RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
VTI1B-204ENST00000554659 ST20-MTHFSA0A0A6YYL1 179 aa17.39■□□□□ 0.37
VTI1B-204ENST00000554659 NOC3LQ8WTT2 800 aaKnown RBP17.38■□□□□ 0.37
VTI1B-204ENST00000554659 GPATCH3Q96I76 525 aa17.38■□□□□ 0.37
VTI1B-204ENST00000554659 HNRNPMP52272 730 aaKnown RBP eCLIP17.38■□□□□ 0.37
VTI1B-204ENST00000554659 ST18O60284 1047 aa17.38■□□□□ 0.37
VTI1B-204ENST00000554659 MLECQ14165 292 aa17.37■□□□□ 0.37
VTI1B-204ENST00000554659 PHF14O94880 888 aa17.36■□□□□ 0.37
VTI1B-204ENST00000554659 EXOC6Q8TAG9 804 aa17.36■□□□□ 0.37
VTI1B-204ENST00000554659 CCDC144AA2RUR9 1427 aa17.36■□□□□ 0.37
VTI1B-204ENST00000554659 E9PSI1 815 aa17.36■□□□□ 0.37
VTI1B-204ENST00000554659 TPM4P67936 248 aa17.36■□□□□ 0.37
VTI1B-204ENST00000554659 GSE1Q14687 1217 aa17.36■□□□□ 0.37
VTI1B-204ENST00000554659 PANK3Q9H999 370 aa17.36■□□□□ 0.37
VTI1B-204ENST00000554659 TRIM6-TRIM34B2RNG4 842 aa17.36■□□□□ 0.37
VTI1B-204ENST00000554659 KIF3BO15066 747 aa17.35■□□□□ 0.37
VTI1B-204ENST00000554659 ISY1Q9ULR0 285 aaKnown RBP17.35■□□□□ 0.37
VTI1B-204ENST00000554659 USP47Q96K76 1375 aa17.35■□□□□ 0.37
VTI1B-204ENST00000554659 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
VTI1B-204ENST00000554659 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
VTI1B-204ENST00000554659 HSP90AA2PQ14568 343 aaPredicted RBP17.33■□□□□ 0.37
VTI1B-204ENST00000554659 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
VTI1B-204ENST00000554659 GOLGA6L1Q8N7Z2 621 aa17.32■□□□□ 0.36
VTI1B-204ENST00000554659 CRBNQ96SW2 442 aa17.32■□□□□ 0.36
VTI1B-204ENST00000554659 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
VTI1B-204ENST00000554659 SKOR2Q2VWA4 1001 aaPredicted RBP17.32■□□□□ 0.36
VTI1B-204ENST00000554659 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
VTI1B-204ENST00000554659 PLIN1O60240 522 aa17.3■□□□□ 0.36
VTI1B-204ENST00000554659 ZKSCAN2Q63HK3 967 aa17.3■□□□□ 0.36
VTI1B-204ENST00000554659 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
VTI1B-204ENST00000554659 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
VTI1B-204ENST00000554659 CCDC34Q96HJ3 373 aa17.29■□□□□ 0.36
VTI1B-204ENST00000554659 SLC4A10Q6U841 1118 aa17.29■□□□□ 0.36
VTI1B-204ENST00000554659 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
VTI1B-204ENST00000554659 HSP90B1P14625 803 aaKnown RBP17.28■□□□□ 0.36
VTI1B-204ENST00000554659 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.36
VTI1B-204ENST00000554659 KIF16BQ96L93 1317 aa17.27■□□□□ 0.36
VTI1B-204ENST00000554659 A0A0U1RQG5 324 aaPredicted RBP17.27■□□□□ 0.35
VTI1B-204ENST00000554659 SLC4A3P48751 1232 aa17.27■□□□□ 0.35
VTI1B-204ENST00000554659 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
VTI1B-204ENST00000554659 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
VTI1B-204ENST00000554659 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
VTI1B-204ENST00000554659 KIF3AQ9Y496 699 aa17.25■□□□□ 0.35
VTI1B-204ENST00000554659 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
VTI1B-204ENST00000554659 GORABQ5T7V8 394 aa17.24■□□□□ 0.35
VTI1B-204ENST00000554659 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
VTI1B-204ENST00000554659 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
VTI1B-204ENST00000554659 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
VTI1B-204ENST00000554659 COG6Q9Y2V7 657 aa17.23■□□□□ 0.35
VTI1B-204ENST00000554659 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
VTI1B-204ENST00000554659 BCL2L13Q9BXK5 485 aa17.22■□□□□ 0.35
VTI1B-204ENST00000554659 ATP6V1DQ9Y5K8 247 aa17.22■□□□□ 0.35
VTI1B-204ENST00000554659 PDE4CQ08493 712 aa17.22■□□□□ 0.35
VTI1B-204ENST00000554659 CCDC7Q96M83 1385 aa17.22■□□□□ 0.35
VTI1B-204ENST00000554659 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
VTI1B-204ENST00000554659 DDX19BQ9UMR2 479 aa17.21■□□□□ 0.35
VTI1B-204ENST00000554659 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
VTI1B-204ENST00000554659 APAF1O14727 1248 aa17.2■□□□□ 0.34
VTI1B-204ENST00000554659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
VTI1B-204ENST00000554659 AMPHP49418 695 aa17.19■□□□□ 0.34
VTI1B-204ENST00000554659 EVC2Q86UK5 1308 aa17.19■□□□□ 0.34
VTI1B-204ENST00000554659 CREBRFQ8IUR6 639 aa17.19■□□□□ 0.34
VTI1B-204ENST00000554659 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
VTI1B-204ENST00000554659 CHMP3Q9Y3E7 222 aa17.19■□□□□ 0.34
VTI1B-204ENST00000554659 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
VTI1B-204ENST00000554659 FOXD4L4Q8WXT5 416 aaPredicted RBP17.18■□□□□ 0.34
VTI1B-204ENST00000554659 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
VTI1B-204ENST00000554659 FGD6Q6ZV73 1430 aa17.17■□□□□ 0.34
VTI1B-204ENST00000554659 TPM3P06753 285 aa17.17■□□□□ 0.34
VTI1B-204ENST00000554659 CHMP4CQ96CF2 233 aa17.17■□□□□ 0.34
VTI1B-204ENST00000554659 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
VTI1B-204ENST00000554659 TAF7LQ5H9L4 462 aa17.17■□□□□ 0.34
VTI1B-204ENST00000554659 NUTM2DQ5VT03 806 aaPredicted RBP17.17■□□□□ 0.34
VTI1B-204ENST00000554659 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
VTI1B-204ENST00000554659 CUX1P39880 1505 aa17.17■□□□□ 0.34
VTI1B-204ENST00000554659 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
VTI1B-204ENST00000554659 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
VTI1B-204ENST00000554659 REC8O95072 547 aa17.16■□□□□ 0.34
VTI1B-204ENST00000554659 AAMPQ13685 434 aa17.16■□□□□ 0.34
VTI1B-204ENST00000554659 RILPL2Q969X0 211 aa17.16■□□□□ 0.34
VTI1B-204ENST00000554659 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
VTI1B-204ENST00000554659 RASSF8Q8NHQ8 419 aa17.15■□□□□ 0.34
VTI1B-204ENST00000554659 VGFO15240 615 aaPredicted RBP17.15■□□□□ 0.34
VTI1B-204ENST00000554659 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
VTI1B-204ENST00000554659 ELL2O00472 640 aaPredicted RBP17.13■□□□□ 0.33
VTI1B-204ENST00000554659 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
VTI1B-204ENST00000554659 KIF21BO75037 1637 aa17.13■□□□□ 0.33
VTI1B-204ENST00000554659 COG3Q96JB2 828 aa17.13■□□□□ 0.33
VTI1B-204ENST00000554659 H3BQV1 296 aa17.12■□□□□ 0.33
VTI1B-204ENST00000554659 IFFO2Q5TF58 517 aa17.12■□□□□ 0.33
VTI1B-204ENST00000554659 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
VTI1B-204ENST00000554659 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
VTI1B-204ENST00000554659 GOLGA6L19H0YKK7 550 aa17.11■□□□□ 0.33
VTI1B-204ENST00000554659 SETQ01105 290 aaPredicted RBP17.11■□□□□ 0.33
VTI1B-204ENST00000554659 ROCK1Q13464 1354 aa17.11■□□□□ 0.33
VTI1B-204ENST00000554659 CCAR2Q8N163 923 aaKnown RBP17.11■□□□□ 0.33
VTI1B-204ENST00000554659 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
VTI1B-204ENST00000554659 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
VTI1B-204ENST00000554659 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
VTI1B-204ENST00000554659 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms