56
AC090888.1-201ENST00000561335 COL9A1P20849 921 aa11.56□□□□□ -0.56
AC090888.1-201ENST00000561335 PDIA6Q15084 440 aa11.56□□□□□ -0.56
AC090888.1-201ENST00000561335 C6orf132Q5T0Z8 1188 aa11.56□□□□□ -0.56
AC090888.1-201ENST00000561335 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
AC090888.1-201ENST00000561335 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
AC090888.1-201ENST00000561335 NBR1Q14596 966 aa11.54□□□□□ -0.56
AC090888.1-201ENST00000561335 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
AC090888.1-201ENST00000561335 THSD4Q6ZMP0 1018 aa11.53□□□□□ -0.56
AC090888.1-201ENST00000561335 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
AC090888.1-201ENST00000561335 MAP3K7O43318 606 aa11.5□□□□□ -0.57
AC090888.1-201ENST00000561335 LAPTM4BQ86VI4 370 aa11.5□□□□□ -0.57
AC090888.1-201ENST00000561335 ANKK1Q8NFD2 765 aa11.5□□□□□ -0.57
AC090888.1-201ENST00000561335 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
AC090888.1-201ENST00000561335 LCE2BO14633 110 aa11.49□□□□□ -0.57
AC090888.1-201ENST00000561335 EN1Q05925 392 aaPredicted RBP11.49□□□□□ -0.57
AC090888.1-201ENST00000561335 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
AC090888.1-201ENST00000561335 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
AC090888.1-201ENST00000561335 GRXCR2A6NFK2 248 aa11.46□□□□□ -0.57
AC090888.1-201ENST00000561335 PLCB2Q00722 1185 aa11.46□□□□□ -0.57
AC090888.1-201ENST00000561335 TSHZ2Q9NRE2 1034 aa11.45□□□□□ -0.58
AC090888.1-201ENST00000561335 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
AC090888.1-201ENST00000561335 PACS2Q86VP3 889 aa11.43□□□□□ -0.58
AC090888.1-201ENST00000561335 CERKQ8TCT0 537 aa11.42□□□□□ -0.58
AC090888.1-201ENST00000561335 ZFRQ96KR1 1074 aaKnown RBP11.42□□□□□ -0.58
AC090888.1-201ENST00000561335 SEPT9Q9UHD8 586 aaPredicted RBP11.42□□□□□ -0.58
AC090888.1-201ENST00000561335 SOWAHBA6NEL2 793 aa11.4□□□□□ -0.58
AC090888.1-201ENST00000561335 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.58
AC090888.1-201ENST00000561335 BCAMP50895 628 aa11.38□□□□□ -0.59
AC090888.1-201ENST00000561335 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
AC090888.1-201ENST00000561335 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
AC090888.1-201ENST00000561335 TSKSQ9UJT2 592 aa11.36□□□□□ -0.59
AC090888.1-201ENST00000561335 PRSS12P56730 875 aa11.35□□□□□ -0.59
AC090888.1-201ENST00000561335 LRCH3Q96II8 777 aa11.35□□□□□ -0.59
AC090888.1-201ENST00000561335 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.35□□□□□ -0.59
AC090888.1-201ENST00000561335 OSBPP22059 807 aa11.34□□□□□ -0.59
AC090888.1-201ENST00000561335 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
AC090888.1-201ENST00000561335 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
AC090888.1-201ENST00000561335 TRAF7Q6Q0C0 670 aa11.32□□□□□ -0.6
AC090888.1-201ENST00000561335 TSR3Q9UJK0 312 aaKnown RBP11.31□□□□□ -0.6
AC090888.1-201ENST00000561335 PRIM1P49642 420 aaKnown RBP11.3□□□□□ -0.6
AC090888.1-201ENST00000561335 HAP1P54257 671 aaPredicted RBP11.3□□□□□ -0.6
AC090888.1-201ENST00000561335 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
AC090888.1-201ENST00000561335 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
AC090888.1-201ENST00000561335 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
AC090888.1-201ENST00000561335 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
AC090888.1-201ENST00000561335 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
AC090888.1-201ENST00000561335 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
AC090888.1-201ENST00000561335 TATDN2Q93075 761 aa11.28□□□□□ -0.6
AC090888.1-201ENST00000561335 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
AC090888.1-201ENST00000561335 SMAPO00193 183 aa11.27□□□□□ -0.61
AC090888.1-201ENST00000561335 KCNV2Q8TDN2 545 aa11.27□□□□□ -0.61
AC090888.1-201ENST00000561335 PPP4CP60510 307 aa11.26□□□□□ -0.61
AC090888.1-201ENST00000561335 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
AC090888.1-201ENST00000561335 SAMD7Q7Z3H4 446 aa11.24□□□□□ -0.61
AC090888.1-201ENST00000561335 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
AC090888.1-201ENST00000561335 KCNC4Q03721 635 aa11.23□□□□□ -0.61
AC090888.1-201ENST00000561335 NUDT18Q6ZVK8 323 aa11.23□□□□□ -0.61
AC090888.1-201ENST00000561335 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
AC090888.1-201ENST00000561335 LAPTM4AQ15012 233 aa11.2□□□□□ -0.62
AC090888.1-201ENST00000561335 PADI6Q6TGC4 694 aa11.2□□□□□ -0.62
AC090888.1-201ENST00000561335 ZNF775Q96BV0 537 aaPredicted RBP11.2□□□□□ -0.62
AC090888.1-201ENST00000561335 RNF40O75150 1001 aa11.19□□□□□ -0.62
AC090888.1-201ENST00000561335 NECTIN2Q92692 538 aa11.19□□□□□ -0.62
AC090888.1-201ENST00000561335 NPDC1Q9NQX5 325 aaPredicted RBP11.19□□□□□ -0.62
AC090888.1-201ENST00000561335 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
AC090888.1-201ENST00000561335 C3orf80F5H4A9 247 aa11.16□□□□□ -0.62
AC090888.1-201ENST00000561335 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
AC090888.1-201ENST00000561335 GFRA3O60609 400 aa11.14□□□□□ -0.63
AC090888.1-201ENST00000561335 ZNF787Q6DD87 383 aa11.14□□□□□ -0.63
AC090888.1-201ENST00000561335 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
AC090888.1-201ENST00000561335 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
AC090888.1-201ENST00000561335 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
AC090888.1-201ENST00000561335 PTGDRQ13258 359 aa11.11□□□□□ -0.63
AC090888.1-201ENST00000561335 SWT1Q5T5J6 900 aaKnown RBP11.1□□□□□ -0.63
AC090888.1-201ENST00000561335 SEMA3EO15041 775 aa11.09□□□□□ -0.63
AC090888.1-201ENST00000561335 VSIG10Q8N0Z9 540 aa11.09□□□□□ -0.63
AC090888.1-201ENST00000561335 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
AC090888.1-201ENST00000561335 SMYD5Q6GMV2 418 aa11.08□□□□□ -0.64
AC090888.1-201ENST00000561335 EYA1Q99502 592 aa11.08□□□□□ -0.64
AC090888.1-201ENST00000561335 IL21Q9HBE4 155 aa11.08□□□□□ -0.64
AC090888.1-201ENST00000561335 LOC100996750A0A140TA64 210 aa11.07□□□□□ -0.64
AC090888.1-201ENST00000561335 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
AC090888.1-201ENST00000561335 MTRQ99707 1265 aa11.07□□□□□ -0.64
AC090888.1-201ENST00000561335 KRTAP4-6Q9BYQ5 205 aa11.07□□□□□ -0.64
AC090888.1-201ENST00000561335 FCHSD2O94868 740 aa11.06□□□□□ -0.64
AC090888.1-201ENST00000561335 DNAJB2P25686 324 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms