RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
TPM1-221ENST00000559831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.061e-6■■■□□ 19
TPM1-221ENST00000559831 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
TPM1-221ENST00000559831 ACIN1Q9UKV3 1341 aaKnown RBP15.42■□□□□ 0.06
TPM1-221ENST00000559831 NUP155O75694 1391 aa15.41■□□□□ 0.06
TPM1-221ENST00000559831 DHX57Q6P158 1386 aaKnown RBP15.4■□□□□ 0.06
TPM1-221ENST00000559831 IQGAP3Q86VI3 1631 aa15.4■□□□□ 0.06
TPM1-221ENST00000559831 MROH1Q8NDA8 1641 aa15.4■□□□□ 0.06
TPM1-221ENST00000559831 KDM5DQ9BY66 1539 aa15.4■□□□□ 0.06
TPM1-221ENST00000559831 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
TPM1-221ENST00000559831 CEP152O94986 1710 aa15.39■□□□□ 0.05
TPM1-221ENST00000559831 PZPP20742 1482 aa15.39■□□□□ 0.05
TPM1-221ENST00000559831 AGLP35573 1532 aa15.38■□□□□ 0.05
TPM1-221ENST00000559831 PRDM15P57071 1507 aaPredicted RBP15.38■□□□□ 0.05
TPM1-221ENST00000559831 GGT6Q6P531 493 aa15.38■□□□□ 0.05
TPM1-221ENST00000559831 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
TPM1-221ENST00000559831 KANK1Q14678 1352 aa15.37■□□□□ 0.05
TPM1-221ENST00000559831 ARID4BQ4LE39 1312 aaPredicted RBP15.37■□□□□ 0.05
TPM1-221ENST00000559831 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
TPM1-221ENST00000559831 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
TPM1-221ENST00000559831 MLECQ14165 292 aa15.35■□□□□ 0.05
TPM1-221ENST00000559831 VWDEQ8N2E2 1590 aa15.34■□□□□ 0.05
TPM1-221ENST00000559831 TET3O43151 1660 aa15.34■□□□□ 0.05
TPM1-221ENST00000559831 ZC3H13Q5T200 1668 aaKnown RBP15.33■□□□□ 0.04
TPM1-221ENST00000559831 PKD2Q13563 968 aa15.31■□□□□ 0.04
TPM1-221ENST00000559831 FOXD1Q16676 465 aa15.31■□□□□ 0.04
TPM1-221ENST00000559831 ABCC3O15438 1527 aa15.31■□□□□ 0.04
TPM1-221ENST00000559831 CAMSAP1Q5T5Y3 1602 aa15.31■□□□□ 0.04
TPM1-221ENST00000559831 E9PCH4 1651 aa15.31■□□□□ 0.04
TPM1-221ENST00000559831 CLTCQ00610 1675 aaKnown RBP15.31■□□□□ 0.04
TPM1-221ENST00000559831 CFAP65Q6ZU64 1925 aaKnown RBP15.31■□□□□ 0.04
TPM1-221ENST00000559831 WASHC2CQ9Y4E1 1318 aa15.3■□□□□ 0.04
TPM1-221ENST00000559831 LMTK2Q8IWU2 1503 aa15.28■□□□□ 0.04
TPM1-221ENST00000559831 FER1L4A9Z1Z3 1794 aa15.28■□□□□ 0.04
TPM1-221ENST00000559831 EFCAB6Q5THR3 1501 aa15.27■□□□□ 0.04
TPM1-221ENST00000559831 ESF1Q9H501 851 aaKnown RBP15.26■□□□□ 0.03
TPM1-221ENST00000559831 SPHKAPQ2M3C7 1700 aa15.26■□□□□ 0.03
TPM1-221ENST00000559831 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
TPM1-221ENST00000559831 CLSPNQ9HAW4 1339 aa15.23■□□□□ 0.03
TPM1-221ENST00000559831 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
TPM1-221ENST00000559831 MROH2AA6NES4 1674 aa15.22■□□□□ 0.03
TPM1-221ENST00000559831 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
TPM1-221ENST00000559831 NPATQ14207 1427 aa15.21■□□□□ 0.03
TPM1-221ENST00000559831 NEUROD1Q13562 356 aa15.21■□□□□ 0.03
TPM1-221ENST00000559831 SIN3AQ96ST3 1273 aa15.21■□□□□ 0.03
TPM1-221ENST00000559831 RIMS1Q86UR5 1692 aaKnown RBP15.21■□□□□ 0.03
TPM1-221ENST00000559831 PREX1Q8TCU6 1659 aa15.2■□□□□ 0.02
TPM1-221ENST00000559831 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
TPM1-221ENST00000559831 ADAMTSL3P82987 1691 aa15.19■□□□□ 0.02
TPM1-221ENST00000559831 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
TPM1-221ENST00000559831 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
TPM1-221ENST00000559831 TRPM2O94759 1503 aa15.17■□□□□ 0.02
TPM1-221ENST00000559831 C3P01024 1663 aa15.17■□□□□ 0.02
TPM1-221ENST00000559831 PLA2R1Q13018 1463 aa15.17■□□□□ 0.02
TPM1-221ENST00000559831 ZMYM3Q14202 1370 aa15.16■□□□□ 0.02
TPM1-221ENST00000559831 CLTCL1P53675 1640 aa15.16■□□□□ 0.02
TPM1-221ENST00000559831 CCDC144AA2RUR9 1427 aa15.16■□□□□ 0.02
TPM1-221ENST00000559831 PTPRTO14522 1441 aa15.16■□□□□ 0.02
TPM1-221ENST00000559831 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
TPM1-221ENST00000559831 KIF1BO60333 1816 aa15.15■□□□□ 0.02
TPM1-221ENST00000559831 SYNMO15061 1565 aa15.15■□□□□ 0.02
TPM1-221ENST00000559831 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
TPM1-221ENST00000559831 ERVK-7P63135 1459 aa15.14■□□□□ 0.01
TPM1-221ENST00000559831 NOS1P29475 1434 aa15.13■□□□□ 0.01
TPM1-221ENST00000559831 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
TPM1-221ENST00000559831 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
TPM1-221ENST00000559831 SPATA31D1Q6ZQQ2 1576 aa15.11■□□□□ 0.01
TPM1-221ENST00000559831 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
TPM1-221ENST00000559831 PIK3C2BO00750 1634 aa15.1■□□□□ 0.01
TPM1-221ENST00000559831 CEBPAP49715 358 aaPredicted RBP15.1■□□□□ 0.01
TPM1-221ENST00000559831 MYO5BQ9ULV0 1848 aa15.08■□□□□ 0.01
TPM1-221ENST00000559831 CHGAP10645 457 aaKnown RBP15.07■□□□□ 0
TPM1-221ENST00000559831 TNRQ92752 1358 aa15.07■□□□□ 0
TPM1-221ENST00000559831 RGL3Q3MIN7 710 aa15.05■□□□□ -0
TPM1-221ENST00000559831 PTPRMP28827 1452 aa15.04■□□□□ -0
TPM1-221ENST00000559831 SLC52A1Q9NWF4 448 aa15.04■□□□□ -0
TPM1-221ENST00000559831 ADGRB3O60242 1522 aa15.03■□□□□ -0
TPM1-221ENST00000559831 IDI1Q13907 227 aa15.03■□□□□ -0
TPM1-221ENST00000559831 L3MBTL2Q969R5 705 aa15.03■□□□□ -0
TPM1-221ENST00000559831 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
TPM1-221ENST00000559831 SPATA31E1Q6ZUB1 1445 aa15.02■□□□□ -0
TPM1-221ENST00000559831 STAG3Q9UJ98 1225 aa15.02■□□□□ -0
TPM1-221ENST00000559831 TIMELESSQ9UNS1 1208 aa15.02■□□□□ -0
TPM1-221ENST00000559831 TMEM131LA2VDJ0 1609 aa15.02□□□□□ -0.01
TPM1-221ENST00000559831 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
TPM1-221ENST00000559831 SETD1BQ9UPS6 1966 aaKnown RBP15.01□□□□□ -0.01
TPM1-221ENST00000559831 NEURL4Q96JN8 1562 aa15.01□□□□□ -0.01
TPM1-221ENST00000559831 IFT172Q9UG01 1749 aa15□□□□□ -0.01
TPM1-221ENST00000559831 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
TPM1-221ENST00000559831 PPLO60437 1756 aa15□□□□□ -0.01
TPM1-221ENST00000559831 NLRP1Q9C000 1473 aa15□□□□□ -0.01
TPM1-221ENST00000559831 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
TPM1-221ENST00000559831 KDM2AQ9Y2K7 1162 aa14.99□□□□□ -0.01
TPM1-221ENST00000559831 DCAF11Q8TEB1 546 aa14.98□□□□□ -0.01
TPM1-221ENST00000559831 KDM5AP29375 1690 aaKnown RBP14.97□□□□□ -0.01
TPM1-221ENST00000559831 PPP1R15AO75807 674 aaPredicted RBP14.96□□□□□ -0.01
TPM1-221ENST00000559831 CEP170BQ9Y4F5 1589 aaPredicted RBP14.96□□□□□ -0.01
TPM1-221ENST00000559831 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
TPM1-221ENST00000559831 A2ML1A8K2U0 1454 aa14.95□□□□□ -0.02
TPM1-221ENST00000559831 NEXMIFQ5QGS0 1516 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms