RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 IQGAP3Q86VI3 1631 aa20.62■□□□□ 0.89
ABCD4-219ENST00000553745 BCORL1Q5H9F3 1711 aa20.62■□□□□ 0.89
ABCD4-219ENST00000553745 ARHGEF40Q8TER5 1519 aa20.61■□□□□ 0.89
ABCD4-219ENST00000553745 CLSPNQ9HAW4 1339 aa20.6■□□□□ 0.89
ABCD4-219ENST00000553745 MROH1Q8NDA8 1641 aa20.6■□□□□ 0.89
ABCD4-219ENST00000553745 NUP155O75694 1391 aa20.59■□□□□ 0.89
ABCD4-219ENST00000553745 RNF17Q9BXT8 1623 aaKnown RBP20.59■□□□□ 0.89
ABCD4-219ENST00000553745 FAM135AQ9P2D6 1515 aa20.59■□□□□ 0.89
ABCD4-219ENST00000553745 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.89
ABCD4-219ENST00000553745 MPHOSPH9Q99550 1183 aa20.58■□□□□ 0.89
ABCD4-219ENST00000553745 REREQ9P2R6 1566 aa20.56■□□□□ 0.88
ABCD4-219ENST00000553745 SIGLEC1Q9BZZ2 1709 aa20.55■□□□□ 0.88
ABCD4-219ENST00000553745 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
ABCD4-219ENST00000553745 ATP10AO60312 1499 aa20.54■□□□□ 0.88
ABCD4-219ENST00000553745 VWDEQ8N2E2 1590 aa20.54■□□□□ 0.88
ABCD4-219ENST00000553745 KIF3BO15066 747 aa20.54■□□□□ 0.88
ABCD4-219ENST00000553745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.54■□□□□ 0.882e-10■■□□□ 11.8
ABCD4-219ENST00000553745 CEP152O94986 1710 aa20.52■□□□□ 0.88
ABCD4-219ENST00000553745 FOXD1Q16676 465 aa20.5■□□□□ 0.87
ABCD4-219ENST00000553745 TET3O43151 1660 aa20.49■□□□□ 0.87
ABCD4-219ENST00000553745 AGLP35573 1532 aa20.47■□□□□ 0.87
ABCD4-219ENST00000553745 PKD2Q13563 968 aa20.47■□□□□ 0.87
ABCD4-219ENST00000553745 E9PCH4 1651 aa20.47■□□□□ 0.87
ABCD4-219ENST00000553745 KANK1Q14678 1352 aa20.46■□□□□ 0.87
ABCD4-219ENST00000553745 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
ABCD4-219ENST00000553745 SIN3AQ96ST3 1273 aa20.45■□□□□ 0.86
ABCD4-219ENST00000553745 ANKRD30BQ9BXX2 1392 aa20.44■□□□□ 0.86
ABCD4-219ENST00000553745 ZC3H13Q5T200 1668 aaKnown RBP20.44■□□□□ 0.86
ABCD4-219ENST00000553745 LMTK2Q8IWU2 1503 aa20.44■□□□□ 0.86
ABCD4-219ENST00000553745 EFCAB6Q5THR3 1501 aa20.42■□□□□ 0.86
ABCD4-219ENST00000553745 GGT6Q6P531 493 aa20.42■□□□□ 0.86
ABCD4-219ENST00000553745 ABCC3O15438 1527 aa20.42■□□□□ 0.86
ABCD4-219ENST00000553745 CAMSAP1Q5T5Y3 1602 aa20.41■□□□□ 0.86
ABCD4-219ENST00000553745 DIEXFQ68CQ4 756 aaKnown RBP20.41■□□□□ 0.86
ABCD4-219ENST00000553745 NEUROD1Q13562 356 aa20.4■□□□□ 0.86
ABCD4-219ENST00000553745 SPHKAPQ2M3C7 1700 aa20.4■□□□□ 0.86
ABCD4-219ENST00000553745 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
ABCD4-219ENST00000553745 PLA2R1Q13018 1463 aa20.35■□□□□ 0.85
ABCD4-219ENST00000553745 CLTCQ00610 1675 aaKnown RBP20.34■□□□□ 0.85
ABCD4-219ENST00000553745 TRPM2O94759 1503 aa20.33■□□□□ 0.84
ABCD4-219ENST00000553745 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.84
ABCD4-219ENST00000553745 CFAP65Q6ZU64 1925 aaKnown RBP20.32■□□□□ 0.84
ABCD4-219ENST00000553745 NPATQ14207 1427 aa20.31■□□□□ 0.84
ABCD4-219ENST00000553745 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
ABCD4-219ENST00000553745 CCDC144AA2RUR9 1427 aa20.29■□□□□ 0.84
ABCD4-219ENST00000553745 PTPRTO14522 1441 aa20.29■□□□□ 0.84
ABCD4-219ENST00000553745 CLTCL1P53675 1640 aa20.29■□□□□ 0.84
ABCD4-219ENST00000553745 MLECQ14165 292 aa20.29■□□□□ 0.84
ABCD4-219ENST00000553745 ARID4BQ4LE39 1312 aaPredicted RBP20.28■□□□□ 0.84
ABCD4-219ENST00000553745 ARHGAP31Q2M1Z3 1444 aa20.26■□□□□ 0.83
ABCD4-219ENST00000553745 PREX1Q8TCU6 1659 aa20.26■□□□□ 0.83
ABCD4-219ENST00000553745 TIMELESSQ9UNS1 1208 aa20.25■□□□□ 0.83
ABCD4-219ENST00000553745 UGGT1Q9NYU2 1555 aa20.25■□□□□ 0.83
ABCD4-219ENST00000553745 FER1L4A9Z1Z3 1794 aa20.24■□□□□ 0.83
ABCD4-219ENST00000553745 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
ABCD4-219ENST00000553745 SYNMO15061 1565 aa20.22■□□□□ 0.83
ABCD4-219ENST00000553745 MROH2AA6NES4 1674 aa20.21■□□□□ 0.83
ABCD4-219ENST00000553745 NOS1P29475 1434 aa20.21■□□□□ 0.83
ABCD4-219ENST00000553745 CNTLNQ9NXG0 1405 aa20.21■□□□□ 0.83
ABCD4-219ENST00000553745 KIF1BO60333 1816 aa20.2■□□□□ 0.82
ABCD4-219ENST00000553745 PIK3C2BO00750 1634 aa20.19■□□□□ 0.82
ABCD4-219ENST00000553745 L3MBTL2Q969R5 705 aa20.18■□□□□ 0.82
ABCD4-219ENST00000553745 ERVK-7P63135 1459 aa20.17■□□□□ 0.82
ABCD4-219ENST00000553745 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
ABCD4-219ENST00000553745 SPATA31D1Q6ZQQ2 1576 aa20.15■□□□□ 0.82
ABCD4-219ENST00000553745 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
ABCD4-219ENST00000553745 MADDQ8WXG6 1647 aa20.14■□□□□ 0.82
ABCD4-219ENST00000553745 ESF1Q9H501 851 aaKnown RBP20.14■□□□□ 0.81
ABCD4-219ENST00000553745 C3P01024 1663 aa20.14■□□□□ 0.81
ABCD4-219ENST00000553745 NEURL4Q96JN8 1562 aa20.14■□□□□ 0.81
ABCD4-219ENST00000553745 ADGRB3O60242 1522 aa20.13■□□□□ 0.81
ABCD4-219ENST00000553745 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
ABCD4-219ENST00000553745 ADAMTSL3P82987 1691 aa20.12■□□□□ 0.81
ABCD4-219ENST00000553745 RIMS1Q86UR5 1692 aaKnown RBP20.11■□□□□ 0.81
ABCD4-219ENST00000553745 FBXO31Q5XUX0 539 aaPredicted RBP20.11■□□□□ 0.81
ABCD4-219ENST00000553745 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
ABCD4-219ENST00000553745 MYO5BQ9ULV0 1848 aa20.1■□□□□ 0.81
ABCD4-219ENST00000553745 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
ABCD4-219ENST00000553745 TMEM131LA2VDJ0 1609 aa20.05■□□□□ 0.8
ABCD4-219ENST00000553745 UHRF1BP1Q6BDS2 1440 aa20.05■□□□□ 0.8
ABCD4-219ENST00000553745 PPLO60437 1756 aa20.05■□□□□ 0.8
ABCD4-219ENST00000553745 DCAF11Q8TEB1 546 aa20.04■□□□□ 0.8
ABCD4-219ENST00000553745 NBPF8Q3BBV2 869 aa20.03■□□□□ 0.8
ABCD4-219ENST00000553745 MIER1Q8N108 512 aa20.03■□□□□ 0.8
ABCD4-219ENST00000553745 IDI1Q13907 227 aa20.02■□□□□ 0.8
ABCD4-219ENST00000553745 SLC52A1Q9NWF4 448 aa20.02■□□□□ 0.8
ABCD4-219ENST00000553745 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
ABCD4-219ENST00000553745 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
ABCD4-219ENST00000553745 TRPM1Q7Z4N2 1603 aa20.01■□□□□ 0.79
ABCD4-219ENST00000553745 PRAG1Q86YV5 1406 aa20.01■□□□□ 0.79
ABCD4-219ENST00000553745 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
ABCD4-219ENST00000553745 TNRQ92752 1358 aa20■□□□□ 0.79
ABCD4-219ENST00000553745 CEBPAP49715 358 aaPredicted RBP20■□□□□ 0.79
ABCD4-219ENST00000553745 MYOM2P54296 1465 aa19.99■□□□□ 0.79
ABCD4-219ENST00000553745 NEXMIFQ5QGS0 1516 aa19.99■□□□□ 0.79
ABCD4-219ENST00000553745 RALGAPBQ86X10 1494 aa19.98■□□□□ 0.79
ABCD4-219ENST00000553745 MYO3AQ8NEV4 1616 aa19.97■□□□□ 0.79
ABCD4-219ENST00000553745 UBR1Q8IWV7 1749 aa19.96■□□□□ 0.79
ABCD4-219ENST00000553745 KDM5AP29375 1690 aaKnown RBP19.96■□□□□ 0.79
ABCD4-219ENST00000553745 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms