RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 FRMPD1Q5SYB0 1578 aa13.47□□□□□ -0.25
ACTN1-218ENST00000556343 GGT6Q6P531 493 aa13.47□□□□□ -0.25
ACTN1-218ENST00000556343 DHX57Q6P158 1386 aaKnown RBP13.46□□□□□ -0.25
ACTN1-218ENST00000556343 ARID4BQ4LE39 1312 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-218ENST00000556343 ESF1Q9H501 851 aaKnown RBP13.45□□□□□ -0.26
ACTN1-218ENST00000556343 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
ACTN1-218ENST00000556343 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
ACTN1-218ENST00000556343 EIF2AK4Q9P2K8 1649 aaKnown RBP13.43□□□□□ -0.26
ACTN1-218ENST00000556343 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
ACTN1-218ENST00000556343 REREQ9P2R6 1566 aa13.42□□□□□ -0.26
ACTN1-218ENST00000556343 PKD2Q13563 968 aa13.42□□□□□ -0.26
ACTN1-218ENST00000556343 AGLP35573 1532 aa13.41□□□□□ -0.26
ACTN1-218ENST00000556343 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
ACTN1-218ENST00000556343 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
ACTN1-218ENST00000556343 MLECQ14165 292 aa13.39□□□□□ -0.27
ACTN1-218ENST00000556343 UNC13BO14795 1591 aa13.38□□□□□ -0.27
ACTN1-218ENST00000556343 PZPP20742 1482 aa13.37□□□□□ -0.27
ACTN1-218ENST00000556343 FAM135AQ9P2D6 1515 aa13.37□□□□□ -0.27
ACTN1-218ENST00000556343 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
ACTN1-218ENST00000556343 BCORL1Q5H9F3 1711 aa13.35□□□□□ -0.27
ACTN1-218ENST00000556343 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
ACTN1-218ENST00000556343 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-218ENST00000556343 NEUROD1Q13562 356 aa13.34□□□□□ -0.27
ACTN1-218ENST00000556343 FOXD1Q16676 465 aa13.34□□□□□ -0.27
ACTN1-218ENST00000556343 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
ACTN1-218ENST00000556343 IQGAP3Q86VI3 1631 aa13.33□□□□□ -0.28
ACTN1-218ENST00000556343 LMTK2Q8IWU2 1503 aa13.33□□□□□ -0.28
ACTN1-218ENST00000556343 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
ACTN1-218ENST00000556343 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
ACTN1-218ENST00000556343 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
ACTN1-218ENST00000556343 RPRD2Q5VT52 1461 aaKnown RBP13.3□□□□□ -0.28
ACTN1-218ENST00000556343 SIN3AQ96ST3 1273 aa13.3□□□□□ -0.28
ACTN1-218ENST00000556343 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
ACTN1-218ENST00000556343 TONSLQ96HA7 1378 aa13.29□□□□□ -0.28
ACTN1-218ENST00000556343 ABCC3O15438 1527 aa13.29□□□□□ -0.28
ACTN1-218ENST00000556343 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
ACTN1-218ENST00000556343 CCDC144AA2RUR9 1427 aa13.28□□□□□ -0.28
ACTN1-218ENST00000556343 TET3O43151 1660 aa13.28□□□□□ -0.28
ACTN1-218ENST00000556343 SLC52A1Q9NWF4 448 aa13.27□□□□□ -0.29
ACTN1-218ENST00000556343 ZMYM3Q14202 1370 aa13.27□□□□□ -0.29
ACTN1-218ENST00000556343 ZC3H13Q5T200 1668 aaKnown RBP13.27□□□□□ -0.29
ACTN1-218ENST00000556343 PTPRTO14522 1441 aa13.26□□□□□ -0.29
ACTN1-218ENST00000556343 EFCAB6Q5THR3 1501 aa13.25□□□□□ -0.29
ACTN1-218ENST00000556343 NPATQ14207 1427 aa13.23□□□□□ -0.29
ACTN1-218ENST00000556343 STAC3Q96MF2 364 aa13.23□□□□□ -0.29
ACTN1-218ENST00000556343 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
ACTN1-218ENST00000556343 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.29
ACTN1-218ENST00000556343 CEP152O94986 1710 aa13.21□□□□□ -0.3
ACTN1-218ENST00000556343 PLA2R1Q13018 1463 aa13.21□□□□□ -0.3
ACTN1-218ENST00000556343 NOS1P29475 1434 aa13.21□□□□□ -0.3
ACTN1-218ENST00000556343 CAMSAP1Q5T5Y3 1602 aa13.21□□□□□ -0.3
ACTN1-218ENST00000556343 FBXO31Q5XUX0 539 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-218ENST00000556343 E9PCH4 1651 aa13.2□□□□□ -0.3
ACTN1-218ENST00000556343 TRPM2O94759 1503 aa13.19□□□□□ -0.3
ACTN1-218ENST00000556343 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
ACTN1-218ENST00000556343 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
ACTN1-218ENST00000556343 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-218ENST00000556343 IDI1Q13907 227 aa13.18□□□□□ -0.3
ACTN1-218ENST00000556343 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
ACTN1-218ENST00000556343 SIGLEC1Q9BZZ2 1709 aa13.18□□□□□ -0.3
ACTN1-218ENST00000556343 ERVK-7P63135 1459 aa13.17□□□□□ -0.3
ACTN1-218ENST00000556343 RPGRIP1LQ68CZ1 1315 aa13.17□□□□□ -0.3
ACTN1-218ENST00000556343 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
ACTN1-218ENST00000556343 ZNF326Q5BKZ1 582 aaKnown RBP13.17□□□□□ -0.3
ACTN1-218ENST00000556343 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
ACTN1-218ENST00000556343 TNRQ92752 1358 aa13.17□□□□□ -0.3
ACTN1-218ENST00000556343 CEBPAP49715 358 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-218ENST00000556343 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
ACTN1-218ENST00000556343 SPHKAPQ2M3C7 1700 aa13.16□□□□□ -0.3
ACTN1-218ENST00000556343 MROH2AA6NES4 1674 aa13.15□□□□□ -0.31
ACTN1-218ENST00000556343 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
ACTN1-218ENST00000556343 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
ACTN1-218ENST00000556343 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
ACTN1-218ENST00000556343 VGFO15240 615 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-218ENST00000556343 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
ACTN1-218ENST00000556343 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
ACTN1-218ENST00000556343 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
ACTN1-218ENST00000556343 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
ACTN1-218ENST00000556343 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
ACTN1-218ENST00000556343 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
ACTN1-218ENST00000556343 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
ACTN1-218ENST00000556343 CLTCL1P53675 1640 aa13.1□□□□□ -0.31
ACTN1-218ENST00000556343 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
ACTN1-218ENST00000556343 THEMISQ8N1K5 641 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-218ENST00000556343 SYNMO15061 1565 aa13.08□□□□□ -0.32
ACTN1-218ENST00000556343 EID1Q9Y6B2 187 aa13.07□□□□□ -0.32
ACTN1-218ENST00000556343 PTPRMP28827 1452 aa13.07□□□□□ -0.32
ACTN1-218ENST00000556343 RIMS1Q86UR5 1692 aaKnown RBP13.07□□□□□ -0.32
ACTN1-218ENST00000556343 UGGT1Q9NYU2 1555 aa13.07□□□□□ -0.32
ACTN1-218ENST00000556343 KIF1BO60333 1816 aa13.06□□□□□ -0.32
ACTN1-218ENST00000556343 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
ACTN1-218ENST00000556343 C3P01024 1663 aa13.05□□□□□ -0.32
ACTN1-218ENST00000556343 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
ACTN1-218ENST00000556343 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
ACTN1-218ENST00000556343 ADGRB3O60242 1522 aa13.04□□□□□ -0.32
ACTN1-218ENST00000556343 NBPF8Q3BBV2 869 aa13.03□□□□□ -0.32
ACTN1-218ENST00000556343 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
ACTN1-218ENST00000556343 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
ACTN1-218ENST00000556343 BCANQ96GW7 911 aa13.02□□□□□ -0.33
ACTN1-218ENST00000556343 ZFYVE9O95405 1425 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms