RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 RIMS1Q86UR5 1692 aaKnown RBP13.72□□□□□ -0.21
SEMA4B-214ENST00000560003 DUOX2Q9NRD8 1548 aa13.71□□□□□ -0.21
SEMA4B-214ENST00000560003 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
SEMA4B-214ENST00000560003 NPATQ14207 1427 aa13.7□□□□□ -0.22
SEMA4B-214ENST00000560003 NCOA1Q15788 1441 aa13.7□□□□□ -0.22
SEMA4B-214ENST00000560003 FER1L4A9Z1Z3 1794 aa13.7□□□□□ -0.22
SEMA4B-214ENST00000560003 KANK1Q14678 1352 aa13.7□□□□□ -0.22
SEMA4B-214ENST00000560003 ERBINQ96RT1 1412 aa13.69□□□□□ -0.22
SEMA4B-214ENST00000560003 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
SEMA4B-214ENST00000560003 UHRF1BP1Q6BDS2 1440 aa13.68□□□□□ -0.22
SEMA4B-214ENST00000560003 ITGAEP38570 1179 aa13.68□□□□□ -0.22
SEMA4B-214ENST00000560003 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
SEMA4B-214ENST00000560003 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-214ENST00000560003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
SEMA4B-214ENST00000560003 ROCK1Q13464 1354 aa13.67□□□□□ -0.22
SEMA4B-214ENST00000560003 ADGRL2O95490 1459 aa13.65□□□□□ -0.22
SEMA4B-214ENST00000560003 HSPA2P54652 639 aa13.64□□□□□ -0.23
SEMA4B-214ENST00000560003 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
SEMA4B-214ENST00000560003 LMTK3Q96Q04 1460 aa13.63□□□□□ -0.23
SEMA4B-214ENST00000560003 SETD1BQ9UPS6 1966 aaKnown RBP13.63□□□□□ -0.23
SEMA4B-214ENST00000560003 KDM5DQ9BY66 1539 aa13.63□□□□□ -0.23
SEMA4B-214ENST00000560003 PTPRKQ15262 1439 aa13.63□□□□□ -0.23
SEMA4B-214ENST00000560003 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
SEMA4B-214ENST00000560003 ANKRD50Q9ULJ7 1429 aa13.63□□□□□ -0.23
SEMA4B-214ENST00000560003 EIF2AK4Q9P2K8 1649 aaKnown RBP13.62□□□□□ -0.23
SEMA4B-214ENST00000560003 MROH2AA6NES4 1674 aa13.62□□□□□ -0.23
SEMA4B-214ENST00000560003 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
SEMA4B-214ENST00000560003 TNRQ92752 1358 aa13.6□□□□□ -0.23
SEMA4B-214ENST00000560003 THEMISQ8N1K5 641 aaPredicted RBP13.6□□□□□ -0.23
SEMA4B-214ENST00000560003 PZPP20742 1482 aa13.6□□□□□ -0.23
SEMA4B-214ENST00000560003 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
SEMA4B-214ENST00000560003 C3P01024 1663 aa13.59□□□□□ -0.23
SEMA4B-214ENST00000560003 CLTCQ00610 1675 aaKnown RBP13.58□□□□□ -0.24
SEMA4B-214ENST00000560003 ACIN1Q9UKV3 1341 aaKnown RBP13.58□□□□□ -0.24
SEMA4B-214ENST00000560003 RNF17Q9BXT8 1623 aaKnown RBP13.57□□□□□ -0.24
SEMA4B-214ENST00000560003 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
SEMA4B-214ENST00000560003 PKD2Q13563 968 aa13.57□□□□□ -0.24
SEMA4B-214ENST00000560003 ABCC3O15438 1527 aa13.56□□□□□ -0.24
SEMA4B-214ENST00000560003 PREX1Q8TCU6 1659 aa13.56□□□□□ -0.24
SEMA4B-214ENST00000560003 NLRP1Q9C000 1473 aa13.55□□□□□ -0.24
SEMA4B-214ENST00000560003 ANKLE2Q86XL3 938 aa13.54□□□□□ -0.24
SEMA4B-214ENST00000560003 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
SEMA4B-214ENST00000560003 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
SEMA4B-214ENST00000560003 NUP155O75694 1391 aa13.53□□□□□ -0.24
SEMA4B-214ENST00000560003 A2ML1A8K2U0 1454 aa13.53□□□□□ -0.24
SEMA4B-214ENST00000560003 PRDM15P57071 1507 aaPredicted RBP13.53□□□□□ -0.24
SEMA4B-214ENST00000560003 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
SEMA4B-214ENST00000560003 LMTK2Q8IWU2 1503 aa13.51□□□□□ -0.25
SEMA4B-214ENST00000560003 MSH5O43196 834 aa13.51□□□□□ -0.25
SEMA4B-214ENST00000560003 HDGFP51858 240 aaKnown RBP13.5□□□□□ -0.25
SEMA4B-214ENST00000560003 ERVK-7P63135 1459 aa13.49□□□□□ -0.25
SEMA4B-214ENST00000560003 PTPRTO14522 1441 aa13.49□□□□□ -0.25
SEMA4B-214ENST00000560003 NCKAP5LQ9HCH0 1330 aa13.49□□□□□ -0.25
SEMA4B-214ENST00000560003 TRIM52Q96A61 297 aa13.49□□□□□ -0.25
SEMA4B-214ENST00000560003 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
SEMA4B-214ENST00000560003 DEPDC5O75140 1603 aa13.49□□□□□ -0.25
SEMA4B-214ENST00000560003 MROH1Q8NDA8 1641 aa13.49□□□□□ -0.25
SEMA4B-214ENST00000560003 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
SEMA4B-214ENST00000560003 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
SEMA4B-214ENST00000560003 SPATA31D1Q6ZQQ2 1576 aa13.47□□□□□ -0.25
SEMA4B-214ENST00000560003 CEP170BQ9Y4F5 1589 aaPredicted RBP13.47□□□□□ -0.25
SEMA4B-214ENST00000560003 IDI1Q13907 227 aa13.47□□□□□ -0.25
SEMA4B-214ENST00000560003 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
SEMA4B-214ENST00000560003 NAIPQ13075 1403 aa13.47□□□□□ -0.25
SEMA4B-214ENST00000560003 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.25
SEMA4B-214ENST00000560003 CAMSAP1Q5T5Y3 1602 aa13.46□□□□□ -0.26
SEMA4B-214ENST00000560003 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
SEMA4B-214ENST00000560003 MYO3AQ8NEV4 1616 aa13.44□□□□□ -0.26
SEMA4B-214ENST00000560003 TXNDC2Q86VQ3 553 aa13.44□□□□□ -0.26
SEMA4B-214ENST00000560003 NOS1P29475 1434 aa13.43□□□□□ -0.26
SEMA4B-214ENST00000560003 EFCAB6Q5THR3 1501 aa13.42□□□□□ -0.26
SEMA4B-214ENST00000560003 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
SEMA4B-214ENST00000560003 CERKQ8TCT0 537 aa13.41□□□□□ -0.26
SEMA4B-214ENST00000560003 UNC13BO14795 1591 aa13.41□□□□□ -0.26
SEMA4B-214ENST00000560003 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
SEMA4B-214ENST00000560003 CEP152O94986 1710 aa13.4□□□□□ -0.26
SEMA4B-214ENST00000560003 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
SEMA4B-214ENST00000560003 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEMA4B-214ENST00000560003 HRCP23327 699 aa13.39□□□□□ -0.27
SEMA4B-214ENST00000560003 TMEM2Q9UHN6 1383 aa13.39□□□□□ -0.27
SEMA4B-214ENST00000560003 SETD5Q9C0A6 1442 aa13.39□□□□□ -0.27
SEMA4B-214ENST00000560003 TET3O43151 1660 aa13.38□□□□□ -0.27
SEMA4B-214ENST00000560003 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
SEMA4B-214ENST00000560003 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
SEMA4B-214ENST00000560003 BCANQ96GW7 911 aa13.37□□□□□ -0.27
SEMA4B-214ENST00000560003 IQGAP3Q86VI3 1631 aa13.37□□□□□ -0.27
SEMA4B-214ENST00000560003 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
SEMA4B-214ENST00000560003 NPHP4O75161 1426 aaPredicted RBP13.37□□□□□ -0.27
SEMA4B-214ENST00000560003 LTKP29376 864 aa13.36□□□□□ -0.27
SEMA4B-214ENST00000560003 MPHOSPH9Q99550 1183 aa13.36□□□□□ -0.27
SEMA4B-214ENST00000560003 MED14O60244 1454 aa13.36□□□□□ -0.27
SEMA4B-214ENST00000560003 SCAF11Q99590 1463 aaKnown RBP13.35□□□□□ -0.27
SEMA4B-214ENST00000560003 SLIT1O75093 1534 aa13.34□□□□□ -0.27
SEMA4B-214ENST00000560003 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
SEMA4B-214ENST00000560003 ARHGAP23Q9P227 1491 aa13.33□□□□□ -0.28
SEMA4B-214ENST00000560003 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
SEMA4B-214ENST00000560003 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
SEMA4B-214ENST00000560003 CFAP65Q6ZU64 1925 aaKnown RBP13.32□□□□□ -0.28
SEMA4B-214ENST00000560003 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
SEMA4B-214ENST00000560003 SYNMO15061 1565 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms