RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TSPOAP1O95153 1857 aa19.82■□□□□ 0.76
TPM1-215ENST00000558868 KDM5CP41229 1560 aa19.81■□□□□ 0.76
TPM1-215ENST00000558868 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
TPM1-215ENST00000558868 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
TPM1-215ENST00000558868 MLH3Q9UHC1 1453 aa19.8■□□□□ 0.76
TPM1-215ENST00000558868 RPRD2Q5VT52 1461 aaKnown RBP19.79■□□□□ 0.76
TPM1-215ENST00000558868 FOXD1Q16676 465 aa19.79■□□□□ 0.76
TPM1-215ENST00000558868 DHX29Q7Z478 1369 aaKnown RBP19.79■□□□□ 0.76
TPM1-215ENST00000558868 IQGAP3Q86VI3 1631 aa19.79■□□□□ 0.76
TPM1-215ENST00000558868 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
TPM1-215ENST00000558868 EIF2AK4Q9P2K8 1649 aaKnown RBP19.78■□□□□ 0.76
TPM1-215ENST00000558868 KIDINS220Q9ULH0 1771 aa19.77■□□□□ 0.76
TPM1-215ENST00000558868 DISP3Q9P2K9 1392 aa19.76■□□□□ 0.75
TPM1-215ENST00000558868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.751e-6■■■■□ 20.6
TPM1-215ENST00000558868 KANK1Q14678 1352 aa19.74■□□□□ 0.75
TPM1-215ENST00000558868 DEPDC5O75140 1603 aa19.73■□□□□ 0.75
TPM1-215ENST00000558868 A2MP01023 1474 aa19.72■□□□□ 0.75
TPM1-215ENST00000558868 RICTORQ6R327 1708 aa19.69■□□□□ 0.74
TPM1-215ENST00000558868 KIF3BO15066 747 aa19.67■□□□□ 0.74
TPM1-215ENST00000558868 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
TPM1-215ENST00000558868 PPRC1Q5VV67 1664 aaKnown RBP19.66■□□□□ 0.74
TPM1-215ENST00000558868 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
TPM1-215ENST00000558868 PRDM15P57071 1507 aaPredicted RBP19.66■□□□□ 0.74
TPM1-215ENST00000558868 ATP10AO60312 1499 aa19.65■□□□□ 0.74
TPM1-215ENST00000558868 ZMYM4Q5VZL5 1548 aa19.65■□□□□ 0.74
TPM1-215ENST00000558868 VWDEQ8N2E2 1590 aa19.65■□□□□ 0.74
TPM1-215ENST00000558868 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.73
TPM1-215ENST00000558868 ABCA6Q8N139 1617 aa19.64■□□□□ 0.73
TPM1-215ENST00000558868 BCORL1Q5H9F3 1711 aa19.64■□□□□ 0.73
TPM1-215ENST00000558868 TET3O43151 1660 aa19.63■□□□□ 0.73
TPM1-215ENST00000558868 RNF17Q9BXT8 1623 aaKnown RBP19.63■□□□□ 0.73
TPM1-215ENST00000558868 CCDC144AA2RUR9 1427 aa19.63■□□□□ 0.73
TPM1-215ENST00000558868 DIP2CQ9Y2E4 1556 aa19.61■□□□□ 0.73
TPM1-215ENST00000558868 FRMPD1Q5SYB0 1578 aa19.61■□□□□ 0.73
TPM1-215ENST00000558868 MROH1Q8NDA8 1641 aa19.59■□□□□ 0.73
TPM1-215ENST00000558868 LMTK2Q8IWU2 1503 aa19.59■□□□□ 0.73
TPM1-215ENST00000558868 PLA2R1Q13018 1463 aa19.57■□□□□ 0.72
TPM1-215ENST00000558868 E9PCH4 1651 aa19.56■□□□□ 0.72
TPM1-215ENST00000558868 SPATA31D1Q6ZQQ2 1576 aa19.56■□□□□ 0.72
TPM1-215ENST00000558868 PTPRTO14522 1441 aa19.55■□□□□ 0.72
TPM1-215ENST00000558868 TRPM2O94759 1503 aa19.53■□□□□ 0.72
TPM1-215ENST00000558868 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.72
TPM1-215ENST00000558868 YEATS2Q9ULM3 1422 aa19.52■□□□□ 0.72
TPM1-215ENST00000558868 EFCAB6Q5THR3 1501 aa19.52■□□□□ 0.72
TPM1-215ENST00000558868 SPHKAPQ2M3C7 1700 aa19.52■□□□□ 0.72
TPM1-215ENST00000558868 REREQ9P2R6 1566 aa19.52■□□□□ 0.71
TPM1-215ENST00000558868 GGT6Q6P531 493 aa19.5■□□□□ 0.71
TPM1-215ENST00000558868 EIF4G2P78344 907 aaKnown RBP eCLIP19.48■□□□□ 0.71
TPM1-215ENST00000558868 NBPF8Q3BBV2 869 aa19.48■□□□□ 0.71
TPM1-215ENST00000558868 WASHC2CQ9Y4E1 1318 aa19.48■□□□□ 0.71
TPM1-215ENST00000558868 CEP152O94986 1710 aa19.48■□□□□ 0.71
TPM1-215ENST00000558868 ZC3H13Q5T200 1668 aaKnown RBP19.47■□□□□ 0.71
TPM1-215ENST00000558868 STAC3Q96MF2 364 aa19.47■□□□□ 0.71
TPM1-215ENST00000558868 ABCC3O15438 1527 aa19.46■□□□□ 0.71
TPM1-215ENST00000558868 AGLP35573 1532 aa19.46■□□□□ 0.71
TPM1-215ENST00000558868 DCAF11Q8TEB1 546 aa19.46■□□□□ 0.71
TPM1-215ENST00000558868 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
TPM1-215ENST00000558868 NEURL4Q96JN8 1562 aa19.44■□□□□ 0.7
TPM1-215ENST00000558868 ARHGEF40Q8TER5 1519 aa19.43■□□□□ 0.7
TPM1-215ENST00000558868 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
TPM1-215ENST00000558868 RALGAPBQ86X10 1494 aa19.42■□□□□ 0.7
TPM1-215ENST00000558868 CLTCL1P53675 1640 aa19.42■□□□□ 0.7
TPM1-215ENST00000558868 CAMSAP1Q5T5Y3 1602 aa19.42■□□□□ 0.7
TPM1-215ENST00000558868 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
TPM1-215ENST00000558868 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
TPM1-215ENST00000558868 HSPA5P11021 654 aaKnown RBP19.41■□□□□ 0.7
TPM1-215ENST00000558868 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
TPM1-215ENST00000558868 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
TPM1-215ENST00000558868 KDM2AQ9Y2K7 1162 aa19.41■□□□□ 0.7
TPM1-215ENST00000558868 CNTLNQ9NXG0 1405 aa19.41■□□□□ 0.7
TPM1-215ENST00000558868 NPATQ14207 1427 aa19.4■□□□□ 0.7
TPM1-215ENST00000558868 PRAG1Q86YV5 1406 aa19.38■□□□□ 0.69
TPM1-215ENST00000558868 KIF1BO60333 1816 aa19.36■□□□□ 0.69
TPM1-215ENST00000558868 NOS1P29475 1434 aa19.34■□□□□ 0.69
TPM1-215ENST00000558868 HIRIP3Q9BW71 556 aaPredicted RBP19.34■□□□□ 0.69
TPM1-215ENST00000558868 CARD11Q9BXL7 1154 aa19.33■□□□□ 0.68
TPM1-215ENST00000558868 TRPM1Q7Z4N2 1603 aa19.33■□□□□ 0.68
TPM1-215ENST00000558868 ROCK2O75116 1388 aaKnown RBP19.32■□□□□ 0.68
TPM1-215ENST00000558868 USP47Q96K76 1375 aa19.32■□□□□ 0.68
TPM1-215ENST00000558868 LAMC1P11047 1609 aa19.3■□□□□ 0.68
TPM1-215ENST00000558868 SLC52A1Q9NWF4 448 aa19.29■□□□□ 0.68
TPM1-215ENST00000558868 GPRASP1Q5JY77 1395 aa19.29■□□□□ 0.68
TPM1-215ENST00000558868 DDX10Q13206 875 aaKnown RBP19.28■□□□□ 0.68
TPM1-215ENST00000558868 ADGRB3O60242 1522 aa19.28■□□□□ 0.68
TPM1-215ENST00000558868 MYOM2P54296 1465 aa19.28■□□□□ 0.68
TPM1-215ENST00000558868 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.68
TPM1-215ENST00000558868 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.68
TPM1-215ENST00000558868 MIER1Q8N108 512 aa19.27■□□□□ 0.68
TPM1-215ENST00000558868 PIK3C2BO00750 1634 aa19.26■□□□□ 0.67
TPM1-215ENST00000558868 MADDQ8WXG6 1647 aa19.26■□□□□ 0.67
TPM1-215ENST00000558868 ESF1Q9H501 851 aaKnown RBP19.26■□□□□ 0.67
TPM1-215ENST00000558868 ARID4BQ4LE39 1312 aaPredicted RBP19.25■□□□□ 0.67
TPM1-215ENST00000558868 SIGLEC1Q9BZZ2 1709 aa19.25■□□□□ 0.67
TPM1-215ENST00000558868 PREX1Q8TCU6 1659 aa19.25■□□□□ 0.67
TPM1-215ENST00000558868 CFAP65Q6ZU64 1925 aaKnown RBP19.25■□□□□ 0.67
TPM1-215ENST00000558868 SYNMO15061 1565 aa19.24■□□□□ 0.67
TPM1-215ENST00000558868 POLR1AO95602 1720 aaPredicted RBP19.23■□□□□ 0.67
TPM1-215ENST00000558868 CHGAP10645 457 aaKnown RBP19.23■□□□□ 0.67
TPM1-215ENST00000558868 CLTCQ00610 1675 aaKnown RBP19.23■□□□□ 0.67
TPM1-215ENST00000558868 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms