RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 MAGI2Q86UL8 1455 aa20.15■□□□□ 0.82
APEX1-205ENST00000553555 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.81
APEX1-205ENST00000553555 DEPDC5O75140 1603 aa20.12■□□□□ 0.81
APEX1-205ENST00000553555 YEATS2Q9ULM3 1422 aa20.12■□□□□ 0.81
APEX1-205ENST00000553555 IQGAP3Q86VI3 1631 aa20.11■□□□□ 0.81
APEX1-205ENST00000553555 KIF3BO15066 747 aa20.1■□□□□ 0.81
APEX1-205ENST00000553555 BCORL1Q5H9F3 1711 aa20.1■□□□□ 0.81
APEX1-205ENST00000553555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.811e-8■□□□□ 10
APEX1-205ENST00000553555 FAM135AQ9P2D6 1515 aa20.09■□□□□ 0.81
APEX1-205ENST00000553555 RNF17Q9BXT8 1623 aaKnown RBP20.06■□□□□ 0.8
APEX1-205ENST00000553555 PKD2Q13563 968 aa20.06■□□□□ 0.8
APEX1-205ENST00000553555 FOXD1Q16676 465 aa20.06■□□□□ 0.8
APEX1-205ENST00000553555 SIN3AQ96ST3 1273 aa20.06■□□□□ 0.8
APEX1-205ENST00000553555 ATP10AO60312 1499 aa20.06■□□□□ 0.8
APEX1-205ENST00000553555 MROH1Q8NDA8 1641 aa20.06■□□□□ 0.8
APEX1-205ENST00000553555 VWDEQ8N2E2 1590 aa20.04■□□□□ 0.8
APEX1-205ENST00000553555 ANKRD30BQ9BXX2 1392 aa20.04■□□□□ 0.8
APEX1-205ENST00000553555 PRDM15P57071 1507 aaPredicted RBP20.03■□□□□ 0.8
APEX1-205ENST00000553555 REREQ9P2R6 1566 aa20.03■□□□□ 0.8
APEX1-205ENST00000553555 KANK1Q14678 1352 aa20.02■□□□□ 0.8
APEX1-205ENST00000553555 NEUROD1Q13562 356 aa20.02■□□□□ 0.79
APEX1-205ENST00000553555 ARHGEF40Q8TER5 1519 aa20.01■□□□□ 0.79
APEX1-205ENST00000553555 TET3O43151 1660 aa19.98■□□□□ 0.79
APEX1-205ENST00000553555 GGT6Q6P531 493 aa19.98■□□□□ 0.79
APEX1-205ENST00000553555 AGLP35573 1532 aa19.97■□□□□ 0.79
APEX1-205ENST00000553555 CEP152O94986 1710 aa19.97■□□□□ 0.79
APEX1-205ENST00000553555 SIGLEC1Q9BZZ2 1709 aa19.96■□□□□ 0.79
APEX1-205ENST00000553555 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
APEX1-205ENST00000553555 E9PCH4 1651 aa19.96■□□□□ 0.79
APEX1-205ENST00000553555 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
APEX1-205ENST00000553555 RPRD2Q5VT52 1461 aaKnown RBP19.92■□□□□ 0.78
APEX1-205ENST00000553555 ABCC3O15438 1527 aa19.9■□□□□ 0.78
APEX1-205ENST00000553555 WASHC2CQ9Y4E1 1318 aa19.89■□□□□ 0.78
APEX1-205ENST00000553555 ZC3H13Q5T200 1668 aaKnown RBP19.89■□□□□ 0.78
APEX1-205ENST00000553555 PLA2R1Q13018 1463 aa19.89■□□□□ 0.77
APEX1-205ENST00000553555 EFCAB6Q5THR3 1501 aa19.89■□□□□ 0.77
APEX1-205ENST00000553555 CFAP65Q6ZU64 1925 aaKnown RBP19.89■□□□□ 0.77
APEX1-205ENST00000553555 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
APEX1-205ENST00000553555 SPHKAPQ2M3C7 1700 aa19.88■□□□□ 0.77
APEX1-205ENST00000553555 PPP6R1Q9UPN7 881 aa19.87■□□□□ 0.77
APEX1-205ENST00000553555 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
APEX1-205ENST00000553555 PTPRTO14522 1441 aa19.85■□□□□ 0.77
APEX1-205ENST00000553555 PPP1R15AO75807 674 aaPredicted RBP19.84■□□□□ 0.77
APEX1-205ENST00000553555 CCDC144AA2RUR9 1427 aa19.83■□□□□ 0.76
APEX1-205ENST00000553555 TRPM2O94759 1503 aa19.82■□□□□ 0.76
APEX1-205ENST00000553555 NPATQ14207 1427 aa19.81■□□□□ 0.76
APEX1-205ENST00000553555 ARHGAP31Q2M1Z3 1444 aa19.81■□□□□ 0.76
APEX1-205ENST00000553555 CLTCQ00610 1675 aaKnown RBP19.8■□□□□ 0.76
APEX1-205ENST00000553555 ARID4BQ4LE39 1312 aaPredicted RBP19.8■□□□□ 0.76
APEX1-205ENST00000553555 MLECQ14165 292 aa19.8■□□□□ 0.76
APEX1-205ENST00000553555 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
APEX1-205ENST00000553555 CLTCL1P53675 1640 aa19.77■□□□□ 0.76
APEX1-205ENST00000553555 NOS1P29475 1434 aa19.74■□□□□ 0.75
APEX1-205ENST00000553555 KIF1BO60333 1816 aa19.74■□□□□ 0.75
APEX1-205ENST00000553555 CNTLNQ9NXG0 1405 aa19.73■□□□□ 0.75
APEX1-205ENST00000553555 PREX1Q8TCU6 1659 aa19.73■□□□□ 0.75
APEX1-205ENST00000553555 ESF1Q9H501 851 aaKnown RBP19.71■□□□□ 0.75
APEX1-205ENST00000553555 UGGT1Q9NYU2 1555 aa19.7■□□□□ 0.74
APEX1-205ENST00000553555 SPATA31E1Q6ZUB1 1445 aa19.7■□□□□ 0.74
APEX1-205ENST00000553555 SYNMO15061 1565 aa19.7■□□□□ 0.74
APEX1-205ENST00000553555 MROH2AA6NES4 1674 aa19.69■□□□□ 0.74
APEX1-205ENST00000553555 NEURL4Q96JN8 1562 aa19.68■□□□□ 0.74
APEX1-205ENST00000553555 PIK3C2BO00750 1634 aa19.68■□□□□ 0.74
APEX1-205ENST00000553555 RGL3Q3MIN7 710 aa19.68■□□□□ 0.74
APEX1-205ENST00000553555 ZMYM3Q14202 1370 aa19.67■□□□□ 0.74
APEX1-205ENST00000553555 FER1L4A9Z1Z3 1794 aa19.67■□□□□ 0.74
APEX1-205ENST00000553555 FBXO31Q5XUX0 539 aaPredicted RBP19.66■□□□□ 0.74
APEX1-205ENST00000553555 ERVK-7P63135 1459 aa19.66■□□□□ 0.74
APEX1-205ENST00000553555 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
APEX1-205ENST00000553555 NBPF8Q3BBV2 869 aa19.65■□□□□ 0.74
APEX1-205ENST00000553555 SPATA31D1Q6ZQQ2 1576 aa19.65■□□□□ 0.74
APEX1-205ENST00000553555 SLC52A1Q9NWF4 448 aa19.63■□□□□ 0.73
APEX1-205ENST00000553555 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
APEX1-205ENST00000553555 UHRF1BP1Q6BDS2 1440 aa19.63■□□□□ 0.73
APEX1-205ENST00000553555 ADGRB3O60242 1522 aa19.61■□□□□ 0.73
APEX1-205ENST00000553555 IDI1Q13907 227 aa19.61■□□□□ 0.73
APEX1-205ENST00000553555 MYO5BQ9ULV0 1848 aa19.59■□□□□ 0.73
APEX1-205ENST00000553555 IFT172Q9UG01 1749 aa19.59■□□□□ 0.73
APEX1-205ENST00000553555 C3P01024 1663 aa19.59■□□□□ 0.73
APEX1-205ENST00000553555 CHGAP10645 457 aaKnown RBP19.58■□□□□ 0.73
APEX1-205ENST00000553555 STAC3Q96MF2 364 aa19.58■□□□□ 0.73
APEX1-205ENST00000553555 ADAMTSL3P82987 1691 aa19.58■□□□□ 0.72
APEX1-205ENST00000553555 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.72
APEX1-205ENST00000553555 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
APEX1-205ENST00000553555 MADDQ8WXG6 1647 aa19.56■□□□□ 0.72
APEX1-205ENST00000553555 PRAG1Q86YV5 1406 aa19.56■□□□□ 0.72
APEX1-205ENST00000553555 TMEM131LA2VDJ0 1609 aa19.56■□□□□ 0.72
APEX1-205ENST00000553555 PPLO60437 1756 aa19.55■□□□□ 0.72
APEX1-205ENST00000553555 RIMS1Q86UR5 1692 aaKnown RBP19.55■□□□□ 0.72
APEX1-205ENST00000553555 CEBPAP49715 358 aaPredicted RBP19.54■□□□□ 0.72
APEX1-205ENST00000553555 RPGRIP1LQ68CZ1 1315 aa19.53■□□□□ 0.72
APEX1-205ENST00000553555 TRPM1Q7Z4N2 1603 aa19.53■□□□□ 0.72
APEX1-205ENST00000553555 TNRQ92752 1358 aa19.53■□□□□ 0.72
APEX1-205ENST00000553555 RALGAPBQ86X10 1494 aa19.53■□□□□ 0.72
APEX1-205ENST00000553555 MYOM2P54296 1465 aa19.51■□□□□ 0.71
APEX1-205ENST00000553555 NEXMIFQ5QGS0 1516 aa19.48■□□□□ 0.71
APEX1-205ENST00000553555 STAG3Q9UJ98 1225 aa19.47■□□□□ 0.71
APEX1-205ENST00000553555 KDM5AP29375 1690 aaKnown RBP19.47■□□□□ 0.71
APEX1-205ENST00000553555 NRXN1Q9ULB1 1477 aa19.47■□□□□ 0.71
APEX1-205ENST00000553555 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms