RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 ABCA6Q8N139 1617 aa24.98■■□□□ 1.59
LRP1-210ENST00000556247 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
LRP1-210ENST00000556247 COL17A1Q9UMD9 1497 aaPredicted RBP24.96■■□□□ 1.59
LRP1-210ENST00000556247 PKD2Q13563 968 aa24.95■■□□□ 1.58
LRP1-210ENST00000556247 DIP2CQ9Y2E4 1556 aa24.95■■□□□ 1.58
LRP1-210ENST00000556247 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.58
LRP1-210ENST00000556247 NEUROD1Q13562 356 aa24.93■■□□□ 1.58
LRP1-210ENST00000556247 SIN3AQ96ST3 1273 aa24.93■■□□□ 1.58
LRP1-210ENST00000556247 FOXD1Q16676 465 aa24.92■■□□□ 1.58
LRP1-210ENST00000556247 KANK1Q14678 1352 aa24.92■■□□□ 1.58
LRP1-210ENST00000556247 FAM135AQ9P2D6 1515 aa24.91■■□□□ 1.58
LRP1-210ENST00000556247 IQGAP3Q86VI3 1631 aa24.9■■□□□ 1.58
LRP1-210ENST00000556247 ATP10AO60312 1499 aa24.89■■□□□ 1.58
LRP1-210ENST00000556247 DEPDC5O75140 1603 aa24.88■■□□□ 1.57
LRP1-210ENST00000556247 ANKRD30BQ9BXX2 1392 aa24.87■■□□□ 1.57
LRP1-210ENST00000556247 GGT6Q6P531 493 aa24.84■■□□□ 1.57
LRP1-210ENST00000556247 TIMELESSQ9UNS1 1208 aa24.84■■□□□ 1.57
LRP1-210ENST00000556247 BCORL1Q5H9F3 1711 aa24.83■■□□□ 1.57
LRP1-210ENST00000556247 RNF17Q9BXT8 1623 aaKnown RBP24.83■■□□□ 1.56
LRP1-210ENST00000556247 PRDM15P57071 1507 aaPredicted RBP24.81■■□□□ 1.56
LRP1-210ENST00000556247 MROH1Q8NDA8 1641 aa24.8■■□□□ 1.56
LRP1-210ENST00000556247 VWDEQ8N2E2 1590 aa24.8■■□□□ 1.56
LRP1-210ENST00000556247 REREQ9P2R6 1566 aa24.8■■□□□ 1.56
LRP1-210ENST00000556247 ARHGEF40Q8TER5 1519 aa24.79■■□□□ 1.56
LRP1-210ENST00000556247 TONSLQ96HA7 1378 aa24.78■■□□□ 1.56
LRP1-210ENST00000556247 AGLP35573 1532 aa24.75■■□□□ 1.55
LRP1-210ENST00000556247 TET3O43151 1660 aa24.75■■□□□ 1.55
LRP1-210ENST00000556247 WASHC2CQ9Y4E1 1318 aa24.74■■□□□ 1.55
LRP1-210ENST00000556247 LMTK2Q8IWU2 1503 aa24.72■■□□□ 1.55
LRP1-210ENST00000556247 RPRD2Q5VT52 1461 aaKnown RBP24.72■■□□□ 1.55
LRP1-210ENST00000556247 CEP152O94986 1710 aa24.69■■□□□ 1.54
LRP1-210ENST00000556247 E9PCH4 1651 aa24.69■■□□□ 1.54
LRP1-210ENST00000556247 PPP6R1Q9UPN7 881 aa24.68■■□□□ 1.54
LRP1-210ENST00000556247 ABCC3O15438 1527 aa24.67■■□□□ 1.54
LRP1-210ENST00000556247 ARID4BQ4LE39 1312 aaPredicted RBP24.66■■□□□ 1.54
LRP1-210ENST00000556247 EFCAB6Q5THR3 1501 aa24.66■■□□□ 1.54
LRP1-210ENST00000556247 PLA2R1Q13018 1463 aa24.65■■□□□ 1.54
LRP1-210ENST00000556247 CCDC144AA2RUR9 1427 aa24.65■■□□□ 1.54
LRP1-210ENST00000556247 PPP1R15AO75807 674 aaPredicted RBP24.65■■□□□ 1.54
LRP1-210ENST00000556247 MLECQ14165 292 aa24.64■■□□□ 1.54
LRP1-210ENST00000556247 ZC3H13Q5T200 1668 aaKnown RBP24.63■■□□□ 1.53
LRP1-210ENST00000556247 PTPRTO14522 1441 aa24.61■■□□□ 1.53
LRP1-210ENST00000556247 SIGLEC1Q9BZZ2 1709 aa24.61■■□□□ 1.53
LRP1-210ENST00000556247 L3MBTL2Q969R5 705 aa24.61■■□□□ 1.53
LRP1-210ENST00000556247 SPHKAPQ2M3C7 1700 aa24.59■■□□□ 1.53
LRP1-210ENST00000556247 CAMSAP1Q5T5Y3 1602 aa24.59■■□□□ 1.53
LRP1-210ENST00000556247 ESF1Q9H501 851 aaKnown RBP24.58■■□□□ 1.53
LRP1-210ENST00000556247 TRPM2O94759 1503 aa24.57■■□□□ 1.52
LRP1-210ENST00000556247 NPATQ14207 1427 aa24.57■■□□□ 1.52
LRP1-210ENST00000556247 ARHGAP31Q2M1Z3 1444 aa24.56■■□□□ 1.52
LRP1-210ENST00000556247 CFAP65Q6ZU64 1925 aaKnown RBP24.51■■□□□ 1.51
LRP1-210ENST00000556247 CLTCQ00610 1675 aaKnown RBP24.5■■□□□ 1.51
LRP1-210ENST00000556247 CNTLNQ9NXG0 1405 aa24.5■■□□□ 1.51
LRP1-210ENST00000556247 RGL3Q3MIN7 710 aa24.49■■□□□ 1.51
LRP1-210ENST00000556247 CLTCL1P53675 1640 aa24.48■■□□□ 1.51
LRP1-210ENST00000556247 NOS1P29475 1434 aa24.47■■□□□ 1.51
LRP1-210ENST00000556247 DCAF11Q8TEB1 546 aa24.46■■□□□ 1.51
LRP1-210ENST00000556247 KDM2AQ9Y2K7 1162 aa24.44■■□□□ 1.5
LRP1-210ENST00000556247 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
LRP1-210ENST00000556247 UGGT1Q9NYU2 1555 aa24.42■■□□□ 1.5
LRP1-210ENST00000556247 ZMYM3Q14202 1370 aa24.42■■□□□ 1.5
LRP1-210ENST00000556247 PREX1Q8TCU6 1659 aa24.41■■□□□ 1.5
LRP1-210ENST00000556247 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
LRP1-210ENST00000556247 KIF1BO60333 1816 aa24.4■■□□□ 1.5
LRP1-210ENST00000556247 CHGAP10645 457 aaKnown RBP24.4■■□□□ 1.5
LRP1-210ENST00000556247 NBPF8Q3BBV2 869 aa24.4■■□□□ 1.5
LRP1-210ENST00000556247 SLC52A1Q9NWF4 448 aa24.4■■□□□ 1.5
LRP1-210ENST00000556247 ZNF316A6NFI3 1004 aaPredicted RBP24.39■■□□□ 1.49
LRP1-210ENST00000556247 ZNF326Q5BKZ1 582 aaKnown RBP24.39■■□□□ 1.49
LRP1-210ENST00000556247 ERVK-7P63135 1459 aa24.38■■□□□ 1.49
LRP1-210ENST00000556247 SYNMO15061 1565 aa24.38■■□□□ 1.49
LRP1-210ENST00000556247 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
LRP1-210ENST00000556247 STAC3Q96MF2 364 aa24.36■■□□□ 1.49
LRP1-210ENST00000556247 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
LRP1-210ENST00000556247 IDI1Q13907 227 aa24.35■■□□□ 1.49
LRP1-210ENST00000556247 MROH2AA6NES4 1674 aa24.34■■□□□ 1.49
LRP1-210ENST00000556247 PIK3C2BO00750 1634 aa24.34■■□□□ 1.49
LRP1-210ENST00000556247 SPATA31D1Q6ZQQ2 1576 aa24.33■■□□□ 1.48
LRP1-210ENST00000556247 FER1L4A9Z1Z3 1794 aa24.31■■□□□ 1.48
LRP1-210ENST00000556247 ADGRB3O60242 1522 aa24.3■■□□□ 1.48
LRP1-210ENST00000556247 RPGRIP1LQ68CZ1 1315 aa24.29■■□□□ 1.48
LRP1-210ENST00000556247 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
LRP1-210ENST00000556247 STAG3Q9UJ98 1225 aa24.27■■□□□ 1.48
LRP1-210ENST00000556247 TNRQ92752 1358 aa24.27■■□□□ 1.48
LRP1-210ENST00000556247 CEBPAP49715 358 aaPredicted RBP24.25■■□□□ 1.47
LRP1-210ENST00000556247 RALGAPBQ86X10 1494 aa24.24■■□□□ 1.47
LRP1-210ENST00000556247 EIF4G2P78344 907 aaKnown RBP eCLIP24.23■■□□□ 1.47
LRP1-210ENST00000556247 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
LRP1-210ENST00000556247 C3P01024 1663 aa24.21■■□□□ 1.47
LRP1-210ENST00000556247 TMEM131LA2VDJ0 1609 aa24.21■■□□□ 1.47
LRP1-210ENST00000556247 MADDQ8WXG6 1647 aa24.21■■□□□ 1.47
LRP1-210ENST00000556247 MYOM2P54296 1465 aa24.2■■□□□ 1.47
LRP1-210ENST00000556247 IFT172Q9UG01 1749 aa24.19■■□□□ 1.46
LRP1-210ENST00000556247 ADAMTSL3P82987 1691 aa24.19■■□□□ 1.46
LRP1-210ENST00000556247 CARD11Q9BXL7 1154 aa24.19■■□□□ 1.46
LRP1-210ENST00000556247 ROCK2O75116 1388 aaKnown RBP24.18■■□□□ 1.46
LRP1-210ENST00000556247 RIMS1Q86UR5 1692 aaKnown RBP24.18■■□□□ 1.46
LRP1-210ENST00000556247 VGFO15240 615 aaPredicted RBP24.18■■□□□ 1.46
LRP1-210ENST00000556247 HSPA5P11021 654 aaKnown RBP24.18■■□□□ 1.46
LRP1-210ENST00000556247 TRPM1Q7Z4N2 1603 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms