RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
HDAC7-230ENST00000552960 NOP58Q9Y2X3 529 aaKnown RBP16.76■□□□□ 0.27
HDAC7-230ENST00000552960 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
HDAC7-230ENST00000552960 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
HDAC7-230ENST00000552960 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
HDAC7-230ENST00000552960 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
HDAC7-230ENST00000552960 ZBED9Q6R2W3 1325 aa16.74■□□□□ 0.27
HDAC7-230ENST00000552960 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
HDAC7-230ENST00000552960 NPM1P06748 294 aaKnown RBP eCLIP16.74■□□□□ 0.27
HDAC7-230ENST00000552960 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
HDAC7-230ENST00000552960 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
HDAC7-230ENST00000552960 RSPH4AQ5TD94 716 aa16.71■□□□□ 0.27
HDAC7-230ENST00000552960 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
HDAC7-230ENST00000552960 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
HDAC7-230ENST00000552960 ANP32AP39687 249 aaKnown RBP16.7■□□□□ 0.26
HDAC7-230ENST00000552960 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
HDAC7-230ENST00000552960 FANCAO15360 1455 aa16.69■□□□□ 0.26
HDAC7-230ENST00000552960 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
HDAC7-230ENST00000552960 ABCC1P33527 1531 aa16.69■□□□□ 0.26
HDAC7-230ENST00000552960 SPAG9O60271 1321 aaKnown RBP16.68■□□□□ 0.26
HDAC7-230ENST00000552960 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
HDAC7-230ENST00000552960 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
HDAC7-230ENST00000552960 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
HDAC7-230ENST00000552960 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
HDAC7-230ENST00000552960 TEX14Q8IWB6 1497 aa16.66■□□□□ 0.26
HDAC7-230ENST00000552960 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
HDAC7-230ENST00000552960 RTN4Q9NQC3 1192 aaKnown RBP16.65■□□□□ 0.26
HDAC7-230ENST00000552960 ZBTB47Q9UFB7 747 aaPredicted RBP16.65■□□□□ 0.26
HDAC7-230ENST00000552960 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
HDAC7-230ENST00000552960 FAM135AQ9P2D6 1515 aa16.63■□□□□ 0.25
HDAC7-230ENST00000552960 ADGRL1O94910 1474 aa16.63■□□□□ 0.25
HDAC7-230ENST00000552960 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
HDAC7-230ENST00000552960 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
HDAC7-230ENST00000552960 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
HDAC7-230ENST00000552960 RAPGEF3O95398 923 aa16.6■□□□□ 0.25
HDAC7-230ENST00000552960 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
HDAC7-230ENST00000552960 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
HDAC7-230ENST00000552960 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
HDAC7-230ENST00000552960 IPO9Q96P70 1041 aaKnown RBP16.59■□□□□ 0.25
HDAC7-230ENST00000552960 PLA2R1Q13018 1463 aa16.58■□□□□ 0.24
HDAC7-230ENST00000552960 KIF3BO15066 747 aa16.58■□□□□ 0.24
HDAC7-230ENST00000552960 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
HDAC7-230ENST00000552960 KDM5DQ9BY66 1539 aa16.57■□□□□ 0.24
HDAC7-230ENST00000552960 PLXNC1O60486 1568 aa16.56■□□□□ 0.24
HDAC7-230ENST00000552960 DUOX2Q9NRD8 1548 aa16.56■□□□□ 0.24
HDAC7-230ENST00000552960 LAS1LQ9Y4W2 734 aaKnown RBP16.55■□□□□ 0.24
HDAC7-230ENST00000552960 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
HDAC7-230ENST00000552960 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
HDAC7-230ENST00000552960 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
HDAC7-230ENST00000552960 ARAP3Q8WWN8 1544 aa16.53■□□□□ 0.24
HDAC7-230ENST00000552960 ERBINQ96RT1 1412 aa16.52■□□□□ 0.24
HDAC7-230ENST00000552960 ATP7AQ04656 1500 aa16.52■□□□□ 0.24
HDAC7-230ENST00000552960 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
HDAC7-230ENST00000552960 UNC13BO14795 1591 aa16.51■□□□□ 0.23
HDAC7-230ENST00000552960 CCDC144AA2RUR9 1427 aa16.5■□□□□ 0.23
HDAC7-230ENST00000552960 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
HDAC7-230ENST00000552960 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
HDAC7-230ENST00000552960 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
HDAC7-230ENST00000552960 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
HDAC7-230ENST00000552960 RTEL1-TNFRSF6BF6WH68 1400 aa16.49■□□□□ 0.23
HDAC7-230ENST00000552960 USP47Q96K76 1375 aa16.49■□□□□ 0.23
HDAC7-230ENST00000552960 NBPF1Q3BBV0 1214 aa16.48■□□□□ 0.23
HDAC7-230ENST00000552960 GGT6Q6P531 493 aa16.48■□□□□ 0.23
HDAC7-230ENST00000552960 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
HDAC7-230ENST00000552960 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-230ENST00000552960 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-230ENST00000552960 CARD11Q9BXL7 1154 aa16.47■□□□□ 0.23
HDAC7-230ENST00000552960 IQGAP3Q86VI3 1631 aa16.46■□□□□ 0.23
HDAC7-230ENST00000552960 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.22
HDAC7-230ENST00000552960 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.22
HDAC7-230ENST00000552960 MAGI2Q86UL8 1455 aa16.45■□□□□ 0.22
HDAC7-230ENST00000552960 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
HDAC7-230ENST00000552960 NEFMP07197 916 aa16.45■□□□□ 0.22
HDAC7-230ENST00000552960 POGZQ7Z3K3 1410 aa16.44■□□□□ 0.22
HDAC7-230ENST00000552960 ZNF518AQ6AHZ1 1483 aa16.44■□□□□ 0.22
HDAC7-230ENST00000552960 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
HDAC7-230ENST00000552960 ST20-MTHFSA0A0A6YYL1 179 aa16.41■□□□□ 0.22
HDAC7-230ENST00000552960 A2MP01023 1474 aa16.41■□□□□ 0.22
HDAC7-230ENST00000552960 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
HDAC7-230ENST00000552960 RCAN3Q9UKA8 241 aa16.41■□□□□ 0.22
HDAC7-230ENST00000552960 PLIN1O60240 522 aa16.41■□□□□ 0.22
HDAC7-230ENST00000552960 E9PCH4 1651 aa16.4■□□□□ 0.22
HDAC7-230ENST00000552960 PDE4AP27815 886 aa16.4■□□□□ 0.22
HDAC7-230ENST00000552960 UGGT1Q9NYU2 1555 aa16.4■□□□□ 0.22
HDAC7-230ENST00000552960 ATP10AO60312 1499 aa16.4■□□□□ 0.22
HDAC7-230ENST00000552960 RNF123Q5XPI4 1314 aa16.4■□□□□ 0.22
HDAC7-230ENST00000552960 YEATS2Q9ULM3 1422 aa16.38■□□□□ 0.21
HDAC7-230ENST00000552960 MROH1Q8NDA8 1641 aa16.38■□□□□ 0.21
HDAC7-230ENST00000552960 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
HDAC7-230ENST00000552960 UHRF1BP1Q6BDS2 1440 aa16.38■□□□□ 0.21
HDAC7-230ENST00000552960 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
HDAC7-230ENST00000552960 CDCA7LQ96GN5 454 aa16.37■□□□□ 0.21
HDAC7-230ENST00000552960 TSPOAP1O95153 1857 aa16.36■□□□□ 0.21
HDAC7-230ENST00000552960 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
HDAC7-230ENST00000552960 PRAG1Q86YV5 1406 aa16.36■□□□□ 0.21
HDAC7-230ENST00000552960 KDM5CP41229 1560 aa16.35■□□□□ 0.21
HDAC7-230ENST00000552960 KANK1Q14678 1352 aa16.35■□□□□ 0.21
HDAC7-230ENST00000552960 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
HDAC7-230ENST00000552960 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
HDAC7-230ENST00000552960 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms