RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 FBXO31Q5XUX0 539 aaPredicted RBP25.73■■□□□ 1.71
BRF1-219ENST00000551787 PREX1Q8TCU6 1659 aa25.73■■□□□ 1.71
BRF1-219ENST00000551787 MROH2AA6NES4 1674 aa25.72■■□□□ 1.71
BRF1-219ENST00000551787 PTPRKQ15262 1439 aa25.71■■□□□ 1.71
BRF1-219ENST00000551787 NPATQ14207 1427 aa25.71■■□□□ 1.71
BRF1-219ENST00000551787 ANKRD30AQ9BXX3 1397 aa25.7■■□□□ 1.71
BRF1-219ENST00000551787 DUOX2Q9NRD8 1548 aa25.7■■□□□ 1.7
BRF1-219ENST00000551787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.7■■□□□ 1.74e-6■■□□□ 14.4
BRF1-219ENST00000551787 ITGAEP38570 1179 aa25.69■■□□□ 1.7
BRF1-219ENST00000551787 CROCC2H7BZ55 1655 aa25.68■■□□□ 1.7
BRF1-219ENST00000551787 NCOA1Q15788 1441 aa25.67■■□□□ 1.7
BRF1-219ENST00000551787 KDM5DQ9BY66 1539 aa25.66■■□□□ 1.7
BRF1-219ENST00000551787 ERBINQ96RT1 1412 aa25.62■■□□□ 1.69
BRF1-219ENST00000551787 RNF17Q9BXT8 1623 aaKnown RBP25.61■■□□□ 1.69
BRF1-219ENST00000551787 EIF2AK4Q9P2K8 1649 aaKnown RBP25.6■■□□□ 1.69
BRF1-219ENST00000551787 ABCC3O15438 1527 aa25.6■■□□□ 1.69
BRF1-219ENST00000551787 PZPP20742 1482 aa25.59■■□□□ 1.69
BRF1-219ENST00000551787 TNRQ92752 1358 aa25.58■■□□□ 1.69
BRF1-219ENST00000551787 MROH1Q8NDA8 1641 aa25.58■■□□□ 1.69
BRF1-219ENST00000551787 ADGRL2O95490 1459 aa25.57■■□□□ 1.68
BRF1-219ENST00000551787 FAM135AQ9P2D6 1515 aa25.57■■□□□ 1.68
BRF1-219ENST00000551787 DMRT2Q9Y5R5 561 aa25.54■■□□□ 1.68
BRF1-219ENST00000551787 NCKAP5LQ9HCH0 1330 aa25.54■■□□□ 1.68
BRF1-219ENST00000551787 KANK1Q14678 1352 aa25.53■■□□□ 1.68
BRF1-219ENST00000551787 MYO3AQ8NEV4 1616 aa25.52■■□□□ 1.68
BRF1-219ENST00000551787 STRCQ7RTU9 1775 aa25.52■■□□□ 1.68
BRF1-219ENST00000551787 ANKRD50Q9ULJ7 1429 aa25.52■■□□□ 1.68
BRF1-219ENST00000551787 CEP170BQ9Y4F5 1589 aaPredicted RBP25.51■■□□□ 1.67
BRF1-219ENST00000551787 CAMSAP1Q5T5Y3 1602 aa25.51■■□□□ 1.67
BRF1-219ENST00000551787 ILDR1Q86SU0 546 aaPredicted RBP25.49■■□□□ 1.67
BRF1-219ENST00000551787 CEP152O94986 1710 aa25.49■■□□□ 1.67
BRF1-219ENST00000551787 A2ML1A8K2U0 1454 aa25.48■■□□□ 1.67
BRF1-219ENST00000551787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.48■■□□□ 1.675e-6■■■■■ 46.2
BRF1-219ENST00000551787 PRDM15P57071 1507 aaPredicted RBP25.47■■□□□ 1.67
BRF1-219ENST00000551787 ROCK1Q13464 1354 aa25.46■■□□□ 1.67
BRF1-219ENST00000551787 ZC3H13Q5T200 1668 aaKnown RBP25.46■■□□□ 1.67
BRF1-219ENST00000551787 ERVK-7P63135 1459 aa25.45■■□□□ 1.66
BRF1-219ENST00000551787 CFAP65Q6ZU64 1925 aaKnown RBP25.45■■□□□ 1.66
BRF1-219ENST00000551787 RRBP1Q9P2E9 1410 aaKnown RBP25.45■■□□□ 1.66
BRF1-219ENST00000551787 DEPDC5O75140 1603 aa25.44■■□□□ 1.66
BRF1-219ENST00000551787 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
BRF1-219ENST00000551787 PKD2Q13563 968 aa25.42■■□□□ 1.66
BRF1-219ENST00000551787 THEMISQ8N1K5 641 aaPredicted RBP25.42■■□□□ 1.66
BRF1-219ENST00000551787 PTPRTO14522 1441 aa25.41■■□□□ 1.66
BRF1-219ENST00000551787 SPATA31D1Q6ZQQ2 1576 aa25.4■■□□□ 1.66
BRF1-219ENST00000551787 ARHGAP31Q2M1Z3 1444 aa25.4■■□□□ 1.66
BRF1-219ENST00000551787 NLRP1Q9C000 1473 aa25.4■■□□□ 1.66
BRF1-219ENST00000551787 PLA2R1Q13018 1463 aa25.38■■□□□ 1.65
BRF1-219ENST00000551787 VWDEQ8N2E2 1590 aa25.37■■□□□ 1.65
BRF1-219ENST00000551787 CERKQ8TCT0 537 aa25.37■■□□□ 1.65
BRF1-219ENST00000551787 UGGT1Q9NYU2 1555 aa25.35■■□□□ 1.65
BRF1-219ENST00000551787 ANKLE2Q86XL3 938 aa25.35■■□□□ 1.65
BRF1-219ENST00000551787 LMTK2Q8IWU2 1503 aa25.35■■□□□ 1.65
BRF1-219ENST00000551787 IDI1Q13907 227 aa25.32■■□□□ 1.64
BRF1-219ENST00000551787 NUP155O75694 1391 aa25.31■■□□□ 1.64
BRF1-219ENST00000551787 FBXO41Q8TF61 875 aa25.31■■□□□ 1.64
BRF1-219ENST00000551787 STAG3Q9UJ98 1225 aa25.3■■□□□ 1.64
BRF1-219ENST00000551787 ZNF335Q9H4Z2 1342 aaPredicted RBP25.29■■□□□ 1.64
BRF1-219ENST00000551787 EFCAB6Q5THR3 1501 aa25.28■■□□□ 1.64
BRF1-219ENST00000551787 UNC13BO14795 1591 aa25.26■■□□□ 1.63
BRF1-219ENST00000551787 NOS1P29475 1434 aa25.25■■□□□ 1.63
BRF1-219ENST00000551787 NAIPQ13075 1403 aa25.24■■□□□ 1.63
BRF1-219ENST00000551787 TXNDC2Q86VQ3 553 aa25.24■■□□□ 1.63
BRF1-219ENST00000551787 LTKP29376 864 aa25.23■■□□□ 1.63
BRF1-219ENST00000551787 SLC52A1Q9NWF4 448 aa25.22■■□□□ 1.63
BRF1-219ENST00000551787 SYNMO15061 1565 aa25.22■■□□□ 1.63
BRF1-219ENST00000551787 NEURL4Q96JN8 1562 aa25.22■■□□□ 1.63
BRF1-219ENST00000551787 NPHP4O75161 1426 aaPredicted RBP25.2■■□□□ 1.63
BRF1-219ENST00000551787 UBR1Q8IWV7 1749 aa25.2■■□□□ 1.63
BRF1-219ENST00000551787 LTBP4Q8N2S1 1624 aa25.2■■□□□ 1.62
BRF1-219ENST00000551787 RPRD2Q5VT52 1461 aaKnown RBP25.2■■□□□ 1.62
BRF1-219ENST00000551787 TET3O43151 1660 aa25.2■■□□□ 1.62
BRF1-219ENST00000551787 PIK3C2BO00750 1634 aa25.19■■□□□ 1.62
BRF1-219ENST00000551787 TRIM52Q96A61 297 aa25.18■■□□□ 1.62
BRF1-219ENST00000551787 EID1Q9Y6B2 187 aa25.18■■□□□ 1.62
BRF1-219ENST00000551787 POLR1AO95602 1720 aaPredicted RBP25.17■■□□□ 1.62
BRF1-219ENST00000551787 IQGAP3Q86VI3 1631 aa25.16■■□□□ 1.62
BRF1-219ENST00000551787 CHGAP10645 457 aaKnown RBP25.16■■□□□ 1.62
BRF1-219ENST00000551787 TMEM2Q9UHN6 1383 aa25.16■■□□□ 1.62
BRF1-219ENST00000551787 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
BRF1-219ENST00000551787 MED14O60244 1454 aa25.15■■□□□ 1.62
BRF1-219ENST00000551787 HFM1A2PYH4 1435 aa25.14■■□□□ 1.62
BRF1-219ENST00000551787 SCAF11Q99590 1463 aaKnown RBP25.14■■□□□ 1.61
BRF1-219ENST00000551787 ARHGAP23Q9P227 1491 aa25.13■■□□□ 1.61
BRF1-219ENST00000551787 E9PCH4 1651 aa25.13■■□□□ 1.61
BRF1-219ENST00000551787 GCC2Q8IWJ2 1684 aa25.13■■□□□ 1.61
BRF1-219ENST00000551787 SLIT1O75093 1534 aa25.12■■□□□ 1.61
BRF1-219ENST00000551787 ADGRB3O60242 1522 aa25.07■■□□□ 1.6
BRF1-219ENST00000551787 IQGAP1P46940 1657 aa25.07■■□□□ 1.6
BRF1-219ENST00000551787 NUTM2DQ5VT03 806 aaPredicted RBP25.06■■□□□ 1.6
BRF1-219ENST00000551787 BCANQ96GW7 911 aa25.06■■□□□ 1.6
BRF1-219ENST00000551787 SLC26A8Q96RN1 970 aa25.05■■□□□ 1.6
BRF1-219ENST00000551787 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
BRF1-219ENST00000551787 UBAP1LF5GYI3 381 aa25.01■■□□□ 1.59
BRF1-219ENST00000551787 PPP1R15AO75807 674 aaPredicted RBP25.01■■□□□ 1.59
BRF1-219ENST00000551787 KDM5AP29375 1690 aaKnown RBP25.01■■□□□ 1.59
BRF1-219ENST00000551787 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
BRF1-219ENST00000551787 TMEM131LA2VDJ0 1609 aa25■■□□□ 1.59
BRF1-219ENST00000551787 HDGFP51858 240 aaKnown RBP24.99■■□□□ 1.59
BRF1-219ENST00000551787 FOXD1Q16676 465 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms