RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 SIGLEC1Q9BZZ2 1709 aa15.25■□□□□ 0.03
RAB5C-207ENST00000550504 ARID4BQ4LE39 1312 aaPredicted RBP15.23■□□□□ 0.03
RAB5C-207ENST00000550504 GGT6Q6P531 493 aa15.23■□□□□ 0.03
RAB5C-207ENST00000550504 UNC13BO14795 1591 aa15.23■□□□□ 0.03
RAB5C-207ENST00000550504 NUP155O75694 1391 aa15.23■□□□□ 0.03
RAB5C-207ENST00000550504 BCORL1Q5H9F3 1711 aa15.22■□□□□ 0.03
RAB5C-207ENST00000550504 AGLP35573 1532 aa15.22■□□□□ 0.03
RAB5C-207ENST00000550504 MLECQ14165 292 aa15.21■□□□□ 0.03
RAB5C-207ENST00000550504 DEPDC5O75140 1603 aa15.21■□□□□ 0.02
RAB5C-207ENST00000550504 RNF17Q9BXT8 1623 aaKnown RBP15.21■□□□□ 0.02
RAB5C-207ENST00000550504 MROH1Q8NDA8 1641 aa15.2■□□□□ 0.02
RAB5C-207ENST00000550504 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
RAB5C-207ENST00000550504 KANK1Q14678 1352 aa15.19■□□□□ 0.02
RAB5C-207ENST00000550504 PRDM15P57071 1507 aaPredicted RBP15.18■□□□□ 0.02
RAB5C-207ENST00000550504 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
RAB5C-207ENST00000550504 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
RAB5C-207ENST00000550504 PZPP20742 1482 aa15.18■□□□□ 0.02
RAB5C-207ENST00000550504 KDM5DQ9BY66 1539 aa15.17■□□□□ 0.02
RAB5C-207ENST00000550504 FAM135AQ9P2D6 1515 aa15.17■□□□□ 0.02
RAB5C-207ENST00000550504 MPHOSPH9Q99550 1183 aa15.17■□□□□ 0.02
RAB5C-207ENST00000550504 IQGAP3Q86VI3 1631 aa15.17■□□□□ 0.02
RAB5C-207ENST00000550504 CCER1Q8TC90 406 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-207ENST00000550504 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
RAB5C-207ENST00000550504 WASHC2CQ9Y4E1 1318 aa15.15■□□□□ 0.02
RAB5C-207ENST00000550504 CEP152O94986 1710 aa15.14■□□□□ 0.01
RAB5C-207ENST00000550504 FOXD1Q16676 465 aa15.14■□□□□ 0.01
RAB5C-207ENST00000550504 PKD2Q13563 968 aa15.13■□□□□ 0.01
RAB5C-207ENST00000550504 ABCC3O15438 1527 aa15.12■□□□□ 0.01
RAB5C-207ENST00000550504 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
RAB5C-207ENST00000550504 TET3O43151 1660 aa15.1■□□□□ 0.01
RAB5C-207ENST00000550504 LMTK2Q8IWU2 1503 aa15.1■□□□□ 0.01
RAB5C-207ENST00000550504 ADAMTSL3P82987 1691 aa15.09■□□□□ 0.01
RAB5C-207ENST00000550504 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
RAB5C-207ENST00000550504 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
RAB5C-207ENST00000550504 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
RAB5C-207ENST00000550504 CAMSAP1Q5T5Y3 1602 aa15.09■□□□□ 0.01
RAB5C-207ENST00000550504 E9PCH4 1651 aa15.08■□□□□ 0
RAB5C-207ENST00000550504 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
RAB5C-207ENST00000550504 FER1L4A9Z1Z3 1794 aa15.06■□□□□ 0
RAB5C-207ENST00000550504 NPATQ14207 1427 aa15.04■□□□□ -0
RAB5C-207ENST00000550504 MADDQ8WXG6 1647 aa15.03■□□□□ -0
RAB5C-207ENST00000550504 CNTLNQ9NXG0 1405 aa15.03■□□□□ -0
RAB5C-207ENST00000550504 ZMYM3Q14202 1370 aa15.02■□□□□ -0
RAB5C-207ENST00000550504 CFAP65Q6ZU64 1925 aaKnown RBP15.02■□□□□ -0
RAB5C-207ENST00000550504 ANKRD30BQ9BXX2 1392 aa15.02■□□□□ -0
RAB5C-207ENST00000550504 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
RAB5C-207ENST00000550504 SIN3AQ96ST3 1273 aa15.02■□□□□ -0
RAB5C-207ENST00000550504 RIMS1Q86UR5 1692 aaKnown RBP15.02□□□□□ -0.01
RAB5C-207ENST00000550504 PTPRMP28827 1452 aa15.01□□□□□ -0.01
RAB5C-207ENST00000550504 ARHGAP31Q2M1Z3 1444 aa15.01□□□□□ -0.01
RAB5C-207ENST00000550504 NEUROD1Q13562 356 aa15.01□□□□□ -0.01
RAB5C-207ENST00000550504 FBXO31Q5XUX0 539 aaPredicted RBP15.01□□□□□ -0.01
RAB5C-207ENST00000550504 RPRD2Q5VT52 1461 aaKnown RBP15.01□□□□□ -0.01
RAB5C-207ENST00000550504 CLSPNQ9HAW4 1339 aa15□□□□□ -0.01
RAB5C-207ENST00000550504 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
RAB5C-207ENST00000550504 PLA2R1Q13018 1463 aa15□□□□□ -0.01
RAB5C-207ENST00000550504 SPHKAPQ2M3C7 1700 aa15□□□□□ -0.01
RAB5C-207ENST00000550504 MROH2AA6NES4 1674 aa15□□□□□ -0.01
RAB5C-207ENST00000550504 PREX1Q8TCU6 1659 aa14.98□□□□□ -0.01
RAB5C-207ENST00000550504 PTPRTO14522 1441 aa14.98□□□□□ -0.01
RAB5C-207ENST00000550504 C3P01024 1663 aa14.97□□□□□ -0.01
RAB5C-207ENST00000550504 ERVK-7P63135 1459 aa14.97□□□□□ -0.01
RAB5C-207ENST00000550504 TRPM2O94759 1503 aa14.97□□□□□ -0.01
RAB5C-207ENST00000550504 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
RAB5C-207ENST00000550504 UGGT1Q9NYU2 1555 aa14.96□□□□□ -0.01
RAB5C-207ENST00000550504 SYNMO15061 1565 aa14.95□□□□□ -0.02
RAB5C-207ENST00000550504 NOS1P29475 1434 aa14.95□□□□□ -0.02
RAB5C-207ENST00000550504 FBXO41Q8TF61 875 aa14.95□□□□□ -0.02
RAB5C-207ENST00000550504 LMTK3Q96Q04 1460 aa14.95□□□□□ -0.02
RAB5C-207ENST00000550504 CLTCL1P53675 1640 aa14.94□□□□□ -0.02
RAB5C-207ENST00000550504 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
RAB5C-207ENST00000550504 TNRQ92752 1358 aa14.91□□□□□ -0.02
RAB5C-207ENST00000550504 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
RAB5C-207ENST00000550504 IDI1Q13907 227 aa14.9□□□□□ -0.02
RAB5C-207ENST00000550504 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
RAB5C-207ENST00000550504 PIK3C2BO00750 1634 aa14.88□□□□□ -0.03
RAB5C-207ENST00000550504 RGL3Q3MIN7 710 aa14.88□□□□□ -0.03
RAB5C-207ENST00000550504 SLC52A1Q9NWF4 448 aa14.88□□□□□ -0.03
RAB5C-207ENST00000550504 KIF1BO60333 1816 aa14.87□□□□□ -0.03
RAB5C-207ENST00000550504 ZEB1P37275 1124 aaPredicted RBP14.85□□□□□ -0.03
RAB5C-207ENST00000550504 L3MBTL2Q969R5 705 aa14.85□□□□□ -0.03
RAB5C-207ENST00000550504 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
RAB5C-207ENST00000550504 SPATA31E1Q6ZUB1 1445 aa14.84□□□□□ -0.03
RAB5C-207ENST00000550504 ADGRB3O60242 1522 aa14.84□□□□□ -0.03
RAB5C-207ENST00000550504 ZNF326Q5BKZ1 582 aaKnown RBP14.84□□□□□ -0.03
RAB5C-207ENST00000550504 NLRP1Q9C000 1473 aa14.83□□□□□ -0.03
RAB5C-207ENST00000550504 MYO3AQ8NEV4 1616 aa14.83□□□□□ -0.04
RAB5C-207ENST00000550504 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
RAB5C-207ENST00000550504 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
RAB5C-207ENST00000550504 DCAF11Q8TEB1 546 aa14.81□□□□□ -0.04
RAB5C-207ENST00000550504 TIMELESSQ9UNS1 1208 aa14.81□□□□□ -0.04
RAB5C-207ENST00000550504 KDM2AQ9Y2K7 1162 aa14.81□□□□□ -0.04
RAB5C-207ENST00000550504 A2ML1A8K2U0 1454 aa14.79□□□□□ -0.04
RAB5C-207ENST00000550504 NEURL4Q96JN8 1562 aa14.79□□□□□ -0.04
RAB5C-207ENST00000550504 UBR1Q8IWV7 1749 aa14.78□□□□□ -0.04
RAB5C-207ENST00000550504 CEP170BQ9Y4F5 1589 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-207ENST00000550504 SETD1BQ9UPS6 1966 aaKnown RBP14.77□□□□□ -0.04
RAB5C-207ENST00000550504 PPP1R15AO75807 674 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-207ENST00000550504 NUTM2DQ5VT03 806 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-207ENST00000550504 UHRF1BP1Q6BDS2 1440 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms