RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 EIF2AK4Q9P2K8 1649 aaKnown RBP17.91■□□□□ 0.46
SHMT2-233ENST00000557529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
SHMT2-233ENST00000557529 DEPDC5O75140 1603 aa17.88■□□□□ 0.45
SHMT2-233ENST00000557529 A2MP01023 1474 aa17.88■□□□□ 0.45
SHMT2-233ENST00000557529 KANK1Q14678 1352 aa17.88■□□□□ 0.45
SHMT2-233ENST00000557529 KIF3BO15066 747 aa17.85■□□□□ 0.45
SHMT2-233ENST00000557529 RAPGEF3O95398 923 aa17.85■□□□□ 0.45
SHMT2-233ENST00000557529 L3MBTL2Q969R5 705 aa17.85■□□□□ 0.45
SHMT2-233ENST00000557529 RICTORQ6R327 1708 aa17.85■□□□□ 0.45
SHMT2-233ENST00000557529 PPRC1Q5VV67 1664 aaKnown RBP17.84■□□□□ 0.45
SHMT2-233ENST00000557529 VWDEQ8N2E2 1590 aa17.83■□□□□ 0.44
SHMT2-233ENST00000557529 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
SHMT2-233ENST00000557529 ATP10AO60312 1499 aa17.82■□□□□ 0.44
SHMT2-233ENST00000557529 ABCA6Q8N139 1617 aa17.82■□□□□ 0.44
SHMT2-233ENST00000557529 ZMYM4Q5VZL5 1548 aa17.82■□□□□ 0.44
SHMT2-233ENST00000557529 KIF13AQ9H1H9 1805 aa17.81■□□□□ 0.44
SHMT2-233ENST00000557529 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
SHMT2-233ENST00000557529 BCORL1Q5H9F3 1711 aa17.8■□□□□ 0.44
SHMT2-233ENST00000557529 FRMPD1Q5SYB0 1578 aa17.8■□□□□ 0.44
SHMT2-233ENST00000557529 CCDC144AA2RUR9 1427 aa17.8■□□□□ 0.44
SHMT2-233ENST00000557529 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
SHMT2-233ENST00000557529 TSPOAP1O95153 1857 aa17.79■□□□□ 0.44
SHMT2-233ENST00000557529 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
SHMT2-233ENST00000557529 TET3O43151 1660 aa17.79■□□□□ 0.44
SHMT2-233ENST00000557529 MROH1Q8NDA8 1641 aa17.78■□□□□ 0.44
SHMT2-233ENST00000557529 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
SHMT2-233ENST00000557529 LMTK2Q8IWU2 1503 aa17.76■□□□□ 0.43
SHMT2-233ENST00000557529 E9PCH4 1651 aa17.74■□□□□ 0.43
SHMT2-233ENST00000557529 PTPRTO14522 1441 aa17.73■□□□□ 0.43
SHMT2-233ENST00000557529 YEATS2Q9ULM3 1422 aa17.73■□□□□ 0.43
SHMT2-233ENST00000557529 TRPM2O94759 1503 aa17.71■□□□□ 0.43
SHMT2-233ENST00000557529 EFCAB6Q5THR3 1501 aa17.71■□□□□ 0.43
SHMT2-233ENST00000557529 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
SHMT2-233ENST00000557529 NBPF8Q3BBV2 869 aa17.69■□□□□ 0.42
SHMT2-233ENST00000557529 REREQ9P2R6 1566 aa17.69■□□□□ 0.42
SHMT2-233ENST00000557529 GGT6Q6P531 493 aa17.68■□□□□ 0.42
SHMT2-233ENST00000557529 SPHKAPQ2M3C7 1700 aa17.68■□□□□ 0.42
SHMT2-233ENST00000557529 ABCC3O15438 1527 aa17.66■□□□□ 0.42
SHMT2-233ENST00000557529 WASHC2CQ9Y4E1 1318 aa17.66■□□□□ 0.42
SHMT2-233ENST00000557529 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
SHMT2-233ENST00000557529 AGLP35573 1532 aa17.65■□□□□ 0.42
SHMT2-233ENST00000557529 CEP152O94986 1710 aa17.65■□□□□ 0.42
SHMT2-233ENST00000557529 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
SHMT2-233ENST00000557529 COL17A1Q9UMD9 1497 aaPredicted RBP17.64■□□□□ 0.41
SHMT2-233ENST00000557529 ZC3H13Q5T200 1668 aaKnown RBP17.63■□□□□ 0.41
SHMT2-233ENST00000557529 SPATA31E1Q6ZUB1 1445 aa17.63■□□□□ 0.41
SHMT2-233ENST00000557529 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
SHMT2-233ENST00000557529 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
SHMT2-233ENST00000557529 RALGAPBQ86X10 1494 aa17.62■□□□□ 0.41
SHMT2-233ENST00000557529 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
SHMT2-233ENST00000557529 HSPA5P11021 654 aaKnown RBP17.61■□□□□ 0.41
SHMT2-233ENST00000557529 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
SHMT2-233ENST00000557529 STAC3Q96MF2 364 aa17.61■□□□□ 0.41
SHMT2-233ENST00000557529 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
SHMT2-233ENST00000557529 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
SHMT2-233ENST00000557529 CLTCL1P53675 1640 aa17.61■□□□□ 0.41
SHMT2-233ENST00000557529 NPATQ14207 1427 aa17.61■□□□□ 0.41
SHMT2-233ENST00000557529 ARHGAP31Q2M1Z3 1444 aa17.61■□□□□ 0.41
SHMT2-233ENST00000557529 RGL3Q3MIN7 710 aa17.6■□□□□ 0.41
SHMT2-233ENST00000557529 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
SHMT2-233ENST00000557529 CAMSAP1Q5T5Y3 1602 aa17.59■□□□□ 0.41
SHMT2-233ENST00000557529 PRAG1Q86YV5 1406 aa17.58■□□□□ 0.4
SHMT2-233ENST00000557529 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
SHMT2-233ENST00000557529 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
SHMT2-233ENST00000557529 NOS1P29475 1434 aa17.55■□□□□ 0.4
SHMT2-233ENST00000557529 USP47Q96K76 1375 aa17.52■□□□□ 0.4
SHMT2-233ENST00000557529 KIF1BO60333 1816 aa17.52■□□□□ 0.39
SHMT2-233ENST00000557529 CARD11Q9BXL7 1154 aa17.52■□□□□ 0.39
SHMT2-233ENST00000557529 ROCK2O75116 1388 aaKnown RBP17.51■□□□□ 0.39
SHMT2-233ENST00000557529 UGGT1Q9NYU2 1555 aa17.51■□□□□ 0.39
SHMT2-233ENST00000557529 TRPM1Q7Z4N2 1603 aa17.51■□□□□ 0.39
SHMT2-233ENST00000557529 GPRASP1Q5JY77 1395 aa17.51■□□□□ 0.39
SHMT2-233ENST00000557529 ADGRB3O60242 1522 aa17.49■□□□□ 0.39
SHMT2-233ENST00000557529 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
SHMT2-233ENST00000557529 MIER1Q8N108 512 aa17.49■□□□□ 0.39
SHMT2-233ENST00000557529 LAMC1P11047 1609 aa17.48■□□□□ 0.39
SHMT2-233ENST00000557529 MYOM2P54296 1465 aa17.48■□□□□ 0.39
SHMT2-233ENST00000557529 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
SHMT2-233ENST00000557529 SIGLEC1Q9BZZ2 1709 aa17.47■□□□□ 0.39
SHMT2-233ENST00000557529 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
SHMT2-233ENST00000557529 RPGRIP1LQ68CZ1 1315 aa17.46■□□□□ 0.39
SHMT2-233ENST00000557529 PIK3C2BO00750 1634 aa17.46■□□□□ 0.39
SHMT2-233ENST00000557529 SYNMO15061 1565 aa17.46■□□□□ 0.39
SHMT2-233ENST00000557529 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
SHMT2-233ENST00000557529 ESF1Q9H501 851 aaKnown RBP17.44■□□□□ 0.38
SHMT2-233ENST00000557529 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
SHMT2-233ENST00000557529 CCDC7Q96M83 1385 aa17.44■□□□□ 0.38
SHMT2-233ENST00000557529 ARID4BQ4LE39 1312 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-233ENST00000557529 MROH2AA6NES4 1674 aa17.43■□□□□ 0.38
SHMT2-233ENST00000557529 CHGAP10645 457 aaKnown RBP17.43■□□□□ 0.38
SHMT2-233ENST00000557529 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
SHMT2-233ENST00000557529 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
SHMT2-233ENST00000557529 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
SHMT2-233ENST00000557529 MLECQ14165 292 aa17.42■□□□□ 0.38
SHMT2-233ENST00000557529 IFT172Q9UG01 1749 aa17.42■□□□□ 0.38
SHMT2-233ENST00000557529 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
SHMT2-233ENST00000557529 NRXN1Q9ULB1 1477 aa17.41■□□□□ 0.38
SHMT2-233ENST00000557529 KIAA1210Q9ULL0 1709 aa17.41■□□□□ 0.38
SHMT2-233ENST00000557529 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-233ENST00000557529 IDI1Q13907 227 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms