RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
HNRNPC-220ENST00000555585 DUOX2Q9NRD8 1548 aa14.2□□□□□ -0.14
HNRNPC-220ENST00000555585 RICTORQ6R327 1708 aa14.19□□□□□ -0.14
HNRNPC-220ENST00000555585 KDM5CP41229 1560 aa14.19□□□□□ -0.14
HNRNPC-220ENST00000555585 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
HNRNPC-220ENST00000555585 KIDINS220Q9ULH0 1771 aa14.19□□□□□ -0.14
HNRNPC-220ENST00000555585 HECW2Q9P2P5 1572 aa14.18□□□□□ -0.14
HNRNPC-220ENST00000555585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.145e-29■□□□□ 10.4
HNRNPC-220ENST00000555585 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
HNRNPC-220ENST00000555585 MLH3Q9UHC1 1453 aa14.16□□□□□ -0.14
HNRNPC-220ENST00000555585 ERBINQ96RT1 1412 aa14.15□□□□□ -0.14
HNRNPC-220ENST00000555585 FRMPD1Q5SYB0 1578 aa14.14□□□□□ -0.15
HNRNPC-220ENST00000555585 MPHOSPH9Q99550 1183 aa14.14□□□□□ -0.15
HNRNPC-220ENST00000555585 KCNA4P22459 653 aa14.13□□□□□ -0.15
HNRNPC-220ENST00000555585 ABCA6Q8N139 1617 aa14.12□□□□□ -0.15
HNRNPC-220ENST00000555585 NUP155O75694 1391 aa14.12□□□□□ -0.15
HNRNPC-220ENST00000555585 DHX29Q7Z478 1369 aaKnown RBP14.12□□□□□ -0.15
HNRNPC-220ENST00000555585 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
HNRNPC-220ENST00000555585 UNC13BO14795 1591 aa14.12□□□□□ -0.15
HNRNPC-220ENST00000555585 A2MP01023 1474 aa14.11□□□□□ -0.15
HNRNPC-220ENST00000555585 PZPP20742 1482 aa14.11□□□□□ -0.15
HNRNPC-220ENST00000555585 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
HNRNPC-220ENST00000555585 EIF2AK4Q9P2K8 1649 aaKnown RBP14.1□□□□□ -0.15
HNRNPC-220ENST00000555585 KDM5DQ9BY66 1539 aa14.1□□□□□ -0.15
HNRNPC-220ENST00000555585 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
HNRNPC-220ENST00000555585 KIF3BO15066 747 aa14.08□□□□□ -0.16
HNRNPC-220ENST00000555585 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
HNRNPC-220ENST00000555585 MAGI2Q86UL8 1455 aa14.07□□□□□ -0.16
HNRNPC-220ENST00000555585 COL17A1Q9UMD9 1497 aaPredicted RBP14.07□□□□□ -0.16
HNRNPC-220ENST00000555585 FAM135AQ9P2D6 1515 aa14.06□□□□□ -0.16
HNRNPC-220ENST00000555585 IQGAP3Q86VI3 1631 aa14.06□□□□□ -0.16
HNRNPC-220ENST00000555585 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
HNRNPC-220ENST00000555585 PKD2Q13563 968 aa14.06□□□□□ -0.16
HNRNPC-220ENST00000555585 SIN3AQ96ST3 1273 aa14.06□□□□□ -0.16
HNRNPC-220ENST00000555585 DEPDC5O75140 1603 aa14.05□□□□□ -0.16
HNRNPC-220ENST00000555585 KANK1Q14678 1352 aa14.05□□□□□ -0.16
HNRNPC-220ENST00000555585 ATP10AO60312 1499 aa14.03□□□□□ -0.16
HNRNPC-220ENST00000555585 BCORL1Q5H9F3 1711 aa14.02□□□□□ -0.16
HNRNPC-220ENST00000555585 RNF17Q9BXT8 1623 aaKnown RBP14.02□□□□□ -0.16
HNRNPC-220ENST00000555585 GGT6Q6P531 493 aa14.01□□□□□ -0.17
HNRNPC-220ENST00000555585 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
HNRNPC-220ENST00000555585 PRDM15P57071 1507 aaPredicted RBP14□□□□□ -0.17
HNRNPC-220ENST00000555585 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
HNRNPC-220ENST00000555585 ANKRD30BQ9BXX2 1392 aa13.99□□□□□ -0.17
HNRNPC-220ENST00000555585 REREQ9P2R6 1566 aa13.99□□□□□ -0.17
HNRNPC-220ENST00000555585 CEP152O94986 1710 aa13.98□□□□□ -0.17
HNRNPC-220ENST00000555585 TET3O43151 1660 aa13.98□□□□□ -0.17
HNRNPC-220ENST00000555585 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
HNRNPC-220ENST00000555585 TONSLQ96HA7 1378 aa13.96□□□□□ -0.17
HNRNPC-220ENST00000555585 E9PCH4 1651 aa13.96□□□□□ -0.17
HNRNPC-220ENST00000555585 TIMELESSQ9UNS1 1208 aa13.95□□□□□ -0.18
HNRNPC-220ENST00000555585 AGLP35573 1532 aa13.95□□□□□ -0.18
HNRNPC-220ENST00000555585 WASHC2CQ9Y4E1 1318 aa13.94□□□□□ -0.18
HNRNPC-220ENST00000555585 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
HNRNPC-220ENST00000555585 LMTK2Q8IWU2 1503 aa13.93□□□□□ -0.18
HNRNPC-220ENST00000555585 RPRD2Q5VT52 1461 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-220ENST00000555585 ZC3H13Q5T200 1668 aaKnown RBP13.92□□□□□ -0.18
HNRNPC-220ENST00000555585 ABCC3O15438 1527 aa13.92□□□□□ -0.18
HNRNPC-220ENST00000555585 SPHKAPQ2M3C7 1700 aa13.92□□□□□ -0.18
HNRNPC-220ENST00000555585 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
HNRNPC-220ENST00000555585 EFCAB6Q5THR3 1501 aa13.91□□□□□ -0.18
HNRNPC-220ENST00000555585 CAMSAP1Q5T5Y3 1602 aa13.91□□□□□ -0.18
HNRNPC-220ENST00000555585 MLECQ14165 292 aa13.91□□□□□ -0.18
HNRNPC-220ENST00000555585 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.19
HNRNPC-220ENST00000555585 PLA2R1Q13018 1463 aa13.88□□□□□ -0.19
HNRNPC-220ENST00000555585 CFAP65Q6ZU64 1925 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-220ENST00000555585 TRPM2O94759 1503 aa13.87□□□□□ -0.19
HNRNPC-220ENST00000555585 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
HNRNPC-220ENST00000555585 CLTCQ00610 1675 aaKnown RBP13.87□□□□□ -0.19
HNRNPC-220ENST00000555585 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
HNRNPC-220ENST00000555585 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
HNRNPC-220ENST00000555585 PTPRTO14522 1441 aa13.86□□□□□ -0.19
HNRNPC-220ENST00000555585 NPATQ14207 1427 aa13.85□□□□□ -0.19
HNRNPC-220ENST00000555585 CLTCL1P53675 1640 aa13.84□□□□□ -0.19
HNRNPC-220ENST00000555585 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
HNRNPC-220ENST00000555585 ARHGAP31Q2M1Z3 1444 aa13.82□□□□□ -0.2
HNRNPC-220ENST00000555585 KIF1BO60333 1816 aa13.81□□□□□ -0.2
HNRNPC-220ENST00000555585 RGL3Q3MIN7 710 aa13.81□□□□□ -0.2
HNRNPC-220ENST00000555585 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
HNRNPC-220ENST00000555585 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
HNRNPC-220ENST00000555585 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
HNRNPC-220ENST00000555585 NOS1P29475 1434 aa13.79□□□□□ -0.2
HNRNPC-220ENST00000555585 CHGAP10645 457 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-220ENST00000555585 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
HNRNPC-220ENST00000555585 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
HNRNPC-220ENST00000555585 FER1L4A9Z1Z3 1794 aa13.77□□□□□ -0.21
HNRNPC-220ENST00000555585 SYNMO15061 1565 aa13.77□□□□□ -0.21
HNRNPC-220ENST00000555585 ZNF326Q5BKZ1 582 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-220ENST00000555585 MROH2AA6NES4 1674 aa13.76□□□□□ -0.21
HNRNPC-220ENST00000555585 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
HNRNPC-220ENST00000555585 ZMYM3Q14202 1370 aa13.76□□□□□ -0.21
HNRNPC-220ENST00000555585 FBXO31Q5XUX0 539 aaPredicted RBP13.76□□□□□ -0.21
HNRNPC-220ENST00000555585 ERVK-7P63135 1459 aa13.75□□□□□ -0.21
HNRNPC-220ENST00000555585 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-220ENST00000555585 NBPF8Q3BBV2 869 aa13.74□□□□□ -0.21
HNRNPC-220ENST00000555585 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
HNRNPC-220ENST00000555585 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
HNRNPC-220ENST00000555585 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
HNRNPC-220ENST00000555585 SPATA31D1Q6ZQQ2 1576 aa13.72□□□□□ -0.21
HNRNPC-220ENST00000555585 ADGRB3O60242 1522 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms