RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ZMYM4Q5VZL5 1548 aa7.35□□□□□ -1.23
GABPB1-207ENST00000558335 DENND4BO75064 1496 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-207ENST00000558335 NUP160Q12769 1436 aa7.35□□□□□ -1.23
GABPB1-207ENST00000558335 ANKRD50Q9ULJ7 1429 aa7.35□□□□□ -1.23
GABPB1-207ENST00000558335 KDM6BO15054 1643 aa7.34□□□□□ -1.23
GABPB1-207ENST00000558335 LAMC1P11047 1609 aa7.34□□□□□ -1.23
GABPB1-207ENST00000558335 EIF2AK4Q9P2K8 1649 aaKnown RBP7.34□□□□□ -1.23
GABPB1-207ENST00000558335 C11orf95C9JLR9 678 aaPredicted RBP7.34□□□□□ -1.23
GABPB1-207ENST00000558335 RALBP1Q15311 655 aa7.34□□□□□ -1.23
GABPB1-207ENST00000558335 KCNH8Q96L42 1107 aa7.34□□□□□ -1.23
GABPB1-207ENST00000558335 STAC3Q96MF2 364 aa7.34□□□□□ -1.23
GABPB1-207ENST00000558335 RTN4Q9NQC3 1192 aaKnown RBP7.34□□□□□ -1.23
GABPB1-207ENST00000558335 CDC42BPAQ5VT25 1732 aa7.34□□□□□ -1.23
GABPB1-207ENST00000558335 PZPP20742 1482 aa7.34□□□□□ -1.23
GABPB1-207ENST00000558335 ERCC6Q03468 1493 aa7.34□□□□□ -1.23
GABPB1-207ENST00000558335 SMG6Q86US8 1419 aaKnown RBP7.34□□□□□ -1.23
GABPB1-207ENST00000558335 ABCA8O94911 1581 aa7.33□□□□□ -1.24
GABPB1-207ENST00000558335 KDM5CP41229 1560 aa7.33□□□□□ -1.24
GABPB1-207ENST00000558335 ZMYND15Q9H091 742 aa7.33□□□□□ -1.24
GABPB1-207ENST00000558335 MAST1Q9Y2H9 1570 aa7.33□□□□□ -1.24
GABPB1-207ENST00000558335 USP47Q96K76 1375 aa7.33□□□□□ -1.24
GABPB1-207ENST00000558335 KIF15Q9NS87 1388 aa7.33□□□□□ -1.24
GABPB1-207ENST00000558335 BRD2P25440 801 aaKnown RBP7.32□□□□□ -1.24
GABPB1-207ENST00000558335 PDE3BQ13370 1112 aa7.32□□□□□ -1.24
GABPB1-207ENST00000558335 AAMPQ13685 434 aa7.32□□□□□ -1.24
GABPB1-207ENST00000558335 C9orf84Q5VXU9 1444 aa7.32□□□□□ -1.24
GABPB1-207ENST00000558335 KIF7Q2M1P5 1343 aa7.31□□□□□ -1.24
GABPB1-207ENST00000558335 CAPN15O75808 1086 aa7.31□□□□□ -1.24
GABPB1-207ENST00000558335 SLC4A2P04920 1241 aa7.31□□□□□ -1.24
GABPB1-207ENST00000558335 CEP170Q5SW79 1584 aa7.31□□□□□ -1.24
GABPB1-207ENST00000558335 HIRIP3Q9BW71 556 aaPredicted RBP7.31□□□□□ -1.24
GABPB1-207ENST00000558335 SPINK5Q9NQ38 1064 aaPredicted RBP7.31□□□□□ -1.24
GABPB1-207ENST00000558335 FBXO3Q9UK99 471 aa7.31□□□□□ -1.24
GABPB1-207ENST00000558335 BRD4O60885 1362 aaPredicted RBP7.31□□□□□ -1.24
GABPB1-207ENST00000558335 PREX2Q70Z35 1606 aa7.3□□□□□ -1.24
GABPB1-207ENST00000558335 CCDC141Q6ZP82 1450 aa7.3□□□□□ -1.24
GABPB1-207ENST00000558335 PTPRGP23470 1445 aa7.3□□□□□ -1.24
GABPB1-207ENST00000558335 NCLP19338 710 aaKnown RBP7.3□□□□□ -1.24
GABPB1-207ENST00000558335 DSG3P32926 999 aa7.3□□□□□ -1.24
GABPB1-207ENST00000558335 BCANQ96GW7 911 aa7.3□□□□□ -1.24
GABPB1-207ENST00000558335 ZNF608Q9ULD9 1512 aaPredicted RBP7.3□□□□□ -1.24
GABPB1-207ENST00000558335 ABCC10Q5T3U5 1492 aa7.3□□□□□ -1.24
GABPB1-207ENST00000558335 PLXNC1O60486 1568 aa7.29□□□□□ -1.24
GABPB1-207ENST00000558335 JPH4Q96JJ6 628 aa7.29□□□□□ -1.24
GABPB1-207ENST00000558335 CCDC136Q96JN2 1154 aa7.29□□□□□ -1.24
GABPB1-207ENST00000558335 NUDCQ9Y266 331 aa7.29□□□□□ -1.24
GABPB1-207ENST00000558335 NUP155O75694 1391 aa7.29□□□□□ -1.24
GABPB1-207ENST00000558335 UNC13BO14795 1591 aa7.29□□□□□ -1.24
GABPB1-207ENST00000558335 MYBBP1AQ9BQG0 1328 aaKnown RBP7.28□□□□□ -1.24
GABPB1-207ENST00000558335 PRG4Q92954 1404 aaPredicted RBP7.28□□□□□ -1.24
GABPB1-207ENST00000558335 PKD2Q13563 968 aa7.28□□□□□ -1.24
GABPB1-207ENST00000558335 FAM9BQ8IZU0 186 aa7.28□□□□□ -1.24
GABPB1-207ENST00000558335 TMC1Q8TDI8 760 aa7.28□□□□□ -1.24
GABPB1-207ENST00000558335 USP35Q9P2H5 1018 aa7.28□□□□□ -1.24
GABPB1-207ENST00000558335 E9PCH4 1651 aa7.28□□□□□ -1.24
GABPB1-207ENST00000558335 CDCA8Q53HL2 280 aa7.27□□□□□ -1.25
GABPB1-207ENST00000558335 RTL5Q5HYW3 569 aaPredicted RBP7.27□□□□□ -1.25
GABPB1-207ENST00000558335 NPM2Q86SE8 214 aaKnown RBP7.27□□□□□ -1.25
GABPB1-207ENST00000558335 CARD11Q9BXL7 1154 aa7.27□□□□□ -1.25
GABPB1-207ENST00000558335 BCCIPQ9P287 314 aaKnown RBP eCLIP7.27□□□□□ -1.25
GABPB1-207ENST00000558335 PLB1Q6P1J6 1458 aa7.27□□□□□ -1.25
GABPB1-207ENST00000558335 MYO5CQ9NQX4 1742 aa7.27□□□□□ -1.25
GABPB1-207ENST00000558335 CCDC144AA2RUR9 1427 aa7.27□□□□□ -1.25
GABPB1-207ENST00000558335 RNF123Q5XPI4 1314 aa7.27□□□□□ -1.25
GABPB1-207ENST00000558335 ATP10AO60312 1499 aa7.26□□□□□ -1.25
GABPB1-207ENST00000558335 RRP9O43818 475 aaKnown RBP7.26□□□□□ -1.25
GABPB1-207ENST00000558335 RBM10P98175 930 aaKnown RBP7.26□□□□□ -1.25
GABPB1-207ENST00000558335 NBPF8Q3BBV2 869 aa7.26□□□□□ -1.25
GABPB1-207ENST00000558335 IQGAP3Q86VI3 1631 aa7.26□□□□□ -1.25
GABPB1-207ENST00000558335 DUOX2Q9NRD8 1548 aa7.26□□□□□ -1.25
GABPB1-207ENST00000558335 ATP10BO94823 1461 aa7.25□□□□□ -1.25
GABPB1-207ENST00000558335 DHX29Q7Z478 1369 aaKnown RBP7.25□□□□□ -1.25
GABPB1-207ENST00000558335 ANP32AP39687 249 aaKnown RBP7.25□□□□□ -1.25
GABPB1-207ENST00000558335 NLRP13Q86W25 1043 aa7.25□□□□□ -1.25
GABPB1-207ENST00000558335 VSIG10Q8N0Z9 540 aa7.25□□□□□ -1.25
GABPB1-207ENST00000558335 ZNF777Q9ULD5 760 aaPredicted RBP7.25□□□□□ -1.25
GABPB1-207ENST00000558335 TRPM1Q7Z4N2 1603 aa7.25□□□□□ -1.25
GABPB1-207ENST00000558335 FAM135AQ9P2D6 1515 aa7.25□□□□□ -1.25
GABPB1-207ENST00000558335 ERBINQ96RT1 1412 aa7.25□□□□□ -1.25
GABPB1-207ENST00000558335 GPRASP1Q5JY77 1395 aa7.24□□□□□ -1.25
GABPB1-207ENST00000558335 ARAP3Q8WWN8 1544 aa7.24□□□□□ -1.25
GABPB1-207ENST00000558335 TULP1O00294 542 aaPredicted RBP7.24□□□□□ -1.25
GABPB1-207ENST00000558335 HSP90B1P14625 803 aaKnown RBP7.24□□□□□ -1.25
GABPB1-207ENST00000558335 NGEFQ8N5V2 710 aa7.24□□□□□ -1.25
GABPB1-207ENST00000558335 NEURL4Q96JN8 1562 aa7.24□□□□□ -1.25
GABPB1-207ENST00000558335 BCORL1Q5H9F3 1711 aa7.24□□□□□ -1.25
GABPB1-207ENST00000558335 CDC42BPBQ9Y5S2 1711 aa7.24□□□□□ -1.25
GABPB1-207ENST00000558335 LRPPRCP42704 1394 aaKnown RBP7.23□□□□□ -1.25
GABPB1-207ENST00000558335 BCL11BQ9C0K0 894 aaPredicted RBP7.23□□□□□ -1.25
GABPB1-207ENST00000558335 ZNF644Q9H582 1327 aaPredicted RBP7.23□□□□□ -1.25
GABPB1-207ENST00000558335 SHROOM2Q13796 1616 aa7.23□□□□□ -1.25
GABPB1-207ENST00000558335 SAMD9LQ8IVG5 1584 aa7.22□□□□□ -1.25
GABPB1-207ENST00000558335 PRAG1Q86YV5 1406 aa7.22□□□□□ -1.25
GABPB1-207ENST00000558335 PNISRQ8TF01 805 aaKnown RBP7.22□□□□□ -1.25
GABPB1-207ENST00000558335 MAGI2Q86UL8 1455 aa7.22□□□□□ -1.25
GABPB1-207ENST00000558335 PRDM15P57071 1507 aaPredicted RBP7.22□□□□□ -1.25
GABPB1-207ENST00000558335 ARHGAP5Q13017 1502 aa7.22□□□□□ -1.25
GABPB1-207ENST00000558335 SCAPERQ9BY12 1400 aa7.21□□□□□ -1.25
GABPB1-207ENST00000558335 TCERG1O14776 1098 aaKnown RBP7.21□□□□□ -1.26
GABPB1-207ENST00000558335 HMGB1P09429 215 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms