RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 SNPHO15079 494 aa14.03□□□□□ -0.16
SCG3-203ENST00000558709 JPH4Q96JJ6 628 aa14.02□□□□□ -0.17
SCG3-203ENST00000558709 CRISPLD2Q9H0B8 497 aa14.02□□□□□ -0.17
SCG3-203ENST00000558709 PAXIP1Q6ZW49 1069 aaPredicted RBP14.01□□□□□ -0.17
SCG3-203ENST00000558709 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
SCG3-203ENST00000558709 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
SCG3-203ENST00000558709 GPHNQ9NQX3 736 aaPredicted RBP13.99□□□□□ -0.17
SCG3-203ENST00000558709 TMC2Q8TDI7 906 aa13.98□□□□□ -0.17
SCG3-203ENST00000558709 FAM163AQ96GL9 167 aaPredicted RBP13.98□□□□□ -0.17
SCG3-203ENST00000558709 CUL7Q14999 1698 aa13.98□□□□□ -0.17
SCG3-203ENST00000558709 ST18O60284 1047 aa13.97□□□□□ -0.17
SCG3-203ENST00000558709 ADGRL1O94910 1474 aa13.96□□□□□ -0.17
SCG3-203ENST00000558709 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
SCG3-203ENST00000558709 FOXK1P85037 733 aa13.95□□□□□ -0.18
SCG3-203ENST00000558709 HECW2Q9P2P5 1572 aa13.95□□□□□ -0.18
SCG3-203ENST00000558709 DSG2Q14126 1118 aa13.92□□□□□ -0.18
SCG3-203ENST00000558709 DOK7Q18PE1 504 aa13.92□□□□□ -0.18
SCG3-203ENST00000558709 KIAA0586Q9BVV6 1533 aa13.9□□□□□ -0.18
SCG3-203ENST00000558709 GLI2P10070 1586 aa13.9□□□□□ -0.18
SCG3-203ENST00000558709 MFSD10Q14728 455 aa13.89□□□□□ -0.19
SCG3-203ENST00000558709 MAP3K4Q9Y6R4 1608 aa13.89□□□□□ -0.19
SCG3-203ENST00000558709 SLC34A2O95436 690 aa13.88□□□□□ -0.19
SCG3-203ENST00000558709 PDE4AP27815 886 aa13.88□□□□□ -0.19
SCG3-203ENST00000558709 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
SCG3-203ENST00000558709 ZSWIM6Q9HCJ5 1215 aa13.87□□□□□ -0.19
SCG3-203ENST00000558709 ABCC2Q92887 1545 aa13.86□□□□□ -0.19
SCG3-203ENST00000558709 ASXL2Q76L83 1435 aa13.84□□□□□ -0.19
SCG3-203ENST00000558709 HOXB1P14653 301 aaPredicted RBP13.84□□□□□ -0.19
SCG3-203ENST00000558709 PPP1R15BQ5SWA1 713 aa13.84□□□□□ -0.19
SCG3-203ENST00000558709 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
SCG3-203ENST00000558709 PLB1Q6P1J6 1458 aa13.83□□□□□ -0.2
SCG3-203ENST00000558709 LARP6Q9BRS8 491 aaKnown RBP13.83□□□□□ -0.2
SCG3-203ENST00000558709 PTPRGP23470 1445 aa13.82□□□□□ -0.2
SCG3-203ENST00000558709 COL17A1Q9UMD9 1497 aaPredicted RBP13.82□□□□□ -0.2
SCG3-203ENST00000558709 POTEMA6NI47 508 aa13.82□□□□□ -0.2
SCG3-203ENST00000558709 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
SCG3-203ENST00000558709 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
SCG3-203ENST00000558709 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
SCG3-203ENST00000558709 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
SCG3-203ENST00000558709 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
SCG3-203ENST00000558709 ZNF710Q8N1W2 664 aa13.81□□□□□ -0.2
SCG3-203ENST00000558709 DDX27Q96GQ7 796 aaKnown RBP13.81□□□□□ -0.2
SCG3-203ENST00000558709 IQGAP2Q13576 1575 aa13.8□□□□□ -0.2
SCG3-203ENST00000558709 TTBK1Q5TCY1 1321 aaPredicted RBP13.8□□□□□ -0.2
SCG3-203ENST00000558709 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
SCG3-203ENST00000558709 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
SCG3-203ENST00000558709 UHRF1BP1LA0JNW5 1464 aa13.78□□□□□ -0.2
SCG3-203ENST00000558709 EPRSP07814 1512 aaKnown RBP13.78□□□□□ -0.2
SCG3-203ENST00000558709 MARVELD3Q96A59 401 aa13.77□□□□□ -0.21
SCG3-203ENST00000558709 TNIKQ9UKE5 1360 aa13.77□□□□□ -0.21
SCG3-203ENST00000558709 TEX14Q8IWB6 1497 aa13.76□□□□□ -0.21
SCG3-203ENST00000558709 CARMIL2Q6F5E8 1435 aa13.76□□□□□ -0.21
SCG3-203ENST00000558709 IGF1RP08069 1367 aa13.76□□□□□ -0.21
SCG3-203ENST00000558709 PCDHGA4Q9Y5G9 962 aa13.76□□□□□ -0.21
SCG3-203ENST00000558709 KIF21BO75037 1637 aa13.75□□□□□ -0.21
SCG3-203ENST00000558709 ARSIQ5FYB1 569 aa13.75□□□□□ -0.21
SCG3-203ENST00000558709 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
SCG3-203ENST00000558709 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCG3-203ENST00000558709 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
SCG3-203ENST00000558709 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
SCG3-203ENST00000558709 KDM5BQ9UGL1 1544 aa13.73□□□□□ -0.21
SCG3-203ENST00000558709 UACAQ9BZF9 1416 aa13.73□□□□□ -0.21
SCG3-203ENST00000558709 EMP3P54852 163 aa13.72□□□□□ -0.21
SCG3-203ENST00000558709 CAMK2BQ13554 666 aa13.72□□□□□ -0.21
SCG3-203ENST00000558709 DISP1Q96F81 1524 aa13.72□□□□□ -0.21
SCG3-203ENST00000558709 POTEB3A0JP26 581 aa13.7□□□□□ -0.22
SCG3-203ENST00000558709 POTEBQ6S5H4 581 aa13.7□□□□□ -0.22
SCG3-203ENST00000558709 KIAA0556O60303 1618 aa13.7□□□□□ -0.22
SCG3-203ENST00000558709 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
SCG3-203ENST00000558709 CTTNBP2Q8WZ74 1663 aa13.67□□□□□ -0.22
SCG3-203ENST00000558709 CARMIL1Q5VZK9 1371 aa13.67□□□□□ -0.22
SCG3-203ENST00000558709 WDR7Q9Y4E6 1490 aa13.66□□□□□ -0.22
SCG3-203ENST00000558709 UGGT2Q9NYU1 1516 aa13.65□□□□□ -0.22
SCG3-203ENST00000558709 NUDT7P0C024 238 aa13.65□□□□□ -0.22
SCG3-203ENST00000558709 UPF1Q92900 1129 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCG3-203ENST00000558709 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
SCG3-203ENST00000558709 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
SCG3-203ENST00000558709 FBXO41Q8TF61 875 aa13.63□□□□□ -0.23
SCG3-203ENST00000558709 MAGI3Q5TCQ9 1506 aa13.62□□□□□ -0.23
SCG3-203ENST00000558709 ADAMTSL3P82987 1691 aa13.62□□□□□ -0.23
SCG3-203ENST00000558709 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
SCG3-203ENST00000558709 TBC1D12O60347 775 aa13.61□□□□□ -0.23
SCG3-203ENST00000558709 ERBB3P21860 1342 aa13.59□□□□□ -0.23
SCG3-203ENST00000558709 PCDH10Q9P2E7 1040 aa13.58□□□□□ -0.24
SCG3-203ENST00000558709 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
SCG3-203ENST00000558709 CD109Q6YHK3 1445 aa13.57□□□□□ -0.24
SCG3-203ENST00000558709 BCORL1Q5H9F3 1711 aa13.57□□□□□ -0.24
SCG3-203ENST00000558709 VARS2Q5ST30 1063 aaKnown RBP13.57□□□□□ -0.24
SCG3-203ENST00000558709 ABCA8O94911 1581 aa13.57□□□□□ -0.24
SCG3-203ENST00000558709 CDAN1Q8IWY9 1227 aa13.56□□□□□ -0.24
SCG3-203ENST00000558709 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
SCG3-203ENST00000558709 ARIH1Q9Y4X5 557 aaPredicted RBP13.56□□□□□ -0.24
SCG3-203ENST00000558709 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
SCG3-203ENST00000558709 E2F4Q16254 413 aa13.55□□□□□ -0.24
SCG3-203ENST00000558709 PTPRMP28827 1452 aa13.55□□□□□ -0.24
SCG3-203ENST00000558709 WDR70Q9NW82 654 aa13.54□□□□□ -0.24
SCG3-203ENST00000558709 RAPGEF2Q9Y4G8 1499 aa13.54□□□□□ -0.24
SCG3-203ENST00000558709 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
SCG3-203ENST00000558709 ARAP3Q8WWN8 1544 aa13.53□□□□□ -0.24
SCG3-203ENST00000558709 RIMS1Q86UR5 1692 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms