RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 PTPRKQ15262 1439 aa31.23■■■□□ 2.59
FOXN3-209ENST00000555353 ERBINQ96RT1 1412 aa31.23■■■□□ 2.59
FOXN3-209ENST00000555353 CLTCQ00610 1675 aaKnown RBP31.22■■■□□ 2.59
FOXN3-209ENST00000555353 RNF17Q9BXT8 1623 aaKnown RBP31.2■■■□□ 2.59
FOXN3-209ENST00000555353 MROH2AA6NES4 1674 aa31.2■■■□□ 2.58
FOXN3-209ENST00000555353 C3P01024 1663 aa31.19■■■□□ 2.58
FOXN3-209ENST00000555353 CEBPAP49715 358 aaPredicted RBP31.18■■■□□ 2.58
FOXN3-209ENST00000555353 ROCK1Q13464 1354 aa31.16■■■□□ 2.58
FOXN3-209ENST00000555353 FAM135AQ9P2D6 1515 aa31.15■■■□□ 2.58
FOXN3-209ENST00000555353 KDM5DQ9BY66 1539 aa31.14■■■□□ 2.58
FOXN3-209ENST00000555353 ZMYM3Q14202 1370 aa31.14■■■□□ 2.58
FOXN3-209ENST00000555353 WASHC2CQ9Y4E1 1318 aa31.14■■■□□ 2.57
FOXN3-209ENST00000555353 ANKRD50Q9ULJ7 1429 aa31.11■■■□□ 2.57
FOXN3-209ENST00000555353 MROH1Q8NDA8 1641 aa31.09■■■□□ 2.57
FOXN3-209ENST00000555353 SETD1BQ9UPS6 1966 aaKnown RBP31.08■■■□□ 2.57
FOXN3-209ENST00000555353 ZC3H13Q5T200 1668 aaKnown RBP31.08■■■□□ 2.57
FOXN3-209ENST00000555353 DEPDC5O75140 1603 aa31.07■■■□□ 2.56
FOXN3-209ENST00000555353 PRDM15P57071 1507 aaPredicted RBP31.06■■■□□ 2.56
FOXN3-209ENST00000555353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.05■■■□□ 2.561e-6■□□□□ 10
FOXN3-209ENST00000555353 ABCC3O15438 1527 aa31.04■■■□□ 2.56
FOXN3-209ENST00000555353 KANK1Q14678 1352 aa31.02■■■□□ 2.56
FOXN3-209ENST00000555353 CEP152O94986 1710 aa31.02■■■□□ 2.56
FOXN3-209ENST00000555353 PREX1Q8TCU6 1659 aa31.02■■■□□ 2.56
FOXN3-209ENST00000555353 NPATQ14207 1427 aa31.01■■■□□ 2.55
FOXN3-209ENST00000555353 LMTK3Q96Q04 1460 aa30.98■■■□□ 2.55
FOXN3-209ENST00000555353 PZPP20742 1482 aa30.96■■■□□ 2.55
FOXN3-209ENST00000555353 CAMSAP1Q5T5Y3 1602 aa30.96■■■□□ 2.55
FOXN3-209ENST00000555353 UHRF1BP1Q6BDS2 1440 aa30.96■■■□□ 2.55
FOXN3-209ENST00000555353 VWDEQ8N2E2 1590 aa30.91■■■□□ 2.54
FOXN3-209ENST00000555353 GCC2Q8IWJ2 1684 aa30.91■■■□□ 2.54
FOXN3-209ENST00000555353 UNC13BO14795 1591 aa30.91■■■□□ 2.54
FOXN3-209ENST00000555353 FBXO31Q5XUX0 539 aaPredicted RBP30.89■■■□□ 2.54
FOXN3-209ENST00000555353 CFAP65Q6ZU64 1925 aaKnown RBP30.89■■■□□ 2.54
FOXN3-209ENST00000555353 NAIPQ13075 1403 aa30.88■■■□□ 2.53
FOXN3-209ENST00000555353 HFM1A2PYH4 1435 aa30.87■■■□□ 2.53
FOXN3-209ENST00000555353 LMTK2Q8IWU2 1503 aa30.87■■■□□ 2.53
FOXN3-209ENST00000555353 MYO3AQ8NEV4 1616 aa30.86■■■□□ 2.53
FOXN3-209ENST00000555353 TNRQ92752 1358 aa30.85■■■□□ 2.53
FOXN3-209ENST00000555353 HSPA2P54652 639 aa30.85■■■□□ 2.53
FOXN3-209ENST00000555353 ARHGAP31Q2M1Z3 1444 aa30.85■■■□□ 2.53
FOXN3-209ENST00000555353 ERVK-7P63135 1459 aa30.8■■■□□ 2.52
FOXN3-209ENST00000555353 EFCAB6Q5THR3 1501 aa30.8■■■□□ 2.52
FOXN3-209ENST00000555353 SPATA31D1Q6ZQQ2 1576 aa30.8■■■□□ 2.52
FOXN3-209ENST00000555353 NUP155O75694 1391 aa30.8■■■□□ 2.52
FOXN3-209ENST00000555353 TET3O43151 1660 aa30.79■■■□□ 2.52
FOXN3-209ENST00000555353 IQGAP3Q86VI3 1631 aa30.79■■■□□ 2.52
FOXN3-209ENST00000555353 ZNF142P52746 1687 aaPredicted RBP30.79■■■□□ 2.52
FOXN3-209ENST00000555353 CEP170BQ9Y4F5 1589 aaPredicted RBP30.78■■■□□ 2.52
FOXN3-209ENST00000555353 TRIM26Q12899 539 aaPredicted RBP30.74■■■□□ 2.51
FOXN3-209ENST00000555353 A2ML1A8K2U0 1454 aa30.73■■■□□ 2.51
FOXN3-209ENST00000555353 NLRP1Q9C000 1473 aa30.73■■■□□ 2.51
FOXN3-209ENST00000555353 RPRD2Q5VT52 1461 aaKnown RBP30.72■■■□□ 2.51
FOXN3-209ENST00000555353 TRIM52Q96A61 297 aa30.67■■■□□ 2.5
FOXN3-209ENST00000555353 E9PCH4 1651 aa30.67■■■□□ 2.5
FOXN3-209ENST00000555353 NOS1P29475 1434 aa30.64■■■□□ 2.5
FOXN3-209ENST00000555353 UGGT1Q9NYU2 1555 aa30.64■■■□□ 2.49
FOXN3-209ENST00000555353 SETD5Q9C0A6 1442 aa30.62■■■□□ 2.49
FOXN3-209ENST00000555353 STRCQ7RTU9 1775 aa30.62■■■□□ 2.49
FOXN3-209ENST00000555353 SYNMO15061 1565 aa30.61■■■□□ 2.49
FOXN3-209ENST00000555353 THEMISQ8N1K5 641 aaPredicted RBP30.59■■■□□ 2.49
FOXN3-209ENST00000555353 PLA2R1Q13018 1463 aa30.59■■■□□ 2.49
FOXN3-209ENST00000555353 SLC52A1Q9NWF4 448 aa30.56■■■□□ 2.48
FOXN3-209ENST00000555353 UBR1Q8IWV7 1749 aa30.56■■■□□ 2.48
FOXN3-209ENST00000555353 PIK3C2BO00750 1634 aa30.55■■■□□ 2.48
FOXN3-209ENST00000555353 ACIN1Q9UKV3 1341 aaKnown RBP30.55■■■□□ 2.48
FOXN3-209ENST00000555353 DMRT2Q9Y5R5 561 aa30.54■■■□□ 2.48
FOXN3-209ENST00000555353 IDI1Q13907 227 aa30.54■■■□□ 2.48
FOXN3-209ENST00000555353 SLC4A1APQ9BWU0 796 aaKnown RBP30.54■■■□□ 2.48
FOXN3-209ENST00000555353 STAG3Q9UJ98 1225 aa30.54■■■□□ 2.48
FOXN3-209ENST00000555353 RAB3GAP2Q9H2M9 1393 aa30.52■■■□□ 2.48
FOXN3-209ENST00000555353 SPHKAPQ2M3C7 1700 aa30.5■■■□□ 2.47
FOXN3-209ENST00000555353 PKD2Q13563 968 aa30.5■■■□□ 2.47
FOXN3-209ENST00000555353 NCKAP5LQ9HCH0 1330 aa30.5■■■□□ 2.47
FOXN3-209ENST00000555353 KDM5AP29375 1690 aaKnown RBP30.5■■■□□ 2.47
FOXN3-209ENST00000555353 POLR1AO95602 1720 aaPredicted RBP30.48■■■□□ 2.47
FOXN3-209ENST00000555353 ANKLE2Q86XL3 938 aa30.46■■■□□ 2.47
FOXN3-209ENST00000555353 ADGRB3O60242 1522 aa30.45■■■□□ 2.47
FOXN3-209ENST00000555353 PCGF6Q9BYE7 350 aa30.45■■■□□ 2.46
FOXN3-209ENST00000555353 PTPRTO14522 1441 aa30.44■■■□□ 2.46
FOXN3-209ENST00000555353 MPHOSPH9Q99550 1183 aa30.42■■■□□ 2.46
FOXN3-209ENST00000555353 SLIT1O75093 1534 aa30.4■■■□□ 2.46
FOXN3-209ENST00000555353 MYO5BQ9ULV0 1848 aa30.39■■■□□ 2.46
FOXN3-209ENST00000555353 CHGAP10645 457 aaKnown RBP30.39■■■□□ 2.46
FOXN3-209ENST00000555353 TRPM2O94759 1503 aa30.38■■■□□ 2.45
FOXN3-209ENST00000555353 TMEM2Q9UHN6 1383 aa30.38■■■□□ 2.45
FOXN3-209ENST00000555353 ARHGAP23Q9P227 1491 aa30.38■■■□□ 2.45
FOXN3-209ENST00000555353 NEURL4Q96JN8 1562 aa30.37■■■□□ 2.45
FOXN3-209ENST00000555353 TMEM131LA2VDJ0 1609 aa30.37■■■□□ 2.45
FOXN3-209ENST00000555353 HRCP23327 699 aa30.37■■■□□ 2.45
FOXN3-209ENST00000555353 EID1Q9Y6B2 187 aa30.37■■■□□ 2.45
FOXN3-209ENST00000555353 SCAF11Q99590 1463 aaKnown RBP30.35■■■□□ 2.45
FOXN3-209ENST00000555353 FOXD1Q16676 465 aa30.34■■■□□ 2.45
FOXN3-209ENST00000555353 TXNDC2Q86VQ3 553 aa30.34■■■□□ 2.45
FOXN3-209ENST00000555353 CLTCL1P53675 1640 aa30.32■■■□□ 2.44
FOXN3-209ENST00000555353 MED14O60244 1454 aa30.32■■■□□ 2.44
FOXN3-209ENST00000555353 NPHP4O75161 1426 aaPredicted RBP30.32■■■□□ 2.44
FOXN3-209ENST00000555353 IQGAP1P46940 1657 aa30.3■■■□□ 2.44
FOXN3-209ENST00000555353 LTKP29376 864 aa30.3■■■□□ 2.44
FOXN3-209ENST00000555353 KIF1BO60333 1816 aa30.29■■■□□ 2.44
FOXN3-209ENST00000555353 HDGFP51858 240 aaKnown RBP30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms