RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 SLC4A1APQ9BWU0 796 aaKnown RBP25.71■■□□□ 1.71
PSEN1-206ENST00000553447 A2MP01023 1474 aa25.71■■□□□ 1.71
PSEN1-206ENST00000553447 FAM135AQ9P2D6 1515 aa25.69■■□□□ 1.7
PSEN1-206ENST00000553447 BCORL1Q5H9F3 1711 aa25.68■■□□□ 1.7
PSEN1-206ENST00000553447 RNF17Q9BXT8 1623 aaKnown RBP25.64■■□□□ 1.7
PSEN1-206ENST00000553447 SIN3AQ96ST3 1273 aa25.64■■□□□ 1.7
PSEN1-206ENST00000553447 COL17A1Q9UMD9 1497 aaPredicted RBP25.64■■□□□ 1.69
PSEN1-206ENST00000553447 MROH1Q8NDA8 1641 aa25.63■■□□□ 1.69
PSEN1-206ENST00000553447 YEATS2Q9ULM3 1422 aa25.63■■□□□ 1.69
PSEN1-206ENST00000553447 PRDM15P57071 1507 aaPredicted RBP25.62■■□□□ 1.69
PSEN1-206ENST00000553447 ANKRD30BQ9BXX2 1392 aa25.61■■□□□ 1.69
PSEN1-206ENST00000553447 TRHP20396 242 aaPredicted RBP25.61■■□□□ 1.69
PSEN1-206ENST00000553447 FOXD1Q16676 465 aa25.61■■□□□ 1.69
PSEN1-206ENST00000553447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.61■■□□□ 1.692e-7■□□□□ 10.6
PSEN1-206ENST00000553447 PKD2Q13563 968 aa25.6■■□□□ 1.69
PSEN1-206ENST00000553447 VWDEQ8N2E2 1590 aa25.6■■□□□ 1.69
PSEN1-206ENST00000553447 KIF3BO15066 747 aa25.59■■□□□ 1.69
PSEN1-206ENST00000553447 NEUROD1Q13562 356 aa25.59■■□□□ 1.69
PSEN1-206ENST00000553447 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
PSEN1-206ENST00000553447 TET3O43151 1660 aa25.55■■□□□ 1.68
PSEN1-206ENST00000553447 ATP10AO60312 1499 aa25.54■■□□□ 1.68
PSEN1-206ENST00000553447 ARHGEF40Q8TER5 1519 aa25.54■■□□□ 1.68
PSEN1-206ENST00000553447 TIMELESSQ9UNS1 1208 aa25.54■■□□□ 1.68
PSEN1-206ENST00000553447 KANK1Q14678 1352 aa25.54■■□□□ 1.68
PSEN1-206ENST00000553447 E9PCH4 1651 aa25.52■■□□□ 1.68
PSEN1-206ENST00000553447 CEP152O94986 1710 aa25.51■■□□□ 1.68
PSEN1-206ENST00000553447 RPRD2Q5VT52 1461 aaKnown RBP25.5■■□□□ 1.67
PSEN1-206ENST00000553447 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
PSEN1-206ENST00000553447 LMTK2Q8IWU2 1503 aa25.47■■□□□ 1.67
PSEN1-206ENST00000553447 AGLP35573 1532 aa25.46■■□□□ 1.67
PSEN1-206ENST00000553447 SIGLEC1Q9BZZ2 1709 aa25.44■■□□□ 1.66
PSEN1-206ENST00000553447 SPHKAPQ2M3C7 1700 aa25.43■■□□□ 1.66
PSEN1-206ENST00000553447 EFCAB6Q5THR3 1501 aa25.43■■□□□ 1.66
PSEN1-206ENST00000553447 ZC3H13Q5T200 1668 aaKnown RBP25.43■■□□□ 1.66
PSEN1-206ENST00000553447 ABCC3O15438 1527 aa25.41■■□□□ 1.66
PSEN1-206ENST00000553447 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
PSEN1-206ENST00000553447 GGT6Q6P531 493 aa25.4■■□□□ 1.66
PSEN1-206ENST00000553447 CAMSAP1Q5T5Y3 1602 aa25.39■■□□□ 1.66
PSEN1-206ENST00000553447 TRPM2O94759 1503 aa25.36■■□□□ 1.65
PSEN1-206ENST00000553447 PPP1R15AO75807 674 aaPredicted RBP25.35■■□□□ 1.65
PSEN1-206ENST00000553447 CCDC144AA2RUR9 1427 aa25.35■■□□□ 1.65
PSEN1-206ENST00000553447 PTPRTO14522 1441 aa25.34■■□□□ 1.65
PSEN1-206ENST00000553447 WASHC2CQ9Y4E1 1318 aa25.32■■□□□ 1.64
PSEN1-206ENST00000553447 L3MBTL2Q969R5 705 aa25.3■■□□□ 1.64
PSEN1-206ENST00000553447 CLTCL1P53675 1640 aa25.29■■□□□ 1.64
PSEN1-206ENST00000553447 NPATQ14207 1427 aa25.28■■□□□ 1.64
PSEN1-206ENST00000553447 CFAP65Q6ZU64 1925 aaKnown RBP25.27■■□□□ 1.64
PSEN1-206ENST00000553447 CLTCQ00610 1675 aaKnown RBP25.26■■□□□ 1.63
PSEN1-206ENST00000553447 PPP6R1Q9UPN7 881 aa25.26■■□□□ 1.63
PSEN1-206ENST00000553447 ARHGAP31Q2M1Z3 1444 aa25.26■■□□□ 1.63
PSEN1-206ENST00000553447 KIF1BO60333 1816 aa25.21■■□□□ 1.63
PSEN1-206ENST00000553447 CNTLNQ9NXG0 1405 aa25.2■■□□□ 1.62
PSEN1-206ENST00000553447 PREX1Q8TCU6 1659 aa25.2■■□□□ 1.62
PSEN1-206ENST00000553447 NEURL4Q96JN8 1562 aa25.18■■□□□ 1.62
PSEN1-206ENST00000553447 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
PSEN1-206ENST00000553447 NOS1P29475 1434 aa25.18■■□□□ 1.62
PSEN1-206ENST00000553447 SPATA31E1Q6ZUB1 1445 aa25.17■■□□□ 1.62
PSEN1-206ENST00000553447 SYNMO15061 1565 aa25.16■■□□□ 1.62
PSEN1-206ENST00000553447 MLECQ14165 292 aa25.16■■□□□ 1.62
PSEN1-206ENST00000553447 ARID4BQ4LE39 1312 aaPredicted RBP25.15■■□□□ 1.62
PSEN1-206ENST00000553447 PIK3C2BO00750 1634 aa25.15■■□□□ 1.62
PSEN1-206ENST00000553447 ZNF316A6NFI3 1004 aaPredicted RBP25.13■■□□□ 1.61
PSEN1-206ENST00000553447 MROH2AA6NES4 1674 aa25.13■■□□□ 1.61
PSEN1-206ENST00000553447 UHRF1BP1Q6BDS2 1440 aa25.12■■□□□ 1.61
PSEN1-206ENST00000553447 NBPF8Q3BBV2 869 aa25.11■■□□□ 1.61
PSEN1-206ENST00000553447 RGL3Q3MIN7 710 aa25.09■■□□□ 1.61
PSEN1-206ENST00000553447 DCAF11Q8TEB1 546 aa25.09■■□□□ 1.61
PSEN1-206ENST00000553447 ERVK-7P63135 1459 aa25.09■■□□□ 1.61
PSEN1-206ENST00000553447 ADGRB3O60242 1522 aa25.08■■□□□ 1.61
PSEN1-206ENST00000553447 IFT172Q9UG01 1749 aa25.07■■□□□ 1.6
PSEN1-206ENST00000553447 FER1L4A9Z1Z3 1794 aa25.07■■□□□ 1.6
PSEN1-206ENST00000553447 SPATA31D1Q6ZQQ2 1576 aa25.06■■□□□ 1.6
PSEN1-206ENST00000553447 ESF1Q9H501 851 aaKnown RBP25.06■■□□□ 1.6
PSEN1-206ENST00000553447 KDM2AQ9Y2K7 1162 aa25.04■■□□□ 1.6
PSEN1-206ENST00000553447 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
PSEN1-206ENST00000553447 RALGAPBQ86X10 1494 aa25.02■■□□□ 1.6
PSEN1-206ENST00000553447 TRPM1Q7Z4N2 1603 aa25.02■■□□□ 1.6
PSEN1-206ENST00000553447 ZMYM3Q14202 1370 aa25.02■■□□□ 1.6
PSEN1-206ENST00000553447 ZNF326Q5BKZ1 582 aaKnown RBP25.01■■□□□ 1.59
PSEN1-206ENST00000553447 FBXO31Q5XUX0 539 aaPredicted RBP25■■□□□ 1.59
PSEN1-206ENST00000553447 MADDQ8WXG6 1647 aa25■■□□□ 1.59
PSEN1-206ENST00000553447 PPLO60437 1756 aa25■■□□□ 1.59
PSEN1-206ENST00000553447 MYO5BQ9ULV0 1848 aa25■■□□□ 1.59
PSEN1-206ENST00000553447 SLC52A1Q9NWF4 448 aa24.99■■□□□ 1.59
PSEN1-206ENST00000553447 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
PSEN1-206ENST00000553447 C3P01024 1663 aa24.97■■□□□ 1.59
PSEN1-206ENST00000553447 TMEM131LA2VDJ0 1609 aa24.97■■□□□ 1.59
PSEN1-206ENST00000553447 MYOM2P54296 1465 aa24.96■■□□□ 1.59
PSEN1-206ENST00000553447 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
PSEN1-206ENST00000553447 IDI1Q13907 227 aa24.95■■□□□ 1.58
PSEN1-206ENST00000553447 KIAA1210Q9ULL0 1709 aa24.92■■□□□ 1.58
PSEN1-206ENST00000553447 LAMC1P11047 1609 aa24.91■■□□□ 1.58
PSEN1-206ENST00000553447 ADAMTSL3P82987 1691 aa24.91■■□□□ 1.58
PSEN1-206ENST00000553447 RPGRIP1LQ68CZ1 1315 aa24.9■■□□□ 1.58
PSEN1-206ENST00000553447 NEXMIFQ5QGS0 1516 aa24.9■■□□□ 1.58
PSEN1-206ENST00000553447 RIMS1Q86UR5 1692 aaKnown RBP24.89■■□□□ 1.58
PSEN1-206ENST00000553447 EIF4G2P78344 907 aaKnown RBP eCLIP24.89■■□□□ 1.58
PSEN1-206ENST00000553447 NRXN1Q9ULB1 1477 aa24.88■■□□□ 1.57
PSEN1-206ENST00000553447 TNRQ92752 1358 aa24.87■■□□□ 1.57
PSEN1-206ENST00000553447 ROCK2O75116 1388 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms