RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 STK25O00506 426 aa10.12□□□□□ -0.79
DEPDC4-209ENST00000550587 RGL2O15211 777 aa10.12□□□□□ -0.79
DEPDC4-209ENST00000550587 NLRP6P59044 892 aa10.12□□□□□ -0.79
DEPDC4-209ENST00000550587 ZNF710Q8N1W2 664 aa10.12□□□□□ -0.79
DEPDC4-209ENST00000550587 FBXO22Q8NEZ5 403 aa10.12□□□□□ -0.79
DEPDC4-209ENST00000550587 DOK7Q18PE1 504 aa10.11□□□□□ -0.79
DEPDC4-209ENST00000550587 TNIKQ9UKE5 1360 aa10.11□□□□□ -0.79
DEPDC4-209ENST00000550587 ADCY10Q96PN6 1610 aa10.11□□□□□ -0.79
DEPDC4-209ENST00000550587 MMRN1Q13201 1228 aa10.1□□□□□ -0.79
DEPDC4-209ENST00000550587 SPNS2Q8IVW8 549 aa10.1□□□□□ -0.79
DEPDC4-209ENST00000550587 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
DEPDC4-209ENST00000550587 DIP2BQ9P265 1576 aa10.09□□□□□ -0.79
DEPDC4-209ENST00000550587 KDM6BO15054 1643 aa10.09□□□□□ -0.79
DEPDC4-209ENST00000550587 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
DEPDC4-209ENST00000550587 FAM9AQ8IZU1 332 aaPredicted RBP10.09□□□□□ -0.79
DEPDC4-209ENST00000550587 TSPOAP1O95153 1857 aa10.08□□□□□ -0.8
DEPDC4-209ENST00000550587 KDM4FA0A1W2PPD8 638 aa10.07□□□□□ -0.8
DEPDC4-209ENST00000550587 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
DEPDC4-209ENST00000550587 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
DEPDC4-209ENST00000550587 PLB1Q6P1J6 1458 aa10.06□□□□□ -0.8
DEPDC4-209ENST00000550587 IQGAP2Q13576 1575 aa10.05□□□□□ -0.8
DEPDC4-209ENST00000550587 ABCC2Q92887 1545 aa10.05□□□□□ -0.8
DEPDC4-209ENST00000550587 FBXO41Q8TF61 875 aa10.04□□□□□ -0.8
DEPDC4-209ENST00000550587 ERBB3P21860 1342 aa10.04□□□□□ -0.8
DEPDC4-209ENST00000550587 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
DEPDC4-209ENST00000550587 ASXL2Q76L83 1435 aa10.03□□□□□ -0.8
DEPDC4-209ENST00000550587 UACAQ9BZF9 1416 aa10.03□□□□□ -0.8
DEPDC4-209ENST00000550587 EEA1Q15075 1411 aa10.02□□□□□ -0.81
DEPDC4-209ENST00000550587 UHRF1BP1LA0JNW5 1464 aa10.02□□□□□ -0.81
DEPDC4-209ENST00000550587 RAPGEF2Q9Y4G8 1499 aa10.02□□□□□ -0.81
DEPDC4-209ENST00000550587 GPR153Q6NV75 609 aa10□□□□□ -0.81
DEPDC4-209ENST00000550587 TEX14Q8IWB6 1497 aa9.99□□□□□ -0.81
DEPDC4-209ENST00000550587 LMTK3Q96Q04 1460 aa9.99□□□□□ -0.81
DEPDC4-209ENST00000550587 GLI2P10070 1586 aa9.99□□□□□ -0.81
DEPDC4-209ENST00000550587 VARS2Q5ST30 1063 aaKnown RBP9.98□□□□□ -0.81
DEPDC4-209ENST00000550587 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
DEPDC4-209ENST00000550587 DISP1Q96F81 1524 aa9.97□□□□□ -0.81
DEPDC4-209ENST00000550587 UGGT2Q9NYU1 1516 aa9.97□□□□□ -0.81
DEPDC4-209ENST00000550587 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
DEPDC4-209ENST00000550587 LOC105371045A0A1W2PR82 267 aa9.96□□□□□ -0.82
DEPDC4-209ENST00000550587 ARSIQ5FYB1 569 aa9.96□□□□□ -0.82
DEPDC4-209ENST00000550587 KHSRPQ92945 711 aaKnown RBP eCLIP9.96□□□□□ -0.82
DEPDC4-209ENST00000550587 GOLGA3Q08378 1498 aa9.96□□□□□ -0.82
DEPDC4-209ENST00000550587 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
DEPDC4-209ENST00000550587 SOCS7O14512 581 aa9.95□□□□□ -0.82
DEPDC4-209ENST00000550587 KIF3CO14782 793 aa9.95□□□□□ -0.82
DEPDC4-209ENST00000550587 PPP1R37O75864 691 aa9.95□□□□□ -0.82
DEPDC4-209ENST00000550587 KCNH8Q96L42 1107 aa9.95□□□□□ -0.82
DEPDC4-209ENST00000550587 EPRSP07814 1512 aaKnown RBP9.95□□□□□ -0.82
DEPDC4-209ENST00000550587 KIAA0556O60303 1618 aa9.93□□□□□ -0.82
DEPDC4-209ENST00000550587 ZCCHC11Q5TAX3 1644 aaKnown RBP9.93□□□□□ -0.82
DEPDC4-209ENST00000550587 WDR7Q9Y4E6 1490 aa9.92□□□□□ -0.82
DEPDC4-209ENST00000550587 MAP3K4Q9Y6R4 1608 aa9.92□□□□□ -0.82
DEPDC4-209ENST00000550587 HECW2Q9P2P5 1572 aa9.92□□□□□ -0.82
DEPDC4-209ENST00000550587 ADGRL1O94910 1474 aa9.91□□□□□ -0.82
DEPDC4-209ENST00000550587 CD109Q6YHK3 1445 aa9.9□□□□□ -0.82
DEPDC4-209ENST00000550587 PPRC1Q5VV67 1664 aaKnown RBP9.9□□□□□ -0.82
DEPDC4-209ENST00000550587 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.82
DEPDC4-209ENST00000550587 ZNF687Q8N1G0 1237 aa9.9□□□□□ -0.82
DEPDC4-209ENST00000550587 CFAP43Q8NDM7 1665 aa9.87□□□□□ -0.83
DEPDC4-209ENST00000550587 HS6ST3Q8IZP7 471 aa9.87□□□□□ -0.83
DEPDC4-209ENST00000550587 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
DEPDC4-209ENST00000550587 PRXQ9BXM0 1461 aa9.86□□□□□ -0.83
DEPDC4-209ENST00000550587 COL17A1Q9UMD9 1497 aaPredicted RBP9.86□□□□□ -0.83
DEPDC4-209ENST00000550587 KIF21BO75037 1637 aa9.86□□□□□ -0.83
DEPDC4-209ENST00000550587 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
DEPDC4-209ENST00000550587 P3H3Q8IVL6 736 aa9.86□□□□□ -0.83
DEPDC4-209ENST00000550587 MAGI3Q5TCQ9 1506 aa9.86□□□□□ -0.83
DEPDC4-209ENST00000550587 NUDT7P0C024 238 aa9.85□□□□□ -0.83
DEPDC4-209ENST00000550587 CHGAP10645 457 aaKnown RBP9.85□□□□□ -0.83
DEPDC4-209ENST00000550587 ARID3CA6NKF2 412 aa9.84□□□□□ -0.83
DEPDC4-209ENST00000550587 PHLDB1Q86UU1 1377 aa9.84□□□□□ -0.83
DEPDC4-209ENST00000550587 ABCA8O94911 1581 aa9.84□□□□□ -0.83
DEPDC4-209ENST00000550587 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
DEPDC4-209ENST00000550587 ILDR2Q71H61 639 aa9.83□□□□□ -0.84
DEPDC4-209ENST00000550587 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
DEPDC4-209ENST00000550587 SLC34A2O95436 690 aa9.8□□□□□ -0.84
DEPDC4-209ENST00000550587 LHX6Q9UPM6 363 aa9.8□□□□□ -0.84
DEPDC4-209ENST00000550587 ARAP3Q8WWN8 1544 aa9.79□□□□□ -0.84
DEPDC4-209ENST00000550587 PLEKHD1A6NEE1 506 aa9.79□□□□□ -0.84
DEPDC4-209ENST00000550587 RANGAP1P46060 587 aaPredicted RBP9.79□□□□□ -0.84
DEPDC4-209ENST00000550587 ARID4BQ4LE39 1312 aaPredicted RBP9.79□□□□□ -0.84
DEPDC4-209ENST00000550587 ATP10BO94823 1461 aa9.79□□□□□ -0.84
DEPDC4-209ENST00000550587 DISP3Q9P2K9 1392 aa9.78□□□□□ -0.84
DEPDC4-209ENST00000550587 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
DEPDC4-209ENST00000550587 ANKRD13DQ6ZTN6 518 aa9.78□□□□□ -0.84
DEPDC4-209ENST00000550587 RNF166Q96A37 237 aaPredicted RBP9.77□□□□□ -0.85
DEPDC4-209ENST00000550587 NEO1Q92859 1461 aa9.75□□□□□ -0.85
DEPDC4-209ENST00000550587 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
DEPDC4-209ENST00000550587 MYT1LQ9UL68 1186 aa9.75□□□□□ -0.85
DEPDC4-209ENST00000550587 ABCA9Q8IUA7 1624 aa9.74□□□□□ -0.85
DEPDC4-209ENST00000550587 RAPGEF6Q8TEU7 1601 aa9.74□□□□□ -0.85
DEPDC4-209ENST00000550587 FOXK1P85037 733 aa9.74□□□□□ -0.85
DEPDC4-209ENST00000550587 POTEEQ6S8J3 1075 aa9.74□□□□□ -0.85
DEPDC4-209ENST00000550587 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
DEPDC4-209ENST00000550587 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
DEPDC4-209ENST00000550587 DSG2Q14126 1118 aa9.73□□□□□ -0.85
DEPDC4-209ENST00000550587 AXIN2Q9Y2T1 843 aa9.73□□□□□ -0.85
DEPDC4-209ENST00000550587 LSM11P83369 360 aaKnown RBP eCLIP9.72□□□□□ -0.85
DEPDC4-209ENST00000550587 CEP162Q5TB80 1403 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms