RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 ROCK1Q13464 1354 aa14.21□□□□□ -0.14
CHD8-206ENST00000553870 FER1L4A9Z1Z3 1794 aa14.2□□□□□ -0.14
CHD8-206ENST00000553870 ERBINQ96RT1 1412 aa14.2□□□□□ -0.14
CHD8-206ENST00000553870 ZMYM3Q14202 1370 aa14.2□□□□□ -0.14
CHD8-206ENST00000553870 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
CHD8-206ENST00000553870 RIMS1Q86UR5 1692 aaKnown RBP14.2□□□□□ -0.14
CHD8-206ENST00000553870 WASHC2CQ9Y4E1 1318 aa14.18□□□□□ -0.14
CHD8-206ENST00000553870 EIF2AK4Q9P2K8 1649 aaKnown RBP14.18□□□□□ -0.14
CHD8-206ENST00000553870 PTPRKQ15262 1439 aa14.17□□□□□ -0.14
CHD8-206ENST00000553870 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
CHD8-206ENST00000553870 ITGAEP38570 1179 aa14.15□□□□□ -0.14
CHD8-206ENST00000553870 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
CHD8-206ENST00000553870 SETD1BQ9UPS6 1966 aaKnown RBP14.14□□□□□ -0.15
CHD8-206ENST00000553870 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
CHD8-206ENST00000553870 NPATQ14207 1427 aa14.14□□□□□ -0.15
CHD8-206ENST00000553870 KANK1Q14678 1352 aa14.13□□□□□ -0.15
CHD8-206ENST00000553870 RNF17Q9BXT8 1623 aaKnown RBP14.13□□□□□ -0.15
CHD8-206ENST00000553870 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
CHD8-206ENST00000553870 KDM5DQ9BY66 1539 aa14.12□□□□□ -0.15
CHD8-206ENST00000553870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.156e-6■□□□□ 9.7
CHD8-206ENST00000553870 C3P01024 1663 aa14.1□□□□□ -0.15
CHD8-206ENST00000553870 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
CHD8-206ENST00000553870 PRDM15P57071 1507 aaPredicted RBP14.08□□□□□ -0.16
CHD8-206ENST00000553870 DEPDC5O75140 1603 aa14.08□□□□□ -0.16
CHD8-206ENST00000553870 MROH1Q8NDA8 1641 aa14.08□□□□□ -0.16
CHD8-206ENST00000553870 ZC3H13Q5T200 1668 aaKnown RBP14.07□□□□□ -0.16
CHD8-206ENST00000553870 PZPP20742 1482 aa14.07□□□□□ -0.16
CHD8-206ENST00000553870 ABCC3O15438 1527 aa14.07□□□□□ -0.16
CHD8-206ENST00000553870 ARHGAP31Q2M1Z3 1444 aa14.07□□□□□ -0.16
CHD8-206ENST00000553870 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
CHD8-206ENST00000553870 ACIN1Q9UKV3 1341 aaKnown RBP14.06□□□□□ -0.16
CHD8-206ENST00000553870 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
CHD8-206ENST00000553870 LMTK2Q8IWU2 1503 aa14.05□□□□□ -0.16
CHD8-206ENST00000553870 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
CHD8-206ENST00000553870 FBXO31Q5XUX0 539 aaPredicted RBP14.04□□□□□ -0.16
CHD8-206ENST00000553870 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
CHD8-206ENST00000553870 NAIPQ13075 1403 aa14.04□□□□□ -0.16
CHD8-206ENST00000553870 PREX1Q8TCU6 1659 aa14.03□□□□□ -0.16
CHD8-206ENST00000553870 TNRQ92752 1358 aa14.02□□□□□ -0.17
CHD8-206ENST00000553870 NUP155O75694 1391 aa14.01□□□□□ -0.17
CHD8-206ENST00000553870 UNC13BO14795 1591 aa14□□□□□ -0.17
CHD8-206ENST00000553870 HSPA2P54652 639 aa13.99□□□□□ -0.17
CHD8-206ENST00000553870 CAMSAP1Q5T5Y3 1602 aa13.99□□□□□ -0.17
CHD8-206ENST00000553870 SPATA31D1Q6ZQQ2 1576 aa13.99□□□□□ -0.17
CHD8-206ENST00000553870 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
CHD8-206ENST00000553870 NLRP1Q9C000 1473 aa13.99□□□□□ -0.17
CHD8-206ENST00000553870 CEP152O94986 1710 aa13.98□□□□□ -0.17
CHD8-206ENST00000553870 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
CHD8-206ENST00000553870 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
CHD8-206ENST00000553870 ERVK-7P63135 1459 aa13.98□□□□□ -0.17
CHD8-206ENST00000553870 SLC52A1Q9NWF4 448 aa13.97□□□□□ -0.17
CHD8-206ENST00000553870 A2ML1A8K2U0 1454 aa13.97□□□□□ -0.17
CHD8-206ENST00000553870 GCC2Q8IWJ2 1684 aa13.96□□□□□ -0.17
CHD8-206ENST00000553870 EFCAB6Q5THR3 1501 aa13.95□□□□□ -0.18
CHD8-206ENST00000553870 HRCP23327 699 aa13.95□□□□□ -0.18
CHD8-206ENST00000553870 NOS1P29475 1434 aa13.95□□□□□ -0.18
CHD8-206ENST00000553870 TET3O43151 1660 aa13.95□□□□□ -0.18
CHD8-206ENST00000553870 IQGAP3Q86VI3 1631 aa13.94□□□□□ -0.18
CHD8-206ENST00000553870 PKD2Q13563 968 aa13.94□□□□□ -0.18
CHD8-206ENST00000553870 TRIM52Q96A61 297 aa13.94□□□□□ -0.18
CHD8-206ENST00000553870 SETD5Q9C0A6 1442 aa13.94□□□□□ -0.18
CHD8-206ENST00000553870 CEP170BQ9Y4F5 1589 aaPredicted RBP13.94□□□□□ -0.18
CHD8-206ENST00000553870 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
CHD8-206ENST00000553870 ZNF142P52746 1687 aaPredicted RBP13.93□□□□□ -0.18
CHD8-206ENST00000553870 IDI1Q13907 227 aa13.92□□□□□ -0.18
CHD8-206ENST00000553870 PLA2R1Q13018 1463 aa13.92□□□□□ -0.18
CHD8-206ENST00000553870 CFAP65Q6ZU64 1925 aaKnown RBP13.91□□□□□ -0.18
CHD8-206ENST00000553870 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
CHD8-206ENST00000553870 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
CHD8-206ENST00000553870 UGGT1Q9NYU2 1555 aa13.9□□□□□ -0.18
CHD8-206ENST00000553870 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
CHD8-206ENST00000553870 PTPRTO14522 1441 aa13.89□□□□□ -0.19
CHD8-206ENST00000553870 E9PCH4 1651 aa13.86□□□□□ -0.19
CHD8-206ENST00000553870 HDGFP51858 240 aaKnown RBP13.86□□□□□ -0.19
CHD8-206ENST00000553870 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
CHD8-206ENST00000553870 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
CHD8-206ENST00000553870 RAB3GAP2Q9H2M9 1393 aa13.85□□□□□ -0.19
CHD8-206ENST00000553870 SYNMO15061 1565 aa13.85□□□□□ -0.19
CHD8-206ENST00000553870 EID1Q9Y6B2 187 aa13.85□□□□□ -0.19
CHD8-206ENST00000553870 STRCQ7RTU9 1775 aa13.85□□□□□ -0.19
CHD8-206ENST00000553870 KDM5AP29375 1690 aaKnown RBP13.85□□□□□ -0.19
CHD8-206ENST00000553870 TMEM2Q9UHN6 1383 aa13.83□□□□□ -0.19
CHD8-206ENST00000553870 TXNDC2Q86VQ3 553 aa13.83□□□□□ -0.2
CHD8-206ENST00000553870 ARHGAP23Q9P227 1491 aa13.82□□□□□ -0.2
CHD8-206ENST00000553870 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
CHD8-206ENST00000553870 SLIT1O75093 1534 aa13.82□□□□□ -0.2
CHD8-206ENST00000553870 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
CHD8-206ENST00000553870 PIK3C2BO00750 1634 aa13.82□□□□□ -0.2
CHD8-206ENST00000553870 MED14O60244 1454 aa13.81□□□□□ -0.2
CHD8-206ENST00000553870 LTKP29376 864 aa13.8□□□□□ -0.2
CHD8-206ENST00000553870 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHD8-206ENST00000553870 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
CHD8-206ENST00000553870 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
CHD8-206ENST00000553870 NPHP4O75161 1426 aaPredicted RBP13.78□□□□□ -0.2
CHD8-206ENST00000553870 SCAF11Q99590 1463 aaKnown RBP13.78□□□□□ -0.2
CHD8-206ENST00000553870 TRPM2O94759 1503 aa13.78□□□□□ -0.2
CHD8-206ENST00000553870 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
CHD8-206ENST00000553870 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.21
CHD8-206ENST00000553870 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
CHD8-206ENST00000553870 NEURL4Q96JN8 1562 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms