RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ZBED2Q9BTP6 218 aa10.12□□□□□ -0.79
CASC4-206ENST00000558847 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
CASC4-206ENST00000558847 PCDHGA10Q9Y5H3 936 aa10.11□□□□□ -0.79
CASC4-206ENST00000558847 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
CASC4-206ENST00000558847 DPYSL4O14531 572 aa10.09□□□□□ -0.79
CASC4-206ENST00000558847 TYW1BQ6NUM6 668 aa10.09□□□□□ -0.79
CASC4-206ENST00000558847 WNT2BQ93097 391 aa10.08□□□□□ -0.8
CASC4-206ENST00000558847 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
CASC4-206ENST00000558847 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
CASC4-206ENST00000558847 BHMG1C9JSJ3 638 aaPredicted RBP10.07□□□□□ -0.8
CASC4-206ENST00000558847 PHF14O94880 888 aa10.07□□□□□ -0.8
CASC4-206ENST00000558847 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
CASC4-206ENST00000558847 E2F4Q16254 413 aa10.05□□□□□ -0.8
CASC4-206ENST00000558847 KCNV2Q8TDN2 545 aa10.05□□□□□ -0.8
CASC4-206ENST00000558847 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
CASC4-206ENST00000558847 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
CASC4-206ENST00000558847 COL9A1P20849 921 aa10.03□□□□□ -0.8
CASC4-206ENST00000558847 RBM33Q96EV2 1170 aaKnown RBP10.03□□□□□ -0.8
CASC4-206ENST00000558847 EPAS1Q99814 870 aa10.03□□□□□ -0.8
CASC4-206ENST00000558847 DDX12PQ92771 950 aa10.02□□□□□ -0.81
CASC4-206ENST00000558847 RABGEF1Q9UJ41 708 aa10.01□□□□□ -0.81
CASC4-206ENST00000558847 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
CASC4-206ENST00000558847 C6orf132Q5T0Z8 1188 aa10□□□□□ -0.81
CASC4-206ENST00000558847 ANKK1Q8NFD2 765 aa9.99□□□□□ -0.81
CASC4-206ENST00000558847 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
CASC4-206ENST00000558847 KIAA1468Q9P260 1216 aa9.98□□□□□ -0.81
CASC4-206ENST00000558847 NBR1Q14596 966 aa9.96□□□□□ -0.82
CASC4-206ENST00000558847 MAP3K7O43318 606 aa9.94□□□□□ -0.82
CASC4-206ENST00000558847 PDIA6Q15084 440 aa9.94□□□□□ -0.82
CASC4-206ENST00000558847 ARHGEF1Q92888 912 aaKnown RBP9.94□□□□□ -0.82
CASC4-206ENST00000558847 SEPT9Q9UHD8 586 aaPredicted RBP9.94□□□□□ -0.82
CASC4-206ENST00000558847 BCAMP50895 628 aa9.93□□□□□ -0.82
CASC4-206ENST00000558847 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
CASC4-206ENST00000558847 SPDYE16A6NNV3 312 aaPredicted RBP9.92□□□□□ -0.82
CASC4-206ENST00000558847 TRIM6-TRIM34B2RNG4 842 aa9.92□□□□□ -0.82
CASC4-206ENST00000558847 ONECUT3O60422 494 aaPredicted RBP9.91□□□□□ -0.82
CASC4-206ENST00000558847 ZFRQ96KR1 1074 aaKnown RBP9.91□□□□□ -0.82
CASC4-206ENST00000558847 EN1Q05925 392 aaPredicted RBP9.9□□□□□ -0.82
CASC4-206ENST00000558847 SOWAHBA6NEL2 793 aa9.89□□□□□ -0.83
CASC4-206ENST00000558847 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
CASC4-206ENST00000558847 TSR1Q2NL82 804 aaKnown RBP9.89□□□□□ -0.83
CASC4-206ENST00000558847 PACS2Q86VP3 889 aa9.88□□□□□ -0.83
CASC4-206ENST00000558847 FAM98CQ17RN3 349 aaKnown RBP9.87□□□□□ -0.83
CASC4-206ENST00000558847 IFFO2Q5TF58 517 aa9.87□□□□□ -0.83
CASC4-206ENST00000558847 LRCH3Q96II8 777 aa9.85□□□□□ -0.83
CASC4-206ENST00000558847 WBP1LQ9NX94 342 aa9.85□□□□□ -0.83
CASC4-206ENST00000558847 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.85□□□□□ -0.83
CASC4-206ENST00000558847 A0A0G2JS52 829 aa9.83□□□□□ -0.84
CASC4-206ENST00000558847 NYAP1Q6ZVC0 841 aa9.83□□□□□ -0.84
CASC4-206ENST00000558847 TSKSQ9UJT2 592 aa9.83□□□□□ -0.84
CASC4-206ENST00000558847 HPS5Q9UPZ3 1129 aa9.83□□□□□ -0.84
CASC4-206ENST00000558847 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
CASC4-206ENST00000558847 SEMA3EO15041 775 aa9.81□□□□□ -0.84
CASC4-206ENST00000558847 TSR3Q9UJK0 312 aaKnown RBP9.81□□□□□ -0.84
CASC4-206ENST00000558847 SMAPO00193 183 aa9.8□□□□□ -0.84
CASC4-206ENST00000558847 PRSS12P56730 875 aa9.8□□□□□ -0.84
CASC4-206ENST00000558847 CERKQ8TCT0 537 aa9.8□□□□□ -0.84
CASC4-206ENST00000558847 TESPA1A2RU30 521 aaPredicted RBP9.79□□□□□ -0.84
CASC4-206ENST00000558847 RGS20O76081 388 aa9.79□□□□□ -0.84
CASC4-206ENST00000558847 MLLT3P42568 568 aaPredicted RBP9.79□□□□□ -0.84
CASC4-206ENST00000558847 ITGBL1O95965 494 aaPredicted RBP9.78□□□□□ -0.84
CASC4-206ENST00000558847 KCNC4Q03721 635 aa9.78□□□□□ -0.84
CASC4-206ENST00000558847 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
CASC4-206ENST00000558847 PPP4CP60510 307 aa9.77□□□□□ -0.85
CASC4-206ENST00000558847 PNMA3Q9UL41 463 aa9.77□□□□□ -0.85
CASC4-206ENST00000558847 NBPF26B4DH59 902 aa9.76□□□□□ -0.85
CASC4-206ENST00000558847 OSBPP22059 807 aa9.75□□□□□ -0.85
CASC4-206ENST00000558847 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
CASC4-206ENST00000558847 TATDN2Q93075 761 aa9.75□□□□□ -0.85
CASC4-206ENST00000558847 IRX2Q9BZI1 471 aaPredicted RBP9.75□□□□□ -0.85
CASC4-206ENST00000558847 CDHR5Q9HBB8 845 aa9.75□□□□□ -0.85
CASC4-206ENST00000558847 RNF40O75150 1001 aa9.74□□□□□ -0.85
CASC4-206ENST00000558847 HDGFP51858 240 aaKnown RBP9.74□□□□□ -0.85
CASC4-206ENST00000558847 FAM198AQ9UFP1 575 aa9.74□□□□□ -0.85
CASC4-206ENST00000558847 NUDT18Q6ZVK8 323 aa9.72□□□□□ -0.85
CASC4-206ENST00000558847 C3orf80F5H4A9 247 aa9.7□□□□□ -0.86
CASC4-206ENST00000558847 TPRNQ4KMQ1 711 aa9.69□□□□□ -0.86
CASC4-206ENST00000558847 RBM27Q9P2N5 1060 aaKnown RBP9.68□□□□□ -0.86
CASC4-206ENST00000558847 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
CASC4-206ENST00000558847 PRKCSHP14314 528 aaPredicted RBP9.64□□□□□ -0.87
CASC4-206ENST00000558847 RBM26Q5T8P6 1007 aaKnown RBP9.64□□□□□ -0.87
CASC4-206ENST00000558847 SLC4A3P48751 1232 aa9.63□□□□□ -0.87
CASC4-206ENST00000558847 SMYD5Q6GMV2 418 aa9.63□□□□□ -0.87
CASC4-206ENST00000558847 MTRQ99707 1265 aa9.63□□□□□ -0.87
CASC4-206ENST00000558847 NPDC1Q9NQX5 325 aaPredicted RBP9.63□□□□□ -0.87
CASC4-206ENST00000558847 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
CASC4-206ENST00000558847 SWT1Q5T5J6 900 aaKnown RBP9.62□□□□□ -0.87
CASC4-206ENST00000558847 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
CASC4-206ENST00000558847 IL21Q9HBE4 155 aa9.62□□□□□ -0.87
CASC4-206ENST00000558847 GPR37O15354 613 aa9.61□□□□□ -0.87
CASC4-206ENST00000558847 SLF2Q8IX21 1173 aa9.61□□□□□ -0.87
CASC4-206ENST00000558847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.6□□□□□ -0.87
CASC4-206ENST00000558847 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
CASC4-206ENST00000558847 APLP1P51693 650 aa9.59□□□□□ -0.87
CASC4-206ENST00000558847 LMOD2Q6P5Q4 547 aa9.59□□□□□ -0.87
CASC4-206ENST00000558847 NUTM2FA1L443 756 aa9.58□□□□□ -0.88
CASC4-206ENST00000558847 TULP1O00294 542 aaPredicted RBP9.57□□□□□ -0.88
CASC4-206ENST00000558847 PTGDRQ13258 359 aa9.57□□□□□ -0.88
CASC4-206ENST00000558847 Q6ZNB5 142 aa9.57□□□□□ -0.88
CASC4-206ENST00000558847 ZNF516Q92618 1163 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms